RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 EIF2B2P49770 351 aaKnown RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 ADARP55265 1226 aaKnown RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 WNT3AP56704 352 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 CES5AQ6NT32 575 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 MZT2BQ6NZ67 158 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 MARK2Q7KZI7 788 aaKnown RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 RHOJQ9H4E5 214 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 NOL6Q9H6R4 1146 aaKnown RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 PRDM8Q9NQV8 689 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 RCOR3Q9P2K3 495 aaPredicted RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 YDJCA8MPS7 323 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 EPORP19235 508 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 RPL5P46777 297 aaKnown RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 SMAD3P84022 425 aaKnown RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 EEF1DP3Q658K8 133 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 TRIM40Q6P9F5 258 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 SMYD1Q8NB12 490 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 IL31RAQ8NI17 732 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 UBASH3BQ8TF42 649 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 CXorf40BQ96DE9 158 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 MARK4Q96L34 752 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 ZNF446Q9NWS9 450 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 ST3GAL5Q9UNP4 418 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 ERGIC3Q9Y282 383 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 TLR5O60602 858 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 EDF1O60869 148 aaKnown RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 ADH1AP07327 375 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 CTBP1Q13363 440 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 PDK3Q15120 406 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 ZC3H7AQ8IWR0 971 aaKnown RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 EFCAB3Q8N7B9 438 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 KBTBD8Q8NFY9 601 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 HDAC10Q969S8 669 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 P2RY11Q96G91 374 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 SPACA7Q96KW9 195 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 RHBGQ9H310 441 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 PCDH18Q9HCL0 1135 aa13.63□□□□□ -0.23
SF3A1-201ENST00000215793 MRPS23Q9Y3D9 190 aaKnown RBP13.63□□□□□ -0.23
SF3A1-201ENST00000215793 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-201ENST00000215793 GNRH1P01148 92 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 MMP8P22894 467 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 EPHA3P29320 983 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 RCVRNP35243 200 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 SMARCB1Q12824 385 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 XKR6Q5GH73 641 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 OR52K2Q8NGK3 314 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 ALG3Q92685 438 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 REXO5Q96IC2 774 aaKnown RBP13.62□□□□□ -0.23
SF3A1-201ENST00000215793 FCRL2Q96LA5 508 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-201ENST00000215793 RACGAP1Q9H0H5 632 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 IKZF3Q9UKT9 509 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 COG5Q9UP83 839 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 DHRS12A0PJE2 317 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 MYBL2P10244 700 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 NR2F1P10589 423 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 ANPEPP15144 967 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 ITGAXP20702 1163 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 PPP1R26Q5T8A7 1209 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-201ENST00000215793 TAPT1Q6NXT6 567 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 AGMOQ6ZNB7 445 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 PANX1Q96RD7 426 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 OSBPL11Q9BXB4 747 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 TRIT1Q9H3H1 467 aaKnown RBP13.62□□□□□ -0.23
SF3A1-201ENST00000215793 VPS4AQ9UN37 437 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 MST1RQ04912 1400 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-201ENST00000215793 A0A0U1RQJ8 604 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 PLSCR1O15162 318 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 ENTPD5O75356 428 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 SERPINB7O75635 380 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 ECDO95905 644 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-201ENST00000215793 AMD1P17707 334 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 PPM1AP35813 382 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 PSMD4P55036 377 aaKnown RBP13.62□□□□□ -0.23
SF3A1-201ENST00000215793 FAM46CQ5VWP2 391 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 CERS5Q8N5B7 392 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 HEXDCQ8WVB3 486 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 RCN3Q96D15 328 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 TCF12Q99081 682 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 BPIFA1Q9NP55 256 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.62□□□□□ -0.23
SF3A1-201ENST00000215793 IQGAP1P46940 1657 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 B4GALT4O60513 344 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 ZMPSTE24O75844 475 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 BMP7P18075 431 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 KCNJ2P63252 427 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 MTAPQ13126 283 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 ANXA8L1Q5VT79 327 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 DET1Q7L5Y6 550 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 TNS4Q8IZW8 715 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 SLCO1B3Q9NPD5 702 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 EHD3Q9NZN3 535 aa13.62□□□□□ -0.23
SF3A1-201ENST00000215793 MAPK10P53779 464 aa13.61□□□□□ -0.23
SF3A1-201ENST00000215793 GRIK5Q16478 980 aa13.61□□□□□ -0.23
SF3A1-201ENST00000215793 ZSWIM7Q19AV6 140 aa13.61□□□□□ -0.23
SF3A1-201ENST00000215793 LSM12Q3MHD2 195 aaKnown RBP13.61□□□□□ -0.23
SF3A1-201ENST00000215793 C12orf29Q8N999 325 aa13.61□□□□□ -0.23
SF3A1-201ENST00000215793 ITCHQ96J02 903 aa13.61□□□□□ -0.23
SF3A1-201ENST00000215793 CCNB1IP1Q9NPC3 277 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms