RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PIK3CGP48736 1102 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 KCNK10P57789 538 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 PRKAA1Q13131 559 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 IRF5Q13568 498 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 MAPRE2Q15555 327 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 TEX44Q53QW1 395 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 TIGD7Q6NT04 549 aaPredicted RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 SLC30A9Q6PML9 568 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 PCYOX1LQ8NBM8 494 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 DCAKDQ8WVC6 231 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 INPP5DQ92835 1189 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 MTFMTQ96DP5 389 aaKnown RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 MYOCQ99972 504 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 CADM1Q9BY67 442 aaKnown RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 ASAH2Q9NR71 780 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 WWOXQ9NZC7 414 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 GGA2Q9UJY4 613 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 TRHDEQ9UKU6 1024 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 ZFP37Q9Y6Q3 630 aaPredicted RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 C2orf81A6NN90 581 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 NEDD8-MDP1E9PL57 170 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 GLUD1P00367 558 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 MYOGP15173 224 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 PPARGP37231 505 aaPredicted RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 SERPINH1P50454 418 aaKnown RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 RPL14P50914 215 aaKnown RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 NR6A1Q15406 480 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 AMIGO2Q86SJ2 522 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 SPNS2Q8IVW8 549 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 PBXIP1Q96AQ6 731 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 ZNF333Q96JL9 665 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 CCT7Q99832 543 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 SAR1AQ9NR31 198 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 NSMCE4AQ9NXX6 385 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 NKX1-2Q9UD57 310 aaPredicted RBP12.14□□□□□ -0.47
CHPF2-201ENST00000035307 FBXW11Q9UKB1 542 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
CHPF2-201ENST00000035307 C2orf78A6NCI8 922 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 INPP4BO15327 924 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 SNAP91O60641 907 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 PTPN9P43378 593 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 ARHGEF7Q14155 803 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 WASHC2DQ5SRD0 308 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 NCBP2-AS2Q69YL0 99 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 CLEC6AQ6EIG7 209 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 FBXL22Q6P050 247 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 GLT6D1Q7Z4J2 308 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 BHLHE22Q8NFJ8 381 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-201ENST00000035307 C1orf50Q9BV19 199 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 RUBCNLQ9H714 662 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 BATF3Q9NR55 127 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 NMRK1Q9NWW6 199 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 EGFL7Q9UHF1 273 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 TRPC5OSA6NMA1 111 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 SRRM3A6NNA2 597 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-201ENST00000035307 KCNU1A8MYU2 1149 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 SCAMP1O15126 338 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 PTPN3P26045 913 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 GKP32189 559 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 NPY2RP49146 381 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 RALGDSQ12967 914 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 BIRC2Q13490 618 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 GTF2H3Q13889 308 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 NFYCQ13952 458 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 LRRC26Q2I0M4 334 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 ARL13AQ5H913 290 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-201ENST00000035307 ATXN7L2Q5T6C5 722 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-201ENST00000035307 FAM126BQ8IXS8 530 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 PGBD3Q8N328 593 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 PTGR2Q8N8N7 351 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-201ENST00000035307 C17orf80Q9BSJ5 609 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHPF2-201ENST00000035307 BCLAF3A2AJT9 711 aaKnown RBP12.13□□□□□ -0.47
CHPF2-201ENST00000035307 C5orf60A6NFR6 353 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 F8W8V4 182 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 AP3B1O00203 1094 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 MRASO14807 208 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 FFAR3O14843 346 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 GPR42O15529 346 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 IRAK2O43187 625 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 FGF18O76093 207 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 ZNF23P17027 643 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 SLC10A7Q0GE19 358 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 STX5Q13190 355 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 CCDC153Q494R4 210 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 LACTB2Q53H82 288 aaPredicted RBP12.13□□□□□ -0.47
CHPF2-201ENST00000035307 COLGALT2Q8IYK4 626 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 KREMEN2Q8NCW0 462 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 BBS2Q9BXC9 721 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 EFR3BQ9Y2G0 817 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 FCF1Q9Y324 198 aaKnown RBP12.13□□□□□ -0.47
CHPF2-201ENST00000035307 YIPF1Q9Y548 306 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 ORC6Q9Y5N6 252 aa12.13□□□□□ -0.47
CHPF2-201ENST00000035307 KPNA3O00505 521 aaPredicted RBP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 CCNT2O60583 730 aaKnown RBP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 ADH1AP07327 375 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 ADAM17P78536 824 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 PITRM1Q5JRX3 1037 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 PCID2Q5JVF3 399 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms