RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CACNG3O60359 315 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 SLC4A1P02730 911 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 FGFR3P22607 806 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 CYP2C18P33260 490 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 ACVRL1P37023 503 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 SREBF2Q12772 1141 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 MARC1Q5VT66 337 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 LIPMQ5VYY2 423 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 UGT2A3Q6UWM9 527 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 ZYG11AQ6WRX3 759 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 SLC24A5Q71RS6 500 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 ARHGAP22Q7Z5H3 698 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 COLGALT2Q8IYK4 626 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 PRPF18Q99633 342 aaKnown RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 OLFM1Q99784 485 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 ENTPD7Q9NQZ7 604 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 LZTS1Q9Y250 596 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 A0A1B0GTW7 788 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 KCNA5P22460 613 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 RPL14P50914 215 aaKnown RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 ZNF135P52742 658 aaPredicted RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 DYNC1I2Q13409 638 aaKnown RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 NRF1Q16656 503 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 SEL1L3Q68CR1 1132 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 RSPO2Q6UXX9 243 aaPredicted RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 LZTR1Q8N653 840 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 JADE3Q92613 823 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 EXT2Q93063 718 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 UROC1Q96N76 676 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 TRIM62Q9BVG3 475 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 CCSER2Q9H7U1 834 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 GTSE1Q9NYZ3 720 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 SLC4A7Q9Y6M7 1214 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 PSMD3O43242 534 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 TYMPP19971 482 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 CD151P48509 253 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 ARSDP51689 593 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 CYTH1Q15438 398 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 DBN1Q16643 649 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 TSTD2Q5T7W7 516 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 TIGD7Q6NT04 549 aaPredicted RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 ADGRG6Q86SQ4 1221 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 DCP1BQ8IZD4 617 aaKnown RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 RYBPQ8N488 228 aaPredicted RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 PCDH20Q8N6Y1 951 aaKnown RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 SIKE1Q9BRV8 207 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 UXTQ9UBK9 157 aaPredicted RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 TLR6Q9Y2C9 796 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 FNDC3AQ9Y2H6 1198 aaKnown RBP13.22□□□□□ -0.29
CTNS-201ENST00000046640 AOC2O75106 756 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 CAPN15O75808 1086 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 CSPG5O95196 566 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 CRTAMO95727 393 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 CLPTM1O96005 669 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 PEX11BO96011 259 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 KCNQ1P51787 676 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 ART3Q13508 389 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 POTEHQ6S545 545 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 PIM3Q86V86 326 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 LSMEM2Q8N112 164 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 KYQ8NBH2 561 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 TXNDC5Q8NBS9 432 aaKnown RBP13.21□□□□□ -0.29
CTNS-201ENST00000046640 BLOC1S5Q8TDH9 187 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 HDAC10Q969S8 669 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 GLT1D1Q96MS3 346 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 RTKNQ9BST9 563 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 ZYG11BQ9C0D3 744 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 POMKQ9H5K3 350 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 RGS18Q9NS28 235 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 ADA2Q9NZK5 511 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 AP4B1Q9Y6B7 739 aa13.21□□□□□ -0.29
CTNS-201ENST00000046640 MATN2O00339 956 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 GRID2O43424 1007 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 DNAJA2O60884 412 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 ATP5BP06576 529 aaKnown RBP13.21□□□□□ -0.3
CTNS-201ENST00000046640 CCDC166P0CW27 439 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 YWHAQP27348 245 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 OR1E1P30953 314 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 HOXC13P31276 330 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 DPP6P42658 865 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 DUSP4Q13115 394 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 CYLC2Q14093 348 aaPredicted RBP13.21□□□□□ -0.3
CTNS-201ENST00000046640 GALNT3Q14435 633 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 SH2D4BQ5SQS7 431 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 ABI1Q8IZP0 508 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 PGBD5Q8N414 524 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 PCSK9Q8NBP7 692 aaKnown RBP13.21□□□□□ -0.3
CTNS-201ENST00000046640 STYXQ8WUJ0 223 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 HIC2Q96JB3 615 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 GPR78Q96P69 363 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 PKP2Q99959 881 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 DRC3Q9H069 523 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 STN1Q9H668 368 aaKnown RBP13.21□□□□□ -0.3
CTNS-201ENST00000046640 TREX1Q9NSU2 369 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 ZDHHC7Q9NXF8 308 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 PCDH10Q9P2E7 1040 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 SCML2Q9UQR0 700 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 PCDHB5Q9Y5E4 795 aa13.21□□□□□ -0.3
CTNS-201ENST00000046640 NYNRINQ9P2P1 1898 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms