RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Stk32aQ8BGW6 398 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Znf473Q8BI67 892 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Il33Q8BVZ5 266 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Dus1lQ8C2P3 475 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Syt15Q8C6N3 418 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Mfsd6Q8CBH5 775 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 BroxQ8K2Q7 411 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Snx29Q9D3S3 818 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Armc8Q9DBR3 673 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 DgkeQ9R1C6 564 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 KlO35082 1014 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 PrlP06879 226 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Alas2P08680 587 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Cyp2b10P12791 500 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Ncam1P13595 1115 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Cyp2c38P56655 490 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Npr3P70180 536 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Nrp1P97333 923 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Hdgfl2Q3UMU9 669 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Lrrc8bQ5DU41 803 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Itih2Q61703 946 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Brsk2Q69Z98 735 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 CltbQ6IRU5 229 aaKnown RBP9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Klhl5Q6PFE1 708 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Naaladl1Q7M758 745 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Mtmr12Q80TA6 747 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Zdhhc19Q810M5 347 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Psmd11Q8BG32 422 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 MafaQ8CF90 359 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Glis1Q8K1M4 789 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Ddx52Q8K301 598 aaKnown RBP9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 PigqQ9QYT7 581 aa9.89□□□□□ -0.83
Syne1-201ENSMUST00000041639 Sirpb1aA0A0A6YYP6 397 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Dcdc2bF7BCK0 340 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Map2k3O09110 347 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Azin1O35484 448 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 GlrbP48168 496 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Itga11P61622 1188 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Msantd2Q6NZR2 559 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Scaf4Q6PFF0 1209 aaKnown RBP9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 D3Ertd751eQ8BGN2 192 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Fgd2Q8BY35 655 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Arhgap25Q8BYW1 648 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Zfp57Q8C6P8 421 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Tnfaip8l1Q8K288 186 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Fam83aQ8K2P2 436 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Olfr695Q8VFM3 315 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Exosc4Q921I9 245 aaKnown RBP9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Prpf19Q99KP6 504 aaKnown RBP9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Cmtm6Q9CZ69 183 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Slit1Q80TR4 1531 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Chil5A0A0G2JDS2 431 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Krt83E9Q1Y9 479 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Vmn2r19G5E8G4 854 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Timm13P62075 95 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 PpatQ8CIH9 517 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Saysd1Q8K190 188 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Vmn1r203Q8R273 311 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 DgkgQ91WG7 788 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Pcdhb13Q91Y06 796 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Trps1Q925H1 1281 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Gemin2Q9CQQ4 269 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Clec4aQ9QZ15 238 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 ChmlQ9QZD5 621 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Slfn3A0A1L1STQ7 640 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Tnfaip1O70479 316 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 PtpaP58389 323 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 LcorlQ3U285 600 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Gpr65Q61038 337 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Olfr867Q7TRF3 331 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Gk5Q8BX05 534 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Gm42417Q8K1D0 126 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Cnot6Q8K3P5 557 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Stk32cQ8QZV4 488 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Cyp4f3Q99N16 524 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Ergic2Q9CR89 377 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Atp6ap1Q9R1Q9 463 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Slfn9B1ARD6 910 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Mup13L7N222 235 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Pik3cdO35904 1043 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Fam129aQ3UW53 926 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Ubp1Q811S7 540 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Zhx3Q8C0Q2 951 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Pabpc5Q8C7D3 381 aaKnown RBP9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Epn2Q8CHU3 595 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Evi2bQ8VD58 444 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Nudt8Q9CR24 210 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Rasgef1cQ9D300 466 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Fam83dQ9D7I8 585 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Tysnd1Q9DBA6 568 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Vmn1r3A2AMT7 306 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Gm281D3Z1Y0 860 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 IppP28575 584 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Rab23P35288 237 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 MafP54843 370 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Ctps1P70698 591 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Nr1d2Q60674 576 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Rgl2Q61193 778 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Snx32Q80ZJ7 404 aa9.88□□□□□ -0.83
Syne1-201ENSMUST00000041639 Wasf2Q8BH43 497 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms