RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 PIGFQ07326 219 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 CDH17Q12864 832 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 SLC25A52Q3SY17 297 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 NOMO2Q5JPE7 1267 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 EDEM1Q92611 657 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 ISL2Q96A47 359 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 HACL1Q9UJ83 578 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 ANKRD26P1Q6NSI1 321 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 PCYOX1LQ8NBM8 494 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 TSPYL2Q9H2G4 693 aaPredicted RBP20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 ALG9Q9H6U8 611 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 TRAF6Q9Y4K3 522 aa20.2■□□□□ 0.82
PPP1R3F-201ENST00000055335 ZBBXA8MT70 800 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 HUS1O60921 280 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 CYP2B6P20813 491 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 ATP5F1P24539 256 aaPredicted RBP20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 SLC1A2P43004 574 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 CARTPTQ16568 116 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 ZNF789Q5FWF6 425 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 PDZD4Q76G19 769 aaPredicted RBP20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 CENPIQ92674 756 aaPredicted RBP20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 SACM1LQ9NTJ5 587 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 ZNHIT2Q9UHR6 403 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 MTF2Q9Y483 593 aaPredicted RBP20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 PPP6CO00743 305 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 HOXD12P35452 270 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 TMEM214Q6NUQ4 689 aaKnown RBP20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 CATSPERGQ6ZRH7 1159 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 C3orf30Q96M34 536 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 FICDQ9BVA6 458 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 BPTFQ12830 3046 aa20.19■□□□□ 0.82
PPP1R3F-201ENST00000055335 BEST1O76090 585 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 BAIAP3O94812 1187 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 TMEM53Q6P2H8 277 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 DHRS4L2Q6PKH6 230 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 SGCDQ92629 289 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 CCDC90BQ9GZT6 254 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 TBC1D13Q9NVG8 400 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 GPRC5DQ9NZD1 345 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 BTRCQ9Y297 605 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 SCN1AP35498 2009 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 TMEM247A6NEH6 219 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 DLGAP1O14490 977 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 KDM1AO60341 852 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 BDNFP23560 247 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 CHRNA4P43681 627 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 APLP1P51693 650 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 TRAP1Q12931 704 aaKnown RBP20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 CCDC92Q53HC0 331 aaPredicted RBP20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 RABL3Q5HYI8 236 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 STRADAQ7RTN6 431 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 KRT27Q7Z3Y8 459 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 BTLAQ7Z6A9 289 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 ANKFN1Q8N957 763 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 DNERQ8NFT8 737 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 ZC3H15Q8WU90 426 aaKnown RBP20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 HEPHQ9BQS7 1158 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 FAM49AQ9H0Q0 323 aaPredicted RBP20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 PDGFCQ9NRA1 345 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 DDIT4Q9NX09 232 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 CD300AQ9UGN4 299 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 H3BMM5 538 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 CXCR3P49682 368 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 PIWIL3Q7Z3Z3 882 aaKnown RBP20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 ERO1BQ86YB8 467 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 IFNLR1Q8IU57 520 aaPredicted RBP20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 ZDHHC17Q8IUH5 632 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 TRPC4APQ8TEL6 797 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 VPS33AQ96AX1 596 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 MRPL57Q9BQC6 102 aaKnown RBP20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 NEURL2Q9BR09 285 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 BEGAINQ9BUH8 593 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 C9orf16Q9BUW7 83 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 TMEM181Q9P2C4 612 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 IFT80Q9P2H3 777 aaPredicted RBP20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 WDR37Q9Y2I8 494 aa20.18■□□□□ 0.82
PPP1R3F-201ENST00000055335 A8MT66 165 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 H0YJX3 145 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 TXNP10599 105 aaKnown RBP20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 BMP2P12643 396 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 TKTP29401 623 aaKnown RBP20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 POLR2IP36954 125 aaKnown RBP20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 NPY2RP49146 381 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 LSM3P62310 102 aaKnown RBP20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 CREB5Q02930 508 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 NFATC3Q12968 1075 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 IMPG1Q17R60 797 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 NAPEPLDQ6IQ20 393 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 PELI3Q8N2H9 469 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 TANKQ92844 425 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 RNF145Q96MT1 663 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 DNAI2Q9GZS0 605 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 EML4Q9HC35 981 aaKnown RBP20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 STAP1Q9ULZ2 295 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 CAPNS1P04632 268 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 HSPA1AP0DMV8 641 aaKnown RBP20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 HSPA1BP0DMV9 641 aaKnown RBP20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 ZNF12P17014 697 aa20.17■□□□□ 0.82
PPP1R3F-201ENST00000055335 MYF6P23409 242 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms