RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Shmt1P50431 478 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Btbd3P58545 530 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 YwhaqP68254 245 aaKnown RBP9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 NfycP70353 335 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Rapgefl1Q68EF8 662 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fam126bQ8C729 530 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Dhx36Q8VHK9 1001 aaKnown RBP9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ggt7Q99JP7 662 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Scd3Q99PL7 359 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Rexo2Q9D8S4 237 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tex22Q9D9U4 189 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ern2Q9Z2E3 911 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fam209A2APA5 170 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Dpysl4O35098 572 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fgf10O35565 209 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 AprtP08030 180 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 AlplP09242 524 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 ThbdP15306 577 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 SqleP52019 572 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Oaz1P54369 227 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Cyp2c38P56655 490 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Meaf6Q2VPQ9 191 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Serac1Q3U213 654 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ugt3a1Q3UP75 523 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mfhas1Q3V1N1 1048 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Grik1Q60934 836 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Atp11bQ6DFW5 1175 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Serpina12Q7TMF5 413 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 H2-Q4Q8HWB2 354 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Defb19Q8K3I8 83 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Smyd2Q8R5A0 433 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ndufs1Q91VD9 727 aaKnown RBP9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Myh7Q91Z83 1935 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Q9D4A5 307 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Akr1c12Q9JLI0 323 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 VapbQ9QY76 243 aaKnown RBP9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Copg1Q9QZE5 874 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Msl3Q9WVG9 525 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Plch1Q4KWH5 1682 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Clca3bE9PUL3 1044 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm17175E9Q528 179 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vmn2r38G3UYA8 861 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 SprtnG3X912 497 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vmn2r33K7N705 861 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Rnf19aP50636 840 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 GckP52792 465 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Creb1Q01147 341 aaKnown RBP9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Cln3Q61124 438 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Foxd1Q61345 456 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ifi47Q61635 420 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Znf821Q6PD05 413 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Reep1Q8BGH4 201 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Wasf2Q8BH43 497 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 B3glctQ8BHT6 489 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Dlgap2Q8BJ42 1059 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Hus1Q8BQY8 280 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Rnf219Q8K2Y0 722 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mark1Q8VHJ5 795 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 HnrnpabQ99020 285 aaKnown RBP9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Q99LU8 229 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tomm70Q9CZW5 611 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Keap1Q9Z2X8 624 aaKnown RBP9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm281D3Z1Y0 860 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fbrsl1E9Q9T0 1031 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Zfp105G3X9I0 524 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Alas2P08680 587 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Nrp1P97333 923 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Dnajb14Q149L6 379 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Q3UTZ3 580 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Lrrc8bQ5DU41 803 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 TsnQ62348 228 aaKnown RBP9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gpr156Q6PCP7 798 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Noc4lQ8BHY2 516 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gpc2Q8BKV1 579 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Robo4Q8C310 1012 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Bcas3Q8CCN5 928 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fbxo43Q8CDI2 640 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 AclyQ91V92 1091 aaKnown RBP9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Reep3Q99KK1 254 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Kctd4Q9D7X1 259 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pou5f2Q9DAC9 329 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Paqr5Q9DCU0 330 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ndel1Q9ERR1 345 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Capn15Q9JLG8 1095 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Egfl7Q9QXT5 275 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tsc22d3Q9Z2S7 137 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sirpb1aA0A0A6YYP6 397 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sult2a7A0A1B0GRF0 313 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 A0A1L1ST33 502 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vmn2r7E9PYL5 915 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 SmgcF6VRN1 385 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vmn2r3H3BJ88 915 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vmn2r6H3BK29 913 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vmn2r70K7N702 854 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Asgr1P34927 284 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 TubP50586 505 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pld5Q3UNN8 536 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pik3r3Q64143 461 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tlr12Q6QNU9 906 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Lrrc19Q8BZT5 364 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms