RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 CCDC115Q96NT0 180 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CAMKK2Q96RR4 588 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 RASSF1Q9NS23 344 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ATPIF1Q9UII2 106 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 SAMHD1Q9Y3Z3 626 aaKnown RBP10.5□□□□□ -0.73
VCL-201ENST00000211998 KPNA5O15131 536 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 FYNP06241 537 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 HALP42357 657 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CYP4V2Q6ZWL3 525 aaPredicted RBP10.5□□□□□ -0.73
VCL-201ENST00000211998 RASAL3Q86YV0 1011 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 SLC41A1Q8IVJ1 513 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 POF1BQ8WVV4 589 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ZNF606Q8WXB4 792 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 TMEM176AQ96HP8 235 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 OMDQ99983 421 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 KANSL3Q9P2N6 904 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 DIP2BQ9P265 1576 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 SLIT1O75093 1534 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ISPDA4D126 451 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 FAM86B1E9PN63 330 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CASKO14936 926 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 TFPTP0C1Z6 253 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CREB1P16220 341 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 OAZ1P54368 228 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 DLG1Q12959 904 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 RBM20Q5T481 1227 aaKnown RBP10.5□□□□□ -0.73
VCL-201ENST00000211998 LIPMQ5VYY2 423 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 OLFML2AQ68BL7 652 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 C6orf89Q6UWU4 347 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 NIPA1Q7RTP0 329 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 GALNT5Q7Z7M9 940 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ELMOD2Q8IZ81 293 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 LEMD2Q8NC56 503 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 CHCHD6Q9BRQ6 235 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ACE2Q9BYF1 805 aaPredicted RBP10.5□□□□□ -0.73
VCL-201ENST00000211998 DNAJC28Q9NX36 388 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 PHF11Q9UIL8 331 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 RPS6KA6Q9UK32 745 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ADAM28Q9UKQ2 775 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 PIK3C2BO00750 1634 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ADAMTS13Q76LX8 1427 aa10.5□□□□□ -0.73
VCL-201ENST00000211998 ITSN1Q15811 1721 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 PRAMEF33A0A0G2JMD5 474 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ZSCAN5BA6NJL1 495 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 AXIN1O15169 862 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 PRAMEF10O60809 474 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 KDM4BO94953 1096 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ATP5F1P24539 256 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 EPHB3P54753 998 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 POTEHQ6S545 545 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 MILR1Q7Z6M3 343 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ITIH5Q86UX2 942 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 FBXO16Q8IX29 292 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 CCDC185Q8N715 623 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 KCNS3Q9BQ31 491 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 PDCD2LQ9BRP1 358 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 GBA2Q9HCG7 927 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 PDGFCQ9NRA1 345 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 CUEDC1Q9NWM3 386 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 U3KQV3 271 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ASTN2O75129 1339 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 ATP6AP2A0A1C7CYW4 349 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ARHGEF33A8MVX0 844 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 BCKDKO14874 412 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ATP6AP2O75787 350 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 AP2A2O94973 939 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ANGPTL1O95841 491 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 PGK1P00558 417 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ITGAVP06756 1048 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 CHRNGP07510 517 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 EPB42P16452 691 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 KDELR1P24390 212 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 MTHFRP42898 656 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 GNG2P59768 71 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 SIM2Q14190 667 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 SEC23AQ15436 765 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 MOGQ16653 247 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ZNF423Q2M1K9 1284 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 XKR5Q6UX68 686 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 TMPRSS11AQ6ZMR5 421 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 CDYL2Q8N8U2 506 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 HOPXQ9BPY8 73 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 PPM1HQ9ULR3 514 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 PDE10AQ9Y233 779 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 A0A087WZ62 844 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 MDM4O15151 490 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 RGS14O43566 566 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 HMGCRP04035 888 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 EPHX2P34913 555 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 POLD2P49005 469 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 DNASE1L3Q13609 305 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 EFR3AQ14156 821 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 COLEC12Q5KU26 742 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 KCNT2Q6UVM3 1135 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 UNC5AQ6ZN44 842 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ZDHHC17Q8IUH5 632 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 KBTBD7Q8WVZ9 684 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 C10orf82Q8WW14 230 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 SENP6Q9GZR1 1112 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 HIPK3Q9H422 1215 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms