RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 LRRC23Q53EV4 343 aaPredicted RBP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 C6orf163Q5TEZ5 329 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.87■□□□□ 0.13
LRFN1-201ENST00000248668 LSMEM2Q8N112 164 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 ARHGAP18Q8N392 663 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 ARL10Q8N8L6 244 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 SNX31Q8N9S9 440 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 ANKRD49Q8WVL7 239 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 DRC3Q9H069 523 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 SSX2IPQ9Y2D8 614 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 ANKRD6Q9Y2G4 727 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 SQORQ9Y6N5 450 aa15.87■□□□□ 0.13
LRFN1-201ENST00000248668 TMEM114B3SHH9 223 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 LUC7L3O95232 432 aaKnown RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 LMNAP02545 664 aaKnown RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 DNAJB2P25686 324 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 HTR7P34969 479 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 RAP1GDS1P52306 607 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 ATXN3P54252 364 aaPredicted RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 SH2D4BQ5SQS7 431 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 LRRC74BQ6ZQY2 392 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 HPS6Q86YV9 775 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 KLHDC8BQ8IXV7 354 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 OR13C4Q8NGS5 318 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 SH3TC2Q8TF17 1288 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 DNAJC9Q8WXX5 260 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 CAPNS2Q96L46 248 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 CYP2S1Q96SQ9 504 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 RAP2CQ9Y3L5 183 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 NVLO15381 856 aaKnown RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 COX4I1P13073 169 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 ATF6P18850 670 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 SLC34A1Q06495 639 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 NOGQ13253 232 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 LBRQ14739 615 aaKnown RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 ARRDC2Q8TBH0 407 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 SCG3Q8WXD2 468 aaKnown RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 BHMTQ93088 406 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 IFT43Q96FT9 208 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 DNAJC1Q96KC8 554 aaKnown RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 GKN1Q9NS71 199 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 PPM1HQ9ULR3 514 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 A0A0U1RQS6 177 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 ARVCFO00192 962 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 MATN2O00339 956 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 TSPAN3O60637 253 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 ALOX15P16050 662 aaPredicted RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 TACR2P21452 398 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 PAX3P23760 479 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 SLC6A4P31645 630 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 DNAJC14Q6Y2X3 702 aaPredicted RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 SNX32Q86XE0 403 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 DENND1CQ8IV53 801 aa15.86■□□□□ 0.13
LRFN1-201ENST00000248668 MRPL46Q9H2W6 279 aaKnown RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 STN1Q9H668 368 aaKnown RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 HMX1Q9NP08 348 aaPredicted RBP15.86■□□□□ 0.13
LRFN1-201ENST00000248668 MIA3Q5JRA6 1907 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 PRRC2BQ5JSZ5 2229 aaKnown RBP15.85■□□□□ 0.13
LRFN1-201ENST00000248668 HDAC3O15379 428 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 GRID2O43424 1007 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 HADHAP40939 763 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 TRIM67Q6ZTA4 783 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 RNF148Q8N7C7 305 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 PHC3Q8NDX5 983 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 CREBZFQ9NS37 354 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 MID2Q9UJV3 735 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 RPL26L1Q9UNX3 145 aaKnown RBP15.85■□□□□ 0.13
LRFN1-201ENST00000248668 DOCK4Q8N1I0 1966 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 WASH4PA8MWX3 477 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 TARM1B6A8C7 271 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 CFLARO15519 480 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 APOA4P06727 396 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 GALTP07902 379 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 ITGAXP20702 1163 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 TPP2P29144 1249 aaPredicted RBP15.85■□□□□ 0.13
LRFN1-201ENST00000248668 OR1D2P34982 312 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 NUDT2P50583 147 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 CDKN2DP55273 166 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 SERINC3Q13530 473 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 MRPL58Q14197 206 aaKnown RBP15.85■□□□□ 0.13
LRFN1-201ENST00000248668 GPR158Q5T848 1215 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 FAM117BQ6P1L5 589 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 TMCO2Q7Z6W1 182 aaPredicted RBP15.85■□□□□ 0.13
LRFN1-201ENST00000248668 SLC26A7Q8TE54 656 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 CMTM5Q96DZ9 223 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 ALG9Q9H6U8 611 aa15.85■□□□□ 0.13
LRFN1-201ENST00000248668 OR6C75A6NL08 312 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 VHLP40337 213 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 MAGEA11P43364 429 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 CSRP3P50461 194 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 ASPHQ12797 758 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 GPR17Q13304 367 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 PTPRRQ15256 657 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 FBXO48Q5FWF7 155 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 HECTD2Q5U5R9 776 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 C16orf59Q7L2K0 433 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 ARMCX6Q7L4S7 300 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 GALNT15Q8N3T1 639 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 UCMAQ8WVF2 138 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 PRKD2Q9BZL6 878 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms