RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 FBXO30Q8TB52 745 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 DNAJB14Q8TBM8 379 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 RORBQ92753 470 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 MECRQ9BV79 373 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 PALMDQ9NP74 551 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 XPNPEP1Q9NQW7 623 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 USP2O75604 605 aaPredicted RBP11.58□□□□□ -0.56
NOD1-201ENST00000222823 CDKN2BP42772 138 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 GUCA1AP43080 201 aaPredicted RBP11.58□□□□□ -0.56
NOD1-201ENST00000222823 ATP6V0D1P61421 351 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 TAF10Q12962 218 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 NRF1Q16656 503 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 CRELD2Q6UXH1 353 aaPredicted RBP11.58□□□□□ -0.56
NOD1-201ENST00000222823 CASP12Q6UXS9 341 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 RDH11Q8TC12 318 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 PPP1R16AQ96I34 528 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 OSBPL7Q9BZF2 842 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 PRKAG3Q9UGI9 489 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 NCKAP1Q9Y2A7 1128 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 CLUHO75153 1309 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 ABCA3Q99758 1704 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 KPNA5O15131 536 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 FAM20BO75063 409 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 BCL10O95999 233 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 THOP1P52888 689 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 SQLEQ14534 574 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 ALFQ53S48 1182 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 PMF1Q6P1K2 205 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 SERPINA13PQ6UXR4 307 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 METTL3Q86U44 580 aaKnown RBP11.57□□□□□ -0.56
NOD1-201ENST00000222823 C10orf107Q8IVU9 208 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 DPP10Q8N608 796 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 OR4L1Q8NH43 312 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 PPP3R2Q96LZ3 170 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 QRFPRQ96P65 431 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 FIZ1Q96SL8 496 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 PDZD7Q9H5P4 517 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 ZFP14Q9HCL3 533 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 SLC17A7Q9P2U7 560 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 LEF1Q9UJU2 399 aaPredicted RBP11.57□□□□□ -0.56
NOD1-201ENST00000222823 PADI3Q9ULW8 664 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 PCDHGC3Q9UN70 934 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 GTF2A1LQ9UNN4 478 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 TPRKBQ9Y3C4 175 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 SERPINI2O75830 405 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 NAA20P61599 178 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 CCDC157Q569K6 752 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 CLVS1Q8IUQ0 354 aaPredicted RBP11.57□□□□□ -0.56
NOD1-201ENST00000222823 CLYBLQ8N0X4 340 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 SLC4A11Q8NBS3 891 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 SLC44A1Q8WWI5 657 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 NACC2Q96BF6 587 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 COPS8Q99627 209 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 TTPALQ9BTX7 342 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 LRMDAQ9H2I8 198 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 RIBC2Q9H4K1 309 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 IGFLR1Q9H665 355 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 REEP1Q9H902 201 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 ZNF536O15090 1300 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 A0A087WXM4 84 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 CD3EAPO15446 510 aaKnown RBP11.57□□□□□ -0.56
NOD1-201ENST00000222823 MSI1O43347 362 aaKnown RBP11.57□□□□□ -0.56
NOD1-201ENST00000222823 KCNH1O95259 989 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 SERPINA6P08185 405 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 NOS3P29474 1203 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 RXRGP48443 463 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 USP39Q53GS9 565 aaKnown RBP11.57□□□□□ -0.56
NOD1-201ENST00000222823 DET1Q7L5Y6 550 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 ADHFE1Q8IWW8 467 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 CYP4Z2PQ8N1L4 340 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 RP9Q8TA86 221 aaKnown RBP11.57□□□□□ -0.56
NOD1-201ENST00000222823 PROX1Q92786 737 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 TRAPPC9Q96Q05 1148 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 DCUN1D5Q9BTE7 237 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 GPR88Q9GZN0 384 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 PSME2Q9UL46 239 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 SLC12A4Q9UP95 1085 aa11.57□□□□□ -0.56
NOD1-201ENST00000222823 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 ZNF839A8K0R7 811 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 AZIN1O14977 448 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 GUCY1B2O75343 617 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 SNUPNO95149 360 aaKnown RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 CES1P23141 567 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 USP4Q13107 963 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 GALNT3Q14435 633 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 CPSF6Q16630 551 aaKnown RBP eCLIP11.56□□□□□ -0.56
NOD1-201ENST00000222823 EML3Q32P44 896 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 SLC44A4Q53GD3 710 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 INTS11Q5TA45 600 aaKnown RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 GPRIN3Q6ZVF9 776 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 SLC24A5Q71RS6 500 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 VN1R5Q7Z5H4 357 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 SVOPQ8N4V2 548 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 FIBCD1Q8N539 461 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 PLEKHO2Q8TD55 490 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 CPT1BQ92523 772 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 UBE2E3Q969T4 207 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 ERLEC1Q96DZ1 483 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 BTN2A3PQ96KV6 586 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms