RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 NR3C2P08235 984 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 FAM228BP0C875 321 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 TOR1AIP1Q5JTV8 583 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 KCT2Q8NC54 265 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 TOP1MTQ969P6 601 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 NLRP1Q9C000 1473 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 SDR42E2A6NKP2 422 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 SNAP91O60641 907 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 SASH3O75995 380 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 FAUP35544 74 aaKnown RBP11.16□□□□□ -0.62
MSH6-201ENST00000234420 HGSNATQ68CP4 663 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 TMEM132CQ8N3T6 1108 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 ARHGAP28Q9P2N2 729 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.16□□□□□ -0.629e-8■■■■□ 21.9
MSH6-201ENST00000234420 CHD4Q14839 1912 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 MYH8P13535 1937 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 CLTCQ00610 1675 aaKnown RBP11.16□□□□□ -0.62
MSH6-201ENST00000234420 CYP2A7P20853 494 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 VARSP26640 1264 aaKnown RBP11.16□□□□□ -0.62
MSH6-201ENST00000234420 NOS2P35228 1153 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 IFNGR2P38484 337 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 LIFRP42702 1097 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 MC1RQ01726 317 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 PPP1R15BQ5SWA1 713 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 ZZZ3Q8IYH5 903 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 GPAMQ9HCL2 828 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 GNSP15586 552 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 TPH1P17752 444 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 BCL2L1Q07817 233 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 PON2Q15165 354 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 PFKFB3Q16875 520 aaPredicted RBP11.16□□□□□ -0.62
MSH6-201ENST00000234420 LINC00523Q86TU6 105 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 GTF3C2Q8WUA4 911 aaPredicted RBP11.16□□□□□ -0.62
MSH6-201ENST00000234420 DIRAS2Q96HU8 199 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 PPP1R16AQ96I34 528 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 PFDN5Q99471 154 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 THAP2Q9H0W7 228 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 VANGL2Q9ULK5 521 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 ZDHHC9Q9Y397 364 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 ZNF451Q9Y4E5 1061 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 MYH6P13533 1939 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 NRP2O60462 931 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 RPA3P35244 121 aaPredicted RBP11.16□□□□□ -0.62
MSH6-201ENST00000234420 CCNYL2Q5T2Q4 361 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 SLC26A11Q86WA9 606 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 FBXO15Q8NCQ5 510 aaPredicted RBP11.16□□□□□ -0.62
MSH6-201ENST00000234420 FAM20AQ96MK3 541 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 RACGAP1Q9H0H5 632 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 IMP3Q9NV31 184 aaKnown RBP11.16□□□□□ -0.62
MSH6-201ENST00000234420 POU2F3Q9UKI9 436 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 ANKDD1BA6NHY2 528 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 WWP2O00308 870 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 CCNE2O96020 404 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 FAM86B2P0C5J1 330 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 CCNOP22674 350 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 GRK5P34947 590 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 PGDP52209 483 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 TBX4P57082 545 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 TEAD4Q15561 434 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 SGCBQ16585 318 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 TTI2Q6NXR4 508 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 PCDH19Q8TAB3 1148 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 METTL21AQ8WXB1 218 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 LPAR1Q92633 364 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 RAD51AP1Q96B01 352 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 WRAP53Q9BUR4 548 aaKnown RBP11.16□□□□□ -0.62
MSH6-201ENST00000234420 OVOS2A0A0G2JMS6 1433 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 OVOS2A0A0J9YW53 1432 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 OVOS2Q6IE36 1432 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 ZNF208O43345 1280 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 AP2A2O94973 939 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 HLA-DRAP01903 254 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 HTR1BP28222 390 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 FMO4P31512 558 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 USP41Q3LFD5 358 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 FAM220AQ7Z4H9 259 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 TTC39CQ8N584 583 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 OR52K2Q8NGK3 314 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 FEZF2Q8TBJ5 459 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 AKAP1Q92667 903 aaKnown RBP eCLIP11.15□□□□□ -0.62
MSH6-201ENST00000234420 TMEM121Q9BTD3 319 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 TMEM253P0C7T8 217 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 MPP3Q13368 585 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 MRNIPQ6NTE8 343 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 CAVIN3Q969G5 261 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 ZNF558Q96NG5 402 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 PLEKHF1Q96S99 279 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 REEP2Q9BRK0 252 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 METTL8Q9H825 291 aaKnown RBP11.15□□□□□ -0.62
MSH6-201ENST00000234420 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 TMEM114B3SHH9 223 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 RIPK2O43353 540 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 CPNE6O95741 557 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 IFNA6P05013 189 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 S100GP29377 79 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 RXRGP48443 463 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 PIK3CGP48736 1102 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 SLFN11Q7Z7L1 901 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 ZBTB8BQ8NAP8 495 aaPredicted RBP11.15□□□□□ -0.62
MSH6-201ENST00000234420 NXNL1Q96CM4 212 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms