RNA–Protein interactions for RNA: ENST00000642100.1

CASC19-279, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-279ENST00000642100 USP17L19D6RCP7 530 aa11.55□□□□□ -0.56
CASC19-279ENST00000642100 USP17L20D6RJB6 530 aa11.55□□□□□ -0.56
CASC19-279ENST00000642100 PPEF1O14829 653 aaPredicted RBP11.55□□□□□ -0.56
CASC19-279ENST00000642100 USP17L24Q0WX57 530 aa11.55□□□□□ -0.56
CASC19-279ENST00000642100 DNAJC14Q6Y2X3 702 aaPredicted RBP11.55□□□□□ -0.56
CASC19-279ENST00000642100 ZNF592Q92610 1267 aa11.55□□□□□ -0.56
CASC19-279ENST00000642100 SIRT1Q96EB6 747 aa11.55□□□□□ -0.56
CASC19-279ENST00000642100 THAP11Q96EK4 314 aa11.55□□□□□ -0.56
CASC19-279ENST00000642100 SPSB2Q99619 263 aa11.55□□□□□ -0.56
CASC19-279ENST00000642100 IGSF5Q9NSI5 407 aa11.55□□□□□ -0.56
CASC19-279ENST00000642100 MKRN1Q9UHC7 482 aaKnown RBP11.55□□□□□ -0.56
CASC19-279ENST00000642100 FKBPLQ9UIM3 349 aa11.55□□□□□ -0.56
CASC19-279ENST00000642100 FAM200AQ8TCP9 573 aa11.54□□□□□ -0.56
CASC19-279ENST00000642100 CLP1Q92989 425 aaKnown RBP11.54□□□□□ -0.56
CASC19-279ENST00000642100 EMID1Q96A84 441 aaPredicted RBP11.54□□□□□ -0.56
CASC19-279ENST00000642100 CDCA7Q9BWT1 371 aaPredicted RBP11.54□□□□□ -0.56
CASC19-279ENST00000642100 SLC6A16Q9GZN6 736 aa11.54□□□□□ -0.56
CASC19-279ENST00000642100 ZC3H4Q9UPT8 1303 aaKnown RBP11.54□□□□□ -0.56
CASC19-279ENST00000642100 SOWAHDA6NJG2 315 aa11.53□□□□□ -0.56
CASC19-279ENST00000642100 ANKLE1Q8NAG6 615 aa11.53□□□□□ -0.56
CASC19-279ENST00000642100 ATP5J2-PTCD1G3V325 749 aa11.52□□□□□ -0.57
CASC19-279ENST00000642100 LZTS3O60299 673 aaPredicted RBP11.52□□□□□ -0.57
CASC19-279ENST00000642100 MRRFQ96E11 262 aaKnown RBP11.52□□□□□ -0.57
CASC19-279ENST00000642100 RASA1P20936 1047 aa11.51□□□□□ -0.57
CASC19-279ENST00000642100 PTK7Q13308 1070 aa11.51□□□□□ -0.57
CASC19-279ENST00000642100 CRTC2Q53ET0 693 aaPredicted RBP11.51□□□□□ -0.57
CASC19-279ENST00000642100 SALL2Q9Y467 1007 aaPredicted RBP11.51□□□□□ -0.57
CASC19-279ENST00000642100 BRICD5Q6PL45 260 aa11.5□□□□□ -0.57
CASC19-279ENST00000642100 DEPDC4Q8N2C3 294 aa11.5□□□□□ -0.57
CASC19-279ENST00000642100 FMNL1O95466 1100 aaPredicted RBP11.49□□□□□ -0.57
CASC19-279ENST00000642100 SLC19A1P41440 591 aa11.49□□□□□ -0.57
CASC19-279ENST00000642100 MARSP56192 900 aaKnown RBP11.49□□□□□ -0.57
CASC19-279ENST00000642100 MCCD1P59942 119 aaPredicted RBP11.49□□□□□ -0.57
CASC19-279ENST00000642100 SLFNL1Q499Z3 407 aa11.49□□□□□ -0.57
CASC19-279ENST00000642100 FAM160A2Q8N612 972 aaPredicted RBP11.49□□□□□ -0.57
CASC19-279ENST00000642100 FAM174AQ8TBP5 190 aa11.49□□□□□ -0.57
CASC19-279ENST00000642100 BCL2L13Q9BXK5 485 aa11.49□□□□□ -0.57
CASC19-279ENST00000642100 ATP2B4P23634 1241 aa11.48□□□□□ -0.57
CASC19-279ENST00000642100 FAM69CQ0P6D2 419 aa11.48□□□□□ -0.57
CASC19-279ENST00000642100 ANKMY2Q8IV38 441 aa11.48□□□□□ -0.57
CASC19-279ENST00000642100 KIAA1522Q9P206 1035 aaPredicted RBP11.48□□□□□ -0.57
CASC19-279ENST00000642100 GFRA3O60609 400 aa11.47□□□□□ -0.57
CASC19-279ENST00000642100 HMGB1P09429 215 aaKnown RBP11.47□□□□□ -0.57
CASC19-279ENST00000642100 ZNF16P17020 682 aaPredicted RBP11.47□□□□□ -0.57
CASC19-279ENST00000642100 SWI5Q1ZZU3 235 aa11.47□□□□□ -0.57
CASC19-279ENST00000642100 SLAIN2Q9P270 581 aa11.47□□□□□ -0.57
CASC19-279ENST00000642100 CEP126Q9P2H0 1117 aa11.47□□□□□ -0.57
CASC19-279ENST00000642100 NCOA4Q13772 614 aa11.46□□□□□ -0.57
CASC19-279ENST00000642100 LAPTM4AQ15012 233 aa11.46□□□□□ -0.57
CASC19-279ENST00000642100 PLA2G2CQ5R387 149 aa11.46□□□□□ -0.57
CASC19-279ENST00000642100 RNF19BQ6ZMZ0 732 aa11.46□□□□□ -0.57
CASC19-279ENST00000642100 LIAT1Q6ZQX7 453 aa11.46□□□□□ -0.57
CASC19-279ENST00000642100 RNF135Q8IUD6 432 aa11.45□□□□□ -0.58
CASC19-279ENST00000642100 BIN2Q9UBW5 565 aaPredicted RBP11.45□□□□□ -0.58
CASC19-279ENST00000642100 SERPINB4P48594 390 aa11.44□□□□□ -0.58
CASC19-279ENST00000642100 SPRYD7Q5W111 196 aa11.44□□□□□ -0.58
CASC19-279ENST00000642100 USB1Q9BQ65 265 aaKnown RBP11.44□□□□□ -0.58
CASC19-279ENST00000642100 GPSM3Q9Y4H4 160 aa11.44□□□□□ -0.58
CASC19-279ENST00000642100 F12P00748 615 aaPredicted RBP11.43□□□□□ -0.58
CASC19-279ENST00000642100 MAP7D1Q3KQU3 841 aa11.43□□□□□ -0.58
CASC19-279ENST00000642100 PLPP7Q8NBV4 271 aa11.43□□□□□ -0.58
CASC19-279ENST00000642100 C1orf216Q8TAB5 229 aa11.43□□□□□ -0.58
CASC19-279ENST00000642100 PTK2Q05397 1052 aa11.42□□□□□ -0.58
CASC19-279ENST00000642100 EML3Q32P44 896 aa11.42□□□□□ -0.58
CASC19-279ENST00000642100 MSS51Q4VC12 460 aa11.42□□□□□ -0.58
CASC19-279ENST00000642100 ZNF326Q5BKZ1 582 aaKnown RBP11.42□□□□□ -0.58
CASC19-279ENST00000642100 TRIM50Q86XT4 487 aa11.42□□□□□ -0.58
CASC19-279ENST00000642100 GIPC2Q8TF65 315 aa11.42□□□□□ -0.58
CASC19-279ENST00000642100 PRDM9Q9NQV7 894 aa11.42□□□□□ -0.58
CASC19-279ENST00000642100 DPYDQ12882 1025 aa11.41□□□□□ -0.58
CASC19-279ENST00000642100 PTPRNQ16849 979 aa11.41□□□□□ -0.58
CASC19-279ENST00000642100 NOM1Q5C9Z4 860 aaKnown RBP11.41□□□□□ -0.58
CASC19-279ENST00000642100 Q6ZNB5 142 aa11.41□□□□□ -0.58
CASC19-279ENST00000642100 PHTF2Q8N3S3 785 aa11.41□□□□□ -0.58
CASC19-279ENST00000642100 NRG2O14511 850 aaPredicted RBP11.4□□□□□ -0.58
CASC19-279ENST00000642100 ATP1A2P50993 1020 aa11.4□□□□□ -0.58
CASC19-279ENST00000642100 TRIM67Q6ZTA4 783 aa11.4□□□□□ -0.58
CASC19-279ENST00000642100 ZNF598Q86UK7 904 aaKnown RBP11.4□□□□□ -0.58
CASC19-279ENST00000642100 OGFOD1Q8N543 542 aa11.4□□□□□ -0.58
CASC19-279ENST00000642100 ARMC2Q8NEN0 867 aa11.4□□□□□ -0.58
CASC19-279ENST00000642100 GPKOWQ92917 476 aaPredicted RBP eCLIP11.4□□□□□ -0.58
CASC19-279ENST00000642100 PDZRN3Q9UPQ7 1066 aa11.4□□□□□ -0.58
CASC19-279ENST00000642100 ANKRD33BA6NCL7 494 aa11.39□□□□□ -0.59
CASC19-279ENST00000642100 PDXDC2PQ6P474 469 aa11.39□□□□□ -0.59
CASC19-279ENST00000642100 MAP10Q9P2G4 905 aa11.39□□□□□ -0.59
CASC19-279ENST00000642100 FCF1Q9Y324 198 aaKnown RBP11.39□□□□□ -0.59
CASC19-279ENST00000642100 PCDHB9Q9Y5E1 797 aa11.39□□□□□ -0.59
CASC19-279ENST00000642100 CTHP32929 405 aa11.38□□□□□ -0.59
CASC19-279ENST00000642100 DNAAF2Q9NVR5 837 aaKnown RBP11.38□□□□□ -0.59
CASC19-279ENST00000642100 EGFL7Q9UHF1 273 aa11.38□□□□□ -0.59
CASC19-279ENST00000642100 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
CASC19-279ENST00000642100 TCF3P15923 654 aa11.37□□□□□ -0.59
CASC19-279ENST00000642100 JUNDP17535 347 aa11.37□□□□□ -0.59
CASC19-279ENST00000642100 NOD1Q9Y239 953 aa11.37□□□□□ -0.59
CASC19-279ENST00000642100 LCE2BO14633 110 aa11.36□□□□□ -0.59
CASC19-279ENST00000642100 MMP16P51512 607 aa11.36□□□□□ -0.59
CASC19-279ENST00000642100 KCNH2Q12809 1159 aa11.36□□□□□ -0.59
CASC19-279ENST00000642100 NPAS4Q8IUM7 802 aa11.36□□□□□ -0.59
CASC19-279ENST00000642100 LARGE2Q8N3Y3 721 aa11.36□□□□□ -0.59
CASC19-279ENST00000642100 ZNF697Q5TEC3 545 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms