RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Fam117bQ3U3E2 584 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Nat9Q3UG98 241 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Lrrc47Q505F5 581 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Dnajc1Q61712 552 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cd300lfQ6SJQ7 337 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Far2Q7TNT2 515 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Olfr297Q7TS07 310 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Olfr295Q7TS08 309 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Zfp606Q7TSV0 794 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Hsfy2Q80Y37 392 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cxcr1Q810W6 351 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rab36Q8CAM5 267 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Dennd1cQ8CFK6 786 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tada2aQ8CHV6 443 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 PvrQ8K094 408 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Stx5Q8K1E0 355 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Abhd11Q8K4F5 307 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Slc30a5Q8R4H9 761 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Hip1Q8VD75 1029 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Exd2Q8VEG4 650 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Slc35b2Q91ZN5 431 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rwdd4Q9CPR1 188 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Raver1Q9CW46 748 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 St6galnac1Q9QZ39 526 aa9.86□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ighg3A0A1Y7VJN6 399 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Olfr1023A2ASU6 311 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm10717D3Z1I8 228 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm5160F8VPN3 147 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vmn1r76F8VQ63 324 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Srp72F8VQC1 671 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Svs4P18419 113 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Csf3rP40223 837 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 ArsaP50428 506 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Csrp3P50462 194 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 CcnfP51944 777 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Itga11P61622 1188 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ybx1P62960 322 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 PrkcgP63318 697 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Akr1c6P70694 323 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 HpcaP84075 193 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Slc45a4Q0P5V9 785 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tex24Q5DP50 351 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Dclk2Q6PGN3 756 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 MroQ7TNB4 248 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Trit1Q80UN9 467 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Actr5Q80US4 605 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pnma8aQ80VM8 430 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Peli3Q8BXR6 445 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rftn2Q8CHX7 500 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 ThtpaQ8JZL3 224 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Prrg2Q8R182 198 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tfap2dQ91ZK0 452 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tnip2Q99JG7 430 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Neurl2Q9D0S4 285 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ten1Q9D7K2 161 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Kat2bQ9JHD1 813 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Extl1Q9JKV7 669 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tnip3A0A1D5RMN0 279 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vmn2r27D3YUK6 857 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 1600015I10RikE9Q745 711 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vmn2r88L7N1W8 857 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Hs3st1O35310 311 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Socs2O35717 198 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 EgfP01132 1217 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Kcnc1P15388 511 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 SagP20443 403 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Hspa4lP48722 838 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Btg3P50615 252 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 MylpfP97457 169 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Syce1lQ5D525 247 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 MogQ61885 246 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tpd52Q62393 224 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Olfr867Q7TRF3 331 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Msantd1Q8BIL2 278 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Frs2Q8C180 508 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rbmx2Q8R0F5 326 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vps39Q8R5L3 886 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 DarsQ922B2 501 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Traf7Q922B6 594 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Snrpb2Q9CQI7 225 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ddit4Q9D3F7 229 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ccdc97Q9DBT3 340 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 AadatQ9WVM8 425 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ighv11-2A0A075B5R8 117 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm13276A0A087WR18 182 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm43951A0A0N4SUT6 962 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Zfp985A2A7A5 519 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 SmoktcrA2KF29 484 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Spata31E9QAF0 1014 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cyp2c68K7N6C2 491 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Fpr-rs3O88537 343 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Lrig1P70193 1091 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Dnajb14Q149L6 379 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tmem102Q3UPR7 509 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Axdnd1Q3UZ57 424 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Serpina3gQ5I2A0 440 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sox17Q61473 419 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Six3Q62233 333 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Polr2eQ80UW8 210 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Snx32Q80ZJ7 404 aa9.85□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms