RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PGBD5Q8N414 524 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 PHC3Q8NDX5 983 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 MOCOSQ96EN8 888 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 B3GALT6Q96L58 329 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 CENPKQ9BS16 269 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 MIA3Q5JRA6 1907 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 ENPP3O14638 875 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 SLC7A4O43246 635 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 NPHS1O60500 1241 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 RAMP2O60895 175 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 SNUPNO95149 360 aaKnown RBP22.06■■□□□ 1.12
RNF39-201ENST00000244360 TFEBP19484 476 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 CCR10P46092 362 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 MAPKAPK2P49137 400 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 YBEYP58557 167 aaPredicted RBP22.06■■□□□ 1.12
RNF39-201ENST00000244360 DNAJB13P59910 316 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 NSUN2Q08J23 767 aaKnown RBP eCLIP22.06■■□□□ 1.12
RNF39-201ENST00000244360 SMARCB1Q12824 385 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 GDPD5Q8WTR4 605 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 HEXDCQ8WVB3 486 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 CCDC124Q96CT7 223 aaKnown RBP22.06■■□□□ 1.12
RNF39-201ENST00000244360 TUBGCP5Q96RT8 1024 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 STARD7Q9NQZ5 370 aa22.06■■□□□ 1.12
RNF39-201ENST00000244360 GREB1Q4ZG55 1949 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 LOC285095A0A1B0GVY8 99 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 SLC12A8A0AV02 714 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 ATXN1LP0C7T5 689 aaKnown RBP22.05■■□□□ 1.12
RNF39-201ENST00000244360 SLC12A2P55011 1212 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 ITKQ08881 620 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 MTA1Q13330 715 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 POLD3Q15054 466 aaPredicted RBP22.05■■□□□ 1.12
RNF39-201ENST00000244360 RBM20Q5T481 1227 aaKnown RBP22.05■■□□□ 1.12
RNF39-201ENST00000244360 RSPO2Q6UXX9 243 aaPredicted RBP22.05■■□□□ 1.12
RNF39-201ENST00000244360 KBTBD6Q86V97 674 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 SHKBP1Q8TBC3 707 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 AGR3Q8TD06 166 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 BTBD9Q96Q07 612 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 ZNF385DQ9H6B1 395 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 BCAP29Q9UHQ4 241 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 ZDHHC2Q9UIJ5 367 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 ADAMTS6Q9UKP5 1117 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 SLC27A5Q9Y2P5 690 aa22.05■■□□□ 1.12
RNF39-201ENST00000244360 LOC100653049A0A140TA62 436 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 CLGNO14967 610 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 KRT34O76011 436 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 HOXD10P28358 340 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 SERPINB5P36952 375 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 SLC11A1P49279 550 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 GPNMBQ14956 572 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 C11orf91Q3C1V1 193 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 ZNF789Q5FWF6 425 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 RNF111Q6ZNA4 994 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 HPS6Q86YV9 775 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 RPRD1AQ96P16 312 aaPredicted RBP22.04■■□□□ 1.12
RNF39-201ENST00000244360 OLFM1Q99784 485 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 SHCBP1LQ9BZQ2 653 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 MFSD1Q9H3U5 465 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 ARVCFO00192 962 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 NBNO60934 754 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 ZCCHC18P0CG32 403 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 RAG1P15918 1043 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 ARPP19P56211 112 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 MGAT5BQ3V5L5 792 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 SIRPB2Q5JXA9 342 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 NADSYN1Q6IA69 706 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 RNF19BQ6ZMZ0 732 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 PIWIL4Q7Z3Z4 852 aaKnown RBP22.04■■□□□ 1.12
RNF39-201ENST00000244360 CILP2Q8IUL8 1156 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 CPSF7Q8N684 471 aaKnown RBP22.04■■□□□ 1.12
RNF39-201ENST00000244360 TXNDC5Q8NBS9 432 aaKnown RBP22.04■■□□□ 1.12
RNF39-201ENST00000244360 PXYLP1Q8TE99 480 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 WDR55Q9H6Y2 383 aaPredicted RBP22.04■■□□□ 1.12
RNF39-201ENST00000244360 ACSS2Q9NR19 701 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 C6orf203Q9P0P8 240 aaPredicted RBP22.04■■□□□ 1.12
RNF39-201ENST00000244360 UXTQ9UBK9 157 aaPredicted RBP22.04■■□□□ 1.12
RNF39-201ENST00000244360 PCDHB7Q9Y5E2 793 aa22.04■■□□□ 1.12
RNF39-201ENST00000244360 EME2A4GXA9 379 aaPredicted RBP22.03■■□□□ 1.12
RNF39-201ENST00000244360 PRAMEF11O60813 436 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 ALDH2P05091 517 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 ATP5F1P24539 256 aaPredicted RBP22.03■■□□□ 1.12
RNF39-201ENST00000244360 NOGQ13253 232 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 LSM12Q3MHD2 195 aaKnown RBP22.03■■□□□ 1.12
RNF39-201ENST00000244360 SFT2D3Q587I9 215 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 TECRLQ5HYJ1 363 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 FUT10Q6P4F1 479 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 CIR1Q86X95 450 aaPredicted RBP22.03■■□□□ 1.12
RNF39-201ENST00000244360 SPATA6LQ8N4H0 392 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 RP9Q8TA86 221 aaKnown RBP22.03■■□□□ 1.12
RNF39-201ENST00000244360 C2orf15Q8WU43 125 aaKnown RBP22.03■■□□□ 1.12
RNF39-201ENST00000244360 MYEOVQ96EZ4 313 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 TSPAN17Q96FV3 270 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 SEPT5Q99719 369 aaPredicted RBP22.03■■□□□ 1.12
RNF39-201ENST00000244360 TRIM4Q9C037 500 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 PIDD1Q9HB75 910 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 STK39Q9UEW8 545 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 VPS28Q9UK41 221 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 RGSL1A5PLK6 1076 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 RNASEH1O60930 286 aaKnown RBP22.03■■□□□ 1.12
RNF39-201ENST00000244360 HMBSP08397 361 aa22.03■■□□□ 1.12
RNF39-201ENST00000244360 PBX3P40426 434 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms