RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 JADE3Q92613 823 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 FAM136AQ96C01 138 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 SEZ6LQ9BYH1 1024 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 NUF2Q9BZD4 464 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 PDFQ9HBH1 243 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 PHF24Q9UPV7 400 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 LRCH1Q9Y2L9 728 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 VWA7Q9Y334 891 aa16.27■□□□□ 0.2
UBE3D-201ENST00000237186 CEP350Q5VT06 3117 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 FGF1P05230 155 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 TACR2P21452 398 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 OR1E1P30953 314 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 PPARGP37231 505 aaPredicted RBP16.27■□□□□ 0.19
UBE3D-201ENST00000237186 ARPP19P56211 112 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 SATB1Q01826 763 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 DUSP4Q13115 394 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 CUL3Q13618 768 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 SH2D4BQ5SQS7 431 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 ANO7Q6IWH7 933 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 ANKS3Q6ZW76 656 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 FBXW8Q8N3Y1 598 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 AGR3Q8TD06 166 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 HDAC10Q969S8 669 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 FAR2Q96K12 515 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 B3GALT6Q96L58 329 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 SEPT5Q99719 369 aaPredicted RBP16.27■□□□□ 0.19
UBE3D-201ENST00000237186 S100A14Q9HCY8 104 aa16.27■□□□□ 0.19
UBE3D-201ENST00000237186 GOLGA8QA0A0J9YX86 632 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 GOLGA8OA6NCC3 632 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 TRPC5OSA6NMA1 111 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 GOLGA8NF8WBI6 632 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 HOXA2O43364 376 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 IPO13O94829 963 aaKnown RBP16.26■□□□□ 0.19
UBE3D-201ENST00000237186 GALTP07902 379 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 HOXB8P17481 243 aaPredicted RBP16.26■□□□□ 0.19
UBE3D-201ENST00000237186 ACVRL1P37023 503 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 ARSDP51689 593 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 CSHL1Q14406 222 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 RTP2Q5QGT7 225 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 KLC3Q6P597 504 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 MYEOVQ96EZ4 313 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 NDNQ99608 321 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 SEMA3CQ99985 751 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 OSBPL1AQ9BXW6 950 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 CCSER2Q9H7U1 834 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 ACSS2Q9NR19 701 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 MRGBPQ9NV56 204 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 VPS28Q9UK41 221 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 CORO1CQ9ULV4 474 aaPredicted RBP16.26■□□□□ 0.19
UBE3D-201ENST00000237186 PRPF19Q9UMS4 504 aaKnown RBP16.26■□□□□ 0.19
UBE3D-201ENST00000237186 POMPQ9Y244 141 aa16.26■□□□□ 0.19
UBE3D-201ENST00000237186 SLC38A8A6NNN8 435 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 MAP3K7O43318 606 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 FKTNO75072 461 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 PRAMEP78395 509 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 TBL3Q12788 808 aaKnown RBP16.25■□□□□ 0.19
UBE3D-201ENST00000237186 BFSP2Q13515 415 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 PTAR1Q7Z6K3 402 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-201ENST00000237186 CIR1Q86X95 450 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-201ENST00000237186 ZNF354CQ86Y25 554 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 SLC22A9Q8IVM8 553 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 CCNYL1Q8N7R7 359 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 SLAIN1Q8ND83 568 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 BRSK1Q8TDC3 778 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 ZNF296Q8WUU4 475 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-201ENST00000237186 TTPALQ9BTX7 342 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 SHCBP1LQ9BZQ2 653 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 MAGEH1Q9H213 219 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 POMKQ9H5K3 350 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 HMX1Q9NP08 348 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-201ENST00000237186 NDE1Q9NXR1 346 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 A8MT66 165 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 F5H5T6 163 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 MUSKO15146 869 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 ACSL4O60488 711 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 HMBSP08397 361 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 CCDC166P0CW27 439 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 GATMP50440 423 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 HTRA3P83110 453 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 CYLC2Q14093 348 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-201ENST00000237186 CCNIQ14094 377 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 ARHGEF6Q15052 776 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 FAM45BPQ6NSW5 357 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 KIRREL3Q8IZU9 778 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 OR6P1Q8NGX9 317 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 SHKBP1Q8TBC3 707 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 FAM45AQ8TCE6 357 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 OVCA2Q8WZ82 227 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 IFT43Q96FT9 208 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 ZNF184Q99676 751 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-201ENST00000237186 TRMOQ9BU70 441 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 MRPL9Q9BYD2 267 aaKnown RBP16.25■□□□□ 0.19
UBE3D-201ENST00000237186 EML4Q9HC35 981 aaKnown RBP16.25■□□□□ 0.19
UBE3D-201ENST00000237186 ZBTB26Q9HCK0 441 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 DNMT3LQ9UJW3 386 aa16.25■□□□□ 0.19
UBE3D-201ENST00000237186 MYO16Q9Y6X6 1858 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 TTC24A2A3L6 582 aaPredicted RBP16.24■□□□□ 0.19
UBE3D-201ENST00000237186 NEMP1O14524 444 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 JUNP05412 331 aaKnown RBP16.24■□□□□ 0.19
UBE3D-201ENST00000237186 ATF6P18850 670 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms