RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Ppp4r1Q8K2V1 951 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Acad10Q8K370 1069 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Zbtb44Q8R0A2 453 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Stard13Q923Q2 1113 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 CenpsQ9D084 142 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Cldn19Q9ET38 224 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Slc7a9Q9QXA6 487 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Znf536Q8K083 1302 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Olfr663A0A1B0GSI9 319 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Zfp780bE9Q2S6 806 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Rad51ap2G3UW63 976 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 PenkP22005 268 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Man2a2Q8BRK9 1152 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Appl1Q8K3H0 707 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Olfr342Q8VGK7 312 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Fcf1Q9CTH6 198 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Aldh1a3Q9JHW9 512 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Elf4Q9Z2U4 655 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Cib2Q9Z309 187 aa23.05■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Prrg1A2BFE8 218 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Rpl21O09167 160 aaKnown RBP23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 F3P20352 294 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Tlx1P43345 332 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Calb2Q08331 271 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Spag6Q3V0U9 509 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Tecpr1Q80VP0 1166 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Zbtb24Q80X44 710 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Tmem259Q8CIV2 574 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Sh3kbp1Q8R550 709 aaKnown RBP23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Bag2Q91YN9 210 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 CinpQ9D0V8 212 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ttyh1Q9D3A9 450 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Habp4Q9JKS5 411 aaKnown RBP23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Nsmce4aG3XA30 381 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Sema3aO08665 772 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Cldn4O35054 210 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Krt10P02535 570 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 RilpQ5ND29 369 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Gstt2Q61133 244 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Wee2Q66JT0 555 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ip6k1Q6PD10 433 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 GnasQ6R0H7 1133 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Cox14Q8BH51 57 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Msantd1Q8BIL2 278 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Lrrc19Q8BZT5 364 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Msi2Q920Q6 346 aaKnown RBP23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Dhrs1Q99L04 313 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Pgm1Q9D0F9 562 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 DlstQ9D2G2 454 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Duoxa2Q9D311 320 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Pgam1Q9DBJ1 254 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Hao1Q9WU19 370 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Htatip2Q9Z2G9 242 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Vmn2r25W4VSP2 855 aa23.04■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Jbts17Q8CE72 3214 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ttc7bE9Q6P5 843 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Zfp275G3X904 499 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 AgxtO35423 414 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Prkaa1Q5EG47 559 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ripor1Q68FE6 1223 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 DgkqQ6P5E8 934 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Syt14Q7TN84 555 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Olfr366Q7TRY4 309 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Rrp15Q9CYX7 281 aaKnown RBP23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ppp2r3cQ9JK24 453 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Dio2Q9Z1Y9 266 aa23.03■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Acnat1A2AKK5 416 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Zfp952B0V2W4 504 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Fbxl18E9PYR1 771 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 CkmP07310 381 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 E330034G19RikQ3UWX6 351 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Spata48Q5NC83 441 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Olfr464Q5SW48 313 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Tead4Q62296 427 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 CptpQ8BS40 216 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 CherpQ8CGZ0 936 aaKnown RBP23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Olfr615Q8VGY4 313 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Cdc26Q99JP4 85 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Rnf146Q9CZW6 359 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Spry1Q9QXV9 313 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Sept6Q9R1T4 434 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Shroom3Q9QXN0 1986 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Itpripl1A2ASA8 547 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 DesP31001 469 aaKnown RBP23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Tbc1d10aP58802 500 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Rasgrf2P70392 1189 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Epas1P97481 874 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Cyb5r4Q3TDX8 528 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Slc9b2Q5BKR2 547 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Kirrel3Q8BR86 778 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 AgmoQ8BS35 447 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Thoc1Q8R3N6 657 aaKnown RBP23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Ier5lQ99J55 406 aa23.02■■□□□ 1.28
Upf3a-201ENSMUST00000043767 Gm5930D3Z257 264 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Tada2bD3Z4Z0 420 aaKnown RBP23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Olfr611K7N609 323 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gm7942L7N277 499 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Olfr612L7N462 323 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gp1baO35930 734 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 ItgavP43406 1044 aa23.01■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms