RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Smarcal1Q8BJL0 910 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Hip1Q8VD75 1029 aaKnown RBP11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Far1Q922J9 515 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Htra1Q9R118 480 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Clk2O35491 499 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Cct8P42932 548 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 CtscP97821 462 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 GmpsQ3THK7 693 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Slfn4Q3UV66 602 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Olfr8Q60892 310 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Gabbr2Q80T41 940 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Pnma8aQ80VM8 430 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Teddm1aQ810U2 305 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Sephs1Q8BH69 392 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Mterf1aQ8CHZ9 379 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Zbtb8bQ8CII0 484 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 McmbpQ8R3C0 642 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Dennd2dQ91VV4 469 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Them5Q9CQJ0 248 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Wnt8bQ9WUD6 350 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Znf318Q99PP2 2237 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Hk2O08528 917 aaKnown RBP11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Has3O08650 554 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 NapsaO09043 419 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Fgl2P12804 432 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Htr5bP31387 370 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Arpp19P56212 112 aaKnown RBP11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Fam169aQ5XG69 665 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Fnip1Q68FD7 1165 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Hyal5Q812F3 526 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Noc4lQ8BHY2 516 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Tyw1Q8BJM7 721 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Sec22cQ8BXT9 303 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Zdhhc7Q91WU6 308 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Rwdd4Q9CPR1 188 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Tmem53Q9D0Z3 276 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Tdp2Q9JJX7 370 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Galk1Q9R0N0 392 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 PotegA5H0M4 473 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 C87414E9PWI7 475 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Ap2a1P17426 977 aaKnown RBP11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Pla2g6P97819 807 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Mtf2Q02395 593 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Tmem247Q497K7 211 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Clec12aQ504P2 267 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Akr1c13Q8VC28 323 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Tcf7l2Q924A0 459 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Lrrc71Q9D3W5 558 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Rnf11Q9QYK7 154 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Slfn2Q9Z0I6 378 aa11.39□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Zfp358E9Q8M1 571 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Speer4cG3UXD1 256 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Gm10354K7N6A0 256 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 NmbrO54799 390 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Mmp10O55123 476 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Q32M26 199 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Paqr6Q6TCG5 343 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Lpcat2Q8BYI6 544 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Asb2Q8K0L0 634 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 BfarQ8R079 450 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Ace2Q8R0I0 805 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Cyp2c70Q91W64 489 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Neurl2Q9D0S4 285 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 DtnaQ9D2N4 746 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Zc3h4Q6ZPZ3 1304 aaKnown RBP11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Sbno2Q7TNB8 1349 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Man1b1A2AJ15 658 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Lmnb1P14733 588 aaKnown RBP11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Nr5a2P45448 560 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Galnt3P70419 633 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 AxlQ00993 888 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Tmem173Q3TBT3 378 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Nol9Q3TZX8 714 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Ndst1Q3UHN9 882 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Zdhhc19Q810M5 347 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 PigwQ8C398 503 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Acsm2Q8K0L3 575 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 LiasQ99M04 373 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Trim39Q9ESN2 488 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Plscr1Q9JJ00 328 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Slc2a5Q9WV38 501 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 GghQ9Z0L8 317 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Nup205A0A0J9YUD5 2061 aaKnown RBP11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Dhtkd1A2ATU0 921 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Gm13128L7MU96 475 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 ThbdP15306 577 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 ZfaP23607 742 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 BgnP28653 369 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Stfa3P35173 103 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Hoxc13P50207 328 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Ifi44Q8BV66 422 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 LnpepQ8C129 1025 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 OptcQ920A0 328 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Tas1r1Q99PG6 842 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Pmf1Q9CPV5 202 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Psma4Q9R1P0 261 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 B3galt4Q9Z0F0 371 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Gm8011K7N6Y5 207 aa11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Eci1P42125 289 aaKnown RBP11.38□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Inpp1P49442 396 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms