RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MAGEA3P43357 314 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 PSMC4P43686 418 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SERPINB9P50453 376 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 CCNG1P51959 295 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SCAND1P57086 179 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 ERVK-21P61565 698 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 YWHAGP61981 247 aaKnown RBP eCLIP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 YWHAZP63104 245 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 CDK16Q00536 496 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 NFATC3Q12968 1075 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 C15orf59Q2T9L4 293 aaPredicted RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 KBTBD12Q3ZCT8 623 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 FAM91A1Q658Y4 838 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SLC27A1Q6PCB7 646 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 NPNTQ6UXI9 565 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 TMC5Q6UXY8 1006 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 BZW1Q7L1Q6 419 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 NLRP9Q7RTR0 991 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 RTN4RL1Q86UN2 441 aaPredicted RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 LRRC6Q86X45 466 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 DTX3Q8N9I9 347 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 RAB3IL1Q8TBN0 382 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SNX27Q96L92 541 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 HSFY1Q96LI6 401 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 C11orf84Q9BUA3 381 aaPredicted RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SNRNP25Q9BV90 132 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 GCOM2Q9BZD3 368 aaPredicted RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SLC13A1Q9BZW2 595 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 KATNBL1Q9H079 304 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 TLE6Q9H808 572 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 C10orf88Q9H8K7 445 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 POPDC2Q9HBU9 364 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 XAB2Q9HCS7 855 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 ETNK2Q9NVF9 386 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 UCKL1Q9NWZ5 548 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 MTO1Q9Y2Z2 717 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 TTLL3Q9Y4R7 772 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SBF1O95248 1867 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 PAPSS1O43252 624 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 XPOTO43592 962 aaKnown RBP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 APOL3O95236 402 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 PRLP01236 227 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 CD4P01730 458 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 FAM163BP0C2L3 166 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 MLNP12872 115 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 CNTFP26441 200 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 PNPLA4P41247 253 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 GCLCP48506 637 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 BCAT1P54687 386 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 HDAC4P56524 1084 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 SARNPP82979 210 aaKnown RBP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 BST2Q10589 180 aaKnown RBP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 DUSP28Q4G0W2 176 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 WASHC2DQ5SRD0 308 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 KIAA1841Q6NSI8 718 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 PMF1Q6P1K2 205 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 PGM2L1Q6PCE3 622 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 C1orf228Q6PIY5 440 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 STRADAQ7RTN6 431 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 TTC30AQ86WT1 665 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 CXorf67Q86X51 503 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 IGDCC3Q8IVU1 814 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 HACE1Q8IYU2 909 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 VPS52Q8N1B4 723 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 CRYBG2Q8N1P7 616 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 ANKRD52Q8NB46 1076 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 AGAP11Q8TF27 550 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 ZBTB10Q96DT7 871 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 PIWIL1Q96J94 861 aaKnown RBP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 QKIQ96PU8 341 aaKnown RBP eCLIP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 TSSK1BQ9BXA7 367 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 NRDE2Q9H7Z3 1164 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 MORF4L1Q9UBU8 362 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 FBXO10Q9UK96 956 aa8.04□□□□□ -1.12
CXCR4-201ENST00000241393 UBQLN1Q9UMX0 589 aaKnown RBP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 G3BP2Q9UN86 482 aaKnown RBP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 SF3B1O75533 1304 aaKnown RBP eCLIP8.04□□□□□ -1.12
CXCR4-201ENST00000241393 MYOCOSA0A1B0GUC4 107 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 GABRDO14764 452 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 KRT38O76015 456 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 APOEP02649 317 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 MMP3P08254 477 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 T-ENOLP0DO92 83 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 CYP2F1P24903 491 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 RBL1P28749 1068 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 PTPN4P29074 926 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 ADORA2AP29274 412 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 FDFT1P37268 417 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 NAB1Q13506 487 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 SEMA5AQ13591 1074 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 KRT72Q14CN4 511 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 PRKD1Q15139 912 aaPredicted RBP8.03□□□□□ -1.12
CXCR4-201ENST00000241393 FSCN1Q16658 493 aaKnown RBP8.03□□□□□ -1.12
CXCR4-201ENST00000241393 DGKDQ16760 1214 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 CDO1Q16878 200 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 UGT8Q16880 541 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 MARCH8Q5T0T0 291 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 STXBP5Q5T5C0 1151 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 SCYL2Q6P3W7 929 aa8.03□□□□□ -1.12
CXCR4-201ENST00000241393 NOTUMQ6P988 496 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms