RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Zfp105G3X9I0 524 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Gm3383J3QQ59 259 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Gm3239L7N2D9 227 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Acot1O55137 419 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 AvilO88398 819 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Gas2P11862 314 aaKnown RBP10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ptchd3Q0EEE2 906 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Fam131bQ3TY60 332 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Bcl2l1Q64373 233 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Spata20Q80YT5 790 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Fbxo28Q8BIG4 368 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ptrh1Q8BW00 204 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Cpt1bQ924X2 772 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tbx20Q9ES03 445 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Abca15E9PWH4 1668 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Dusp8O09112 663 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 AoahO35298 574 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rdh7O88451 316 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Yme1l1O88967 715 aaKnown RBP10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tgfb2P27090 414 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Morf4l1P60762 362 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 SgcgP82348 291 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Oog3Q3UWY1 500 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Bend6Q6PFX2 281 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Dpy19l3Q71B07 716 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tgm6Q8BM11 706 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ugt3a2Q8JZZ0 523 aa10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Pwp1Q99LL5 501 aaKnown RBP10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 Celf2Q9Z0H4 508 aaKnown RBP10.88□□□□□ -0.67
Ciita-201ENSMUST00000023147 S100zB9EJL3 99 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Itgb5O70309 798 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Defa8P50706 81 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 DtymkP97930 212 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Fcho2Q3UQN2 809 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Nxpe4Q52KP5 543 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Fnip1Q68FD7 1165 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Cfap206Q6PE87 622 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rad54bQ6PFE3 886 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Olfr792Q7TRH9 311 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Arhgap11aQ80Y19 987 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tbx10Q810F8 385 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Elmo3Q8BYZ7 720 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Bhlhe22Q8C6A8 355 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Samd4aQ8CBY1 711 aaKnown RBP10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rftn2Q8CHX7 500 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Plac9Q8K262 108 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tcaf2Q921K8 919 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Clvs1Q9D4C9 354 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Aldh6a1Q9EQ20 535 aaKnown RBP10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rasgrp2Q9QUG9 608 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ggt5Q9Z2A9 573 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Prl6a1O35257 230 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Hoxc6P10629 235 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Nos3P70313 1202 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 4930502E18RikQ14BQ3 236 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Fam35aQ3UEN2 891 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Zfp868Q3UTQ6 422 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Srbd1Q497V5 1015 aaKnown RBP10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Adora2bQ60614 332 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Sf1Q64213 653 aaKnown RBP10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Senp5Q6NXL6 749 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tmem164Q6PHN7 296 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 P4ha3Q6W3F0 542 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Olfr798Q7TRH8 311 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Pgrmc2Q80UU9 217 aaKnown RBP10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Zfp709Q8VC29 727 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Slc35c2Q8VCX2 364 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Efcab7Q8VDY4 628 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Slc39a3Q99K24 317 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Haus5Q9D786 619 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Sars2Q9JJL8 518 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Capn15Q9JLG8 1095 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Usp21Q9QZL6 566 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Gpc6Q9R087 555 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 4931406B18RikA2RSL7 367 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Fbxw9F8VPX2 458 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 PtgisO35074 501 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 AgxtO35423 414 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 GnazO70443 355 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Mmp14P53690 582 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 PamP97467 979 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Gcnt3Q5JCT0 437 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Colgalt2Q6NVG7 625 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Rxfp1Q6R6I7 758 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Olfr301Q7TS04 311 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Noc4lQ8BHY2 516 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Acsm2Q8K0L3 575 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Eif3mQ99JX4 374 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Lrrc40Q9CRC8 602 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ttc25Q9D4B2 624 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Prl2b1Q9DAZ2 228 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Tysnd1Q9DBA6 568 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Ccdc120A2AEV7 629 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 2610021A01RikE9Q0Q3 834 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Cxcr3O88410 367 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Glb1P23780 647 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 MipP51180 263 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 AdslP54822 484 aa10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 PrkciQ62074 595 aaKnown RBP10.87□□□□□ -0.67
Ciita-201ENSMUST00000023147 Thoc7Q7TMY4 204 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms