RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 GREB1Q4ZG55 1949 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 MTMR11A4FU01 709 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 TBC1D4O60343 1298 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 PEX11BO96011 259 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 EPHA3P29320 983 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 PPARGP37231 505 aaPredicted RBP22.35■■□□□ 1.17
CCDC9-201ENST00000221922 NSUN2Q08J23 767 aaKnown RBP eCLIP22.35■■□□□ 1.17
CCDC9-201ENST00000221922 SEPT6Q14141 434 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 HERC3Q15034 1050 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 TRIP4Q15650 581 aaPredicted RBP22.35■■□□□ 1.17
CCDC9-201ENST00000221922 LRRC8EQ6NSJ5 796 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 TMC7Q7Z402 723 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 NPAS4Q8IUM7 802 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 CENPLQ8N0S6 344 aaPredicted RBP22.35■■□□□ 1.17
CCDC9-201ENST00000221922 LSMEM2Q8N112 164 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 CRIPAKQ8N1N5 446 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 PQLC1Q8N2U9 271 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 CALML6Q8TD86 181 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 KCTD4Q8WVF5 259 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 BTN2A3PQ96KV6 586 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 TMEM175Q9BSA9 504 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 MRPL9Q9BYD2 267 aaKnown RBP22.35■■□□□ 1.17
CCDC9-201ENST00000221922 SP110Q9HB58 689 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.35■■□□□ 1.17
CCDC9-201ENST00000221922 ZDHHC2Q9UIJ5 367 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 IGLV3-10A0A075B6K4 115 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 A0A087X1B8 175 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 CPB1P15086 417 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 SLC1A2P43004 574 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 CCR10P46092 362 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 NAGLUP54802 743 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 POLE2P56282 527 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 EFEMP1Q12805 493 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 CYLC2Q14093 348 aaPredicted RBP22.35■■□□□ 1.17
CCDC9-201ENST00000221922 MMEL1Q495T6 779 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 PIGGQ5H8A4 983 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 PPM1LQ5SGD2 360 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 MARC1Q5VT66 337 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 FSTL5Q8N475 847 aaPredicted RBP22.35■■□□□ 1.17
CCDC9-201ENST00000221922 HMCESQ96FZ2 354 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 B3GALT6Q96L58 329 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 CENPKQ9BS16 269 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 SPATA16Q9BXB7 569 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 ATP13A1Q9HD20 1204 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 TLR8Q9NR97 1041 aaKnown RBP22.35■■□□□ 1.17
CCDC9-201ENST00000221922 SLC2A6Q9UGQ3 507 aa22.35■■□□□ 1.17
CCDC9-201ENST00000221922 H7C4K7 107 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 NEMP1O14524 444 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 AP1G1O43747 822 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 FKTNO75072 461 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 AVPR1AP37288 418 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 ALDH1A3P47895 512 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 POU4F1Q01851 419 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 ZNF423Q2M1K9 1284 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 ZNF470Q6ECI4 717 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 EP400NLQ6ZTU2 488 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 TFAP2DQ7Z6R9 452 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 TMEM126BQ8IUX1 230 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 PIP4K2CQ8TBX8 421 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 NCSTNQ92542 709 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 NT5MQ9NPB1 228 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 FBXO5Q9UKT4 447 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 SERPINH1P50454 418 aaKnown RBP22.34■■□□□ 1.17
CCDC9-201ENST00000221922 SLC12A2P55011 1212 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 PCSK7Q16549 785 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 NEPROQ6NW34 567 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 BNC2Q6ZN30 1099 aaPredicted RBP22.34■■□□□ 1.17
CCDC9-201ENST00000221922 ICA1LQ8NDH6 482 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 C2orf15Q8WU43 125 aaKnown RBP22.34■■□□□ 1.17
CCDC9-201ENST00000221922 PDCD6IPQ8WUM4 868 aaKnown RBP22.34■■□□□ 1.17
CCDC9-201ENST00000221922 ELMO2Q96JJ3 720 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 GPR78Q96P69 363 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 NUF2Q9BZD4 464 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 ATXN3LQ9H3M9 355 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 ACSS2Q9NR19 701 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.34■■□□□ 1.17
CCDC9-201ENST00000221922 CDYLQ9Y232 598 aa22.34■■□□□ 1.17
CCDC9-201ENST00000221922 PAPSS2O95340 614 aaPredicted RBP22.33■■□□□ 1.17
CCDC9-201ENST00000221922 VNN2O95498 520 aa22.33■■□□□ 1.17
CCDC9-201ENST00000221922 HAPLN1P10915 354 aaPredicted RBP22.33■■□□□ 1.17
CCDC9-201ENST00000221922 CHRNA4P43681 627 aa22.33■■□□□ 1.17
CCDC9-201ENST00000221922 ARPP19P56211 112 aa22.33■■□□□ 1.17
CCDC9-201ENST00000221922 TNK2Q07912 1038 aa22.33■■□□□ 1.17
CCDC9-201ENST00000221922 PDK3Q15120 406 aa22.33■■□□□ 1.17
CCDC9-201ENST00000221922 GPR152Q8TDT2 470 aa22.33■■□□□ 1.17
CCDC9-201ENST00000221922 CDRT15Q96T59 188 aa22.33■■□□□ 1.17
CCDC9-201ENST00000221922 TRIM4Q9C037 500 aa22.33■■□□□ 1.17
CCDC9-201ENST00000221922 MRPL42Q9Y6G3 142 aaKnown RBP22.33■■□□□ 1.17
CCDC9-201ENST00000221922 TANC1Q9C0D5 1861 aa22.33■■□□□ 1.17
CCDC9-201ENST00000221922 DLX3O60479 287 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 SNUPNO95149 360 aaKnown RBP22.32■■□□□ 1.16
CCDC9-201ENST00000221922 IGLV3-27P01718 113 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 GLRBP48167 497 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 THOP1P52888 689 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 FOLH1Q04609 750 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 TAF10Q12962 218 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 MTA1Q13330 715 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 PSMD5Q16401 504 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 TCTN1Q2MV58 587 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 CNPY1Q3B7I2 92 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms