RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 EML4Q9HC35 981 aaKnown RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 DUS2Q9NX74 493 aaKnown RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 SLC39A10Q9ULF5 831 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 CNOT6Q9ULM6 557 aaKnown RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 ST3GAL5Q9UNP4 418 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 TRIP12Q14669 1992 aaPredicted RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 E7ENX8 843 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 STX16-NPEPL1H3BU86 382 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 DLX3O60479 287 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 ATP6V1G1O75348 118 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 SRP72O76094 671 aaKnown RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 RECQL4O94761 1208 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 THPOP40225 353 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 ZNF33AQ06730 810 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 USP10Q14694 798 aaKnown RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 GRM3Q14832 879 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 DLG2Q15700 870 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 TRIM71Q2Q1W2 868 aaKnown RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 TMEM198Q66K66 360 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 REP15Q6BDI9 236 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 NAPEPLDQ6IQ20 393 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 PAOXQ6QHF9 649 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 CES3Q6UWW8 571 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 FSTL5Q8N475 847 aaPredicted RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 DNAAF3Q8N9W5 541 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 CCNYQ8ND76 341 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 NTAN1Q96AB6 310 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 KIF12Q96FN5 646 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 SLC45A3Q96JT2 553 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 TUBA1CQ9BQE3 449 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 B3GNT5Q9BYG0 378 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 RUVBL2Q9Y230 463 aaKnown RBP16.04■□□□□ 0.16
SF3A2-201ENST00000221494 MFHAS1Q9Y4C4 1052 aa16.04■□□□□ 0.16
SF3A2-201ENST00000221494 TMEM221A6NGB7 291 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 PSMD12O00232 456 aaPredicted RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 SNRPB2P08579 225 aaKnown RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 CD1EP15812 388 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 ATP5F1P24539 256 aaPredicted RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 AKAP5P24588 427 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 RAB10P61026 200 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 CBX3Q13185 183 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 MTX3Q5HYI7 312 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 SLC43A3Q8NBI5 491 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 SMG8Q8ND04 991 aaKnown RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 OR2T34Q8NGX1 318 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 OR2T3Q8NH03 318 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 PNPT1Q8TCS8 783 aaKnown RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 PTCD2Q8WV60 388 aaKnown RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 HDAC11Q96DB2 347 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 HSPBAP1Q96EW2 488 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 COX4I2Q96KJ9 171 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 MRPL45Q9BRJ2 306 aaKnown RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 CCDC68Q9H2F9 335 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 MUC13Q9H3R2 512 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 AGO3Q9H9G7 860 aaKnown RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 IARS2Q9NSE4 1012 aaKnown RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 SEPT10Q9P0V9 454 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 CROTQ9UKG9 612 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 STAP1Q9ULZ2 295 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 SNX13Q9Y5W8 968 aa16.03■□□□□ 0.16
SF3A2-201ENST00000221494 ZNF638Q14966 1978 aaKnown RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 PDCD11Q14690 1871 aaKnown RBP16.03■□□□□ 0.16
SF3A2-201ENST00000221494 A0A1W2PQ45 241 aaPredicted RBP16.02■□□□□ 0.16
SF3A2-201ENST00000221494 A0A1W2PQY0 241 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 KCNU1A8MYU2 1149 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 EEF2KO00418 725 aaKnown RBP16.02■□□□□ 0.16
SF3A2-201ENST00000221494 XPO1O14980 1071 aaKnown RBP16.02■□□□□ 0.16
SF3A2-201ENST00000221494 AKAP10O43572 662 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 DCKP27707 260 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 NOS2P35228 1153 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 MSX2P35548 267 aaPredicted RBP16.02■□□□□ 0.16
SF3A2-201ENST00000221494 GMPRP36959 345 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 SULT1E1P49888 294 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 ATXN1P54253 815 aaKnown RBP16.02■□□□□ 0.16
SF3A2-201ENST00000221494 MPP1Q00013 466 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 SCAPQ12770 1279 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 CDH17Q12864 832 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 BNIP2Q12982 314 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 FASTKQ14296 549 aaKnown RBP16.02■□□□□ 0.16
SF3A2-201ENST00000221494 XKR4Q5GH76 650 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 DHFR2Q86XF0 187 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 CENPLQ8N0S6 344 aaPredicted RBP16.02■□□□□ 0.16
SF3A2-201ENST00000221494 RNF148Q8N7C7 305 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 ARRDC4Q8NCT1 418 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 TMIGD2Q96BF3 282 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 ATXN7L3BQ96GX2 97 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 PPP1R2P1Q96PQ5 205 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 BEGAINQ9BUH8 593 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.02■□□□□ 0.161e-6■■■■□ 19.9
SF3A2-201ENST00000221494 CCM2LQ9NUG4 571 aaPredicted RBP16.02■□□□□ 0.16
SF3A2-201ENST00000221494 PIH1D1Q9NWS0 290 aaKnown RBP16.02■□□□□ 0.16
SF3A2-201ENST00000221494 IPPQ9Y573 584 aa16.02■□□□□ 0.16
SF3A2-201ENST00000221494 SCN1AP35498 2009 aa16.02■□□□□ 0.15
SF3A2-201ENST00000221494 E2F8A0AVK6 867 aa16.02■□□□□ 0.15
SF3A2-201ENST00000221494 FCGR1AP12314 374 aa16.02■□□□□ 0.15
SF3A2-201ENST00000221494 PRPSAP1Q14558 356 aa16.02■□□□□ 0.15
SF3A2-201ENST00000221494 C6orf10Q5SRN2 563 aa16.02■□□□□ 0.15
SF3A2-201ENST00000221494 TWF2Q6IBS0 349 aaKnown RBP16.02■□□□□ 0.15
SF3A2-201ENST00000221494 HMBOX1Q6NT76 420 aa16.02■□□□□ 0.15
SF3A2-201ENST00000221494 PYROXD2Q8N2H3 581 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms