RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 IFT81Q8WYA0 676 aa20.27■□□□□ 0.83
SNRPA-201ENST00000243563 SERPINB12Q96P63 405 aa20.27■□□□□ 0.83
SNRPA-201ENST00000243563 C11orf16Q9NQ32 467 aa20.27■□□□□ 0.83
SNRPA-201ENST00000243563 EBF1Q9UH73 591 aa20.27■□□□□ 0.83
SNRPA-201ENST00000243563 SHOC2Q9UQ13 582 aa20.27■□□□□ 0.83
SNRPA-201ENST00000243563 ITM2BQ9Y287 266 aa20.27■□□□□ 0.83
SNRPA-201ENST00000243563 A0A1W2PP55 124 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 A8MX80 341 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 K7ESF4 209 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 P2RY2P41231 377 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 DGKEP52429 567 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 CRADDP78560 199 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 CERCAMQ5T4B2 595 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 PIP5KL1Q5T9C9 394 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 NAPEPLDQ6IQ20 393 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 HOOK3Q86VS8 718 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 MPP5Q8N3R9 675 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 MCUQ8NE86 351 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 UBXN4Q92575 508 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 PBXIP1Q96AQ6 731 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 RMDN1Q96DB5 314 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 SIPA1Q96FS4 1042 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 PPP1R2P1Q96PQ5 205 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 WDR83Q9BRX9 315 aaKnown RBP20.26■□□□□ 0.83
SNRPA-201ENST00000243563 PABPC3Q9H361 631 aaKnown RBP20.26■□□□□ 0.83
SNRPA-201ENST00000243563 DKK3Q9UBP4 350 aa20.26■□□□□ 0.83
SNRPA-201ENST00000243563 GOLGA6CA6NDK9 693 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 GOLGA6BA6NDN3 693 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 ANKRD66B4E2M5 251 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 C1QTNF3-AMACRE9PGA6 284 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 PSMD3O43242 534 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 EPOP01588 193 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 GOLGA6DP0CG33 693 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 MAGEA3P43357 314 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 DMWDQ09019 674 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 UGP2Q16851 508 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 AGBL4Q5VU57 503 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 DENND2CQ68D51 928 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 CCDC70Q6NSX1 233 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 PPP1R21Q6ZMI0 780 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 PCGF5Q86SE9 256 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 TSPAN33Q86UF1 283 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 TSTD1Q8NFU3 115 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 SPOCK2Q92563 424 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 FBRSQ9HAH7 460 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 ARNT2Q9HBZ2 717 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 POLMQ9NP87 494 aaPredicted RBP20.25■□□□□ 0.83
SNRPA-201ENST00000243563 FAM114A2Q9NRY5 505 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 GOLGA6AQ9NYA3 693 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 NFU1Q9UMS0 254 aa20.25■□□□□ 0.83
SNRPA-201ENST00000243563 ARIH1Q9Y4X5 557 aaPredicted RBP20.25■□□□□ 0.83
SNRPA-201ENST00000243563 A0A0J9YYE9 177 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 NPIPB15A6NHN6 443 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-201ENST00000243563 UPK3BL1B0FP48 263 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 UPK3BL2E5RIL1 263 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 AURKAO14965 403 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 RNASEH1O60930 286 aaKnown RBP20.24■□□□□ 0.83
SNRPA-201ENST00000243563 ADH1BP00325 375 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 TRBC1P01850 177 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 ADRB3P13945 408 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 HLA-DPA1P20036 260 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 C5AR1P21730 350 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 HNF1BP35680 557 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 CLCN5P51795 746 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 SESN2P58004 480 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-201ENST00000243563 TAS2R38P59533 333 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 VSNL1P62760 191 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 CALCOCO2Q13137 446 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 ELF2Q15723 593 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 LRRC8BQ6P9F7 803 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 BRAT1Q6PJG6 821 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 TSSK4Q6SA08 328 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 HDDC3Q8N4P3 179 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 TRIM56Q9BRZ2 755 aaKnown RBP20.24■□□□□ 0.83
SNRPA-201ENST00000243563 TPSD1Q9BZJ3 242 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 PCDH12Q9NPG4 1184 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 TNFRSF10AO00220 468 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 FGF1P05230 155 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 CA4P22748 312 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 LHCGRP22888 699 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 MGAT1P26572 445 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 GRIA4P48058 902 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 CDK16Q00536 496 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 CDKN3Q16667 212 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 CFAP58Q5T655 872 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 FAM46CQ5VWP2 391 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-201ENST00000243563 ERN2Q76MJ5 926 aaKnown RBP20.24■□□□□ 0.83
SNRPA-201ENST00000243563 PAF1Q8N7H5 531 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 FRMD1Q8N878 549 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 MCCC1Q96RQ3 725 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-201ENST00000243563 HDAC8Q9BY41 377 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 B4GALT6Q9UBX8 382 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 PHTF1Q9UMS5 762 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 PPIL1Q9Y3C6 166 aa20.24■□□□□ 0.83
SNRPA-201ENST00000243563 PLXND1Q9Y4D7 1925 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 ZDBF2Q9HCK1 2354 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 RNASEH2AO75792 299 aaKnown RBP20.23■□□□□ 0.83
SNRPA-201ENST00000243563 DNTTP04053 509 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 EPHB1P54762 984 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms