RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Timm50Q9D880 353 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Dnajc10Q9DC23 793 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 DpysQ9EQF5 519 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 DgkeQ9R1C6 564 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Osbpl10S4R1M9 766 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 1810010D01RikA0A1L1SR87 51 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Pcdha4O88689 947 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Irf8P23611 424 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Fbln2P37889 1221 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tnfsf4P43488 198 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gpr85P60894 370 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Psmc5P62196 406 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Psmc6P62334 389 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ppp3caP63328 521 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ppm1jQ149T7 507 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Pdss2Q33DR3 401 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cyp11b1Q3TG86 501 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Rnf43Q5NCP0 784 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Atp11bQ6DFW5 1175 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Adgrg6Q6F3F9 1165 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Znf618Q80YY7 953 aaKnown RBP9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Amigo2Q80ZD9 519 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Zcchc4Q8BKW4 512 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Utp15Q8C7V3 528 aaKnown RBP9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Zbtb9Q8CDC7 459 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Prmt5Q8CIG8 637 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Appl2Q8K3G9 662 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Vmn1r219Q8R271 312 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cdca3Q99M54 266 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Dis3Q9CSH3 958 aaKnown RBP9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Commd8Q9CZG3 183 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Eif3kQ9DBZ5 218 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Dpp7Q9ET22 506 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Kcnq4Q9JK97 696 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ninj2Q9JL89 143 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 PnckQ9QYK9 343 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Asb1Q9WV74 336 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mtmr2Q9Z2D1 643 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Abca15E9PWH4 1668 aa9.79□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm28168A0A087WNP1 180 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Wdr49A0A0N4SUK7 710 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mllt3A2AM29 569 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Klhdc7aA2APT9 773 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Fignl2J3QK54 644 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 PrkacaP05132 351 aaKnown RBP9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Stat5bP42232 786 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cxcl5P50228 132 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Hdac2P70288 488 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Pld2P97813 933 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Samd11Q1RNF8 542 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cyp4f37Q3V1F1 546 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Nt5c2Q3V1L4 560 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Plk5Q4FZD7 595 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Spire1Q52KF3 598 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Bhlha9Q5RJB0 231 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Zc4h2Q68FG0 224 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Nomo1Q6GQT9 1214 aaKnown RBP9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Zranb3Q6NZP1 1069 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ccdc117Q6PB51 277 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Dtx4Q6PDK8 616 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Kirrel1Q80W68 789 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Teddm1aQ810U2 305 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Lix1lQ8BQ89 337 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Slc35g1Q8BY79 368 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cdc16Q8R349 620 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 GarsQ9CZD3 729 aaKnown RBP9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Rfc5Q9D0F6 339 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ropn1lQ9EQ00 218 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Hipk3Q9ERH7 1192 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cdc20Q9JJ66 499 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mtmr7Q9Z2C9 660 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cntnap4Q99P47 1310 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mcf2A2AEU1 1111 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tubb1A2AQ07 451 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm10112D3YWP5 117 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm17175E9Q528 179 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Timm44O35857 452 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Aif1O70200 147 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gnpda1O88958 289 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Chrna1P04756 457 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 YwhazP63101 245 aaKnown RBP9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tnfrsf26P83626 204 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Meaf6Q2VPQ9 191 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Slc2a13Q3UHK1 637 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gal3st4Q3V1B8 480 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 PterQ60866 349 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 PostnQ62009 838 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cyp7a1Q64505 503 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Sort1Q6PHU5 825 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ints7Q7TQK1 966 aaKnown RBP9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Samd4bQ80XS6 687 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Zbtb41Q811F1 908 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Spata2lQ8BNN1 426 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Plin5Q8BVZ1 463 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Phactr3Q8BYK5 558 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Kbtbd13Q8C828 458 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Celf3Q8CIN6 465 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ahi1Q8K3E5 1047 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Pcdhb6Q91XZ4 772 aa9.78□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Stard13Q923Q2 1113 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms