RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Gm6502L7N456 481 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Dnmt3cP0DOY1 709 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Il2rbP16297 539 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Msr1P30204 458 aaKnown RBP8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Emilin3P59900 758 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 4930480E11RikQ0VG34 394 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Nol9Q3TZX8 714 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 EndouQ3V188 412 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 MuskQ61006 868 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Jak2Q62120 1129 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 DgkqQ6P5E8 934 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Tmem106cQ80VP8 260 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Chst8Q8BQ86 417 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Kansl2Q8BQR4 486 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ccdc32Q8BS39 179 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ano4Q8C5H1 955 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rab36Q8CAM5 267 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Fem1cQ8CEF1 617 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gbp5Q8CFB4 590 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mark4Q8CIP4 752 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Plcl2Q8K394 1128 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Zdhhc3Q8R173 299 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ttc36Q8VBW8 186 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Upb1Q8VC97 393 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Olfr1361Q8VFH0 317 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Lpin1Q91ZP3 924 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ndufa5Q9CPP6 116 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gstt4Q9D4P7 240 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Tmem114Q9D563 222 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Lrrc46Q9DAP0 323 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Galk1Q9R0N0 392 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Nme3Q9WV85 169 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Olfr485A0A140LJF5 317 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 1700064H15RikD3Z4D4 81 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Eddm13E9Q7F5 164 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cyp27b1O35084 507 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 St8sia2O35696 375 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Timm44O35857 452 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 DdcO88533 480 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mxd1P50538 227 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Psme3P61290 254 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Irf3P70671 419 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Htr4P97288 388 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Eml1Q05BC3 814 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Tigd2Q0VBL1 525 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm4951Q3UED7 406 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mfhas1Q3V1N1 1048 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm5431Q5NCB3 844 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Psen2Q61144 448 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 RetsatQ64FW2 609 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Dennd2cQ6P9P8 914 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 CcnyQ8BGU5 341 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Prkaa2Q8BRK8 552 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cndp1Q8BUG2 492 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Zfp398Q8BV16 643 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Asb14Q8C6Y6 587 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Slc46a2Q8CA03 479 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pphln1Q8K2H1 381 aaKnown RBP8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Prpf39Q8K2Z2 665 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ppp6r2Q8R3Q2 923 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Dis3Q9CSH3 958 aaKnown RBP8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Slc13a2Q9ES88 586 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm44511A0A0N4SW10 223 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Zcchc7B1AX39 541 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Zar1lC3VD30 291 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Clcn7O70496 803 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 ShdO88834 343 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 CstaP56567 97 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Copz1P61924 177 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Podnl1Q6P3Y9 559 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rxfp1Q6R6I7 758 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Zbtb5Q7TQG0 670 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Olfr1057Q7TR75 315 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Spata20Q80YT5 790 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Epb41l5Q8BGS1 731 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ccdc184Q8BMK5 191 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Atg14Q8CDJ3 492 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Aqp12Q8CHJ2 290 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 As3mtQ91WU5 376 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pcdha1Q91Y21 948 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Stk33Q924X7 491 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Mov10l1Q99MV5 1187 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Erap1Q9EQH2 930 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Akr1c12Q9JLI0 323 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 B4galt5Q9JMK0 388 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm5538W4VSP6 401 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 IsxA1A546 240 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm3755K7N743 167 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm3033M0QWI0 180 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm3532M0QWL4 194 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 ThbdP15306 577 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ppp3cbP48453 525 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Shmt1P50431 478 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Rack1P68040 317 aaKnown RBP8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Dppa5bP85965 119 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 1810049J17RikQ3V2G9 153 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pla2g4dQ50L43 825 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 CochQ62507 552 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gm5414Q6IFZ8 552 aa8.32□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Zcchc4Q8BKW4 512 aa8.32□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms