RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Brcc3P46737 291 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ctps2P70303 586 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 UcmaQ14BU0 138 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mapkapk3Q3UMW7 384 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tapt1Q4VBD2 564 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Zdhhc20Q5Y5T1 380 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Bcap31Q61335 245 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ca4Q64444 305 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cyp3a11Q64459 504 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nrg1Q6DR99 700 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Stmnd1Q6P3A1 279 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tlr12Q6QNU9 906 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Slc7a4Q8BLQ7 635 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Lmo3Q8BZL8 145 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Prmt5Q8CIG8 637 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gfm2Q8R2Q4 779 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mul1Q8VCM5 352 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Smad9Q9JIW5 430 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Wnk3Q80XP9 1757 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr292F8VQ84 308 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Prim2P33610 505 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Resp18P47939 175 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Anxa4P97429 319 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 PrkcqQ02111 707 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Col28a1Q2UY11 1141 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cdkl4Q3TZA2 342 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cdc16Q8R349 620 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pcdha2Q91Y17 948 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Fam83dQ9D7I8 585 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 GabrqQ9JLF1 638 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 DgkdE9PUQ8 1220 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Psma3O70435 255 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rpl3P27659 403 aaKnown RBP10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mapkapk2P49138 386 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tas2r16P59529 299 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Fmo3P97501 534 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Fam35aQ3UEN2 891 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 PhgdhQ61753 533 aaKnown RBP10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Myl12aQ6ZWQ9 172 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ahcyl1Q80SW1 530 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Atp2c1Q80XR2 918 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gabra5Q8BHJ7 463 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ago3Q8CJF9 860 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Syn3Q8JZP2 579 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mtg1Q8R2R6 326 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Lyrm1Q9CQB7 122 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Marc1Q9CW42 340 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mfsd10Q9D2V8 456 aaKnown RBP10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Vmn2r44L7N2E1 861 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 MttpO08601 894 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 ChkaO54804 453 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 HmgcrQ01237 887 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Q3UTZ3 580 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 StyxQ60969 223 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 ErfeQ6PGN1 340 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Hus1Q8BQY8 280 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rmdn2Q8BSE0 410 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nipal4Q8BZF2 406 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Taf5Q8C092 801 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Samd3Q8C4H2 520 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 PdgfcQ8CI19 345 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr345Q8VGK4 311 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nmd3Q99L48 503 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Klhl35Q9CZ49 574 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tmem114Q9D563 222 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ccdc81Q9D5W4 654 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ifrd2Q9D8U0 441 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm5751A2AHC8 147 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cntnap3E9PY62 1287 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Vmn2r118E9Q1C1 853 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 SprtnG3X912 497 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Lrrc10bG3XA50 292 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pik3cdO35904 1043 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Btg3P50615 252 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tmprss15P97435 1069 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nlrc4Q3UP24 1024 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm136Q3V037 328 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr533Q7TRT7 320 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Oscp1Q8BHW2 379 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Guca1bQ8VBV8 201 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pcdhb10Q91VE5 797 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Depdc7Q91WS7 511 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pcdhga9Q91XX9 932 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Myh4Q5SX39 1939 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Sirpb1aA0A0A6YYP6 397 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rhbdl2A2AGA4 302 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rad21l1A2AU37 552 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ttc7bE9Q6P5 843 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr603L7N1Y4 312 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Vmn2r46L7N282 809 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cyp2c38P56655 490 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Akr1c6P70694 323 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Inf2Q0GNC1 1273 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Adam2Q60718 735 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 KyQ8C8H8 661 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Samd4aQ8CBY1 711 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Atg14Q8CDJ3 492 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Plcl2Q8K394 1128 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 RorbQ8R1B8 470 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Vmn1r206Q8R277 312 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms