RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 KDM7AQ6ZMT4 941 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 PEX26Q7Z412 305 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 TMEM145Q8NBT3 493 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 HCAR2Q8TDS4 363 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 CXorf40AQ8TE69 158 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 PDCD6IPQ8WUM4 868 aaKnown RBP12.78□□□□□ -0.36
LSM5-201ENST00000223084 FATE1Q969F0 183 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 C1QTNF2Q9BXJ5 285 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 ZDHHC5Q9C0B5 715 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 SEPT10Q9P0V9 454 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 AMFRQ9UKV5 643 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 ATP8A1Q9Y2Q0 1164 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 COQ6Q9Y2Z9 468 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 DCHS1Q96JQ0 3298 aa12.78□□□□□ -0.36
LSM5-201ENST00000223084 CCDC66A2RUB6 948 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 A8MX80 341 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 TLR4O00206 839 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 PPP1R12AO14974 1030 aaPredicted RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 DDX3YO15523 660 aaKnown RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 HTRA2O43464 458 aaPredicted RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 PYGMP11217 842 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 SDHBP21912 280 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 TGM2P21980 687 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 AKT2P31751 481 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 FAM193AP78312 1265 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 IFI35P80217 286 aaPredicted RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 IL9RQ01113 521 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 ELP6Q0PNE2 266 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 SGCGQ13326 291 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 ZNF211Q13398 564 aaPredicted RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 PTPRRQ15256 657 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 PPP2R5EQ16537 467 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 SLC45A4Q5BKX6 768 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 IL27RAQ6UWB1 636 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 GCNT7Q6ZNI0 430 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 BBS12Q6ZW61 710 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 ZC3H18Q86VM9 953 aaKnown RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 SPATS2Q86XZ4 545 aaKnown RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 SYCE1Q8N0S2 351 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 CNTD1Q8N815 330 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 MFSD2AQ8NA29 543 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 ARRDC2Q8TBH0 407 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 P3H4Q92791 437 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 IL12RB2Q99665 862 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 OSBPL8Q9BZF1 889 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 TSGA10Q9BZW7 698 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 POLR1EQ9GZS1 481 aaKnown RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 C10orf88Q9H8K7 445 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 LZTFL1Q9NQ48 299 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 DNAAF2Q9NVR5 837 aaKnown RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 PCDHB9Q9Y5E1 797 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 RAI2Q9Y5P3 530 aa12.77□□□□□ -0.37
LSM5-201ENST00000223084 TDRD6O60522 2096 aaKnown RBP12.77□□□□□ -0.37
LSM5-201ENST00000223084 POM121BA6NF01 834 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 GOLGA8CPA6NN73 597 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 KRT86O43790 486 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 SOCS5O75159 536 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 CER1O95813 267 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 CPP00450 1065 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 PDHA1P08559 390 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 CD59P13987 128 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 MMP12P39900 470 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 NR2C2P49116 596 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 LIG3P49916 1009 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 SUOXP51687 545 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 NXPH1P58417 271 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 COPS2P61201 443 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 PRKD1Q15139 912 aaPredicted RBP12.76□□□□□ -0.37
LSM5-201ENST00000223084 ERAP2Q6P179 960 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 DGLUCYQ7Z3D6 616 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 RNF10Q8N5U6 811 aaKnown RBP12.76□□□□□ -0.37
LSM5-201ENST00000223084 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 SKA1Q96BD8 255 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 KLHDC7BQ96G42 594 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 BMFQ96LC9 184 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 AGAP3Q96P47 875 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 SMIM14Q96QK8 99 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 KLF6Q99612 283 aaPredicted RBP12.76□□□□□ -0.37
LSM5-201ENST00000223084 FAM118BQ9BPY3 351 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 CAAP1Q9H8G2 361 aa12.76□□□□□ -0.37
LSM5-201ENST00000223084 A0A0U1RQS6 177 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 GIPC1O14908 333 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 KRT37O76014 449 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 TM7SF2O76062 418 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 PGLSO95336 258 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 MMP2P08253 660 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 CCDC175P0C221 793 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 THEGLP0DJG4 465 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 C6P13671 934 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 CTPS1P17812 591 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 CD86P42081 329 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 POLR2LP62875 67 aaKnown RBP12.75□□□□□ -0.37
LSM5-201ENST00000223084 RALGDSQ12967 914 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 ZNF423Q2M1K9 1284 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 RALGPS1Q5JS13 557 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 ARMC12Q5T9G4 340 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 CCDC181Q5TID7 509 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 ALG1LQ6GMV1 187 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 Q6ZSR6 202 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms