RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 EXOC5O00471 708 aa21.72■■□□□ 1.07
SRRM4-204ENST00000641899 ZNF692Q9BU19 519 aaPredicted RBP21.72■■□□□ 1.07
SRRM4-204ENST00000641899 KIAA1210Q9ULL0 1709 aa21.7■■□□□ 1.06
SRRM4-204ENST00000641899 TXNRD1Q16881 649 aa21.7■■□□□ 1.06
SRRM4-204ENST00000641899 NBPF1Q3BBV0 1214 aa21.7■■□□□ 1.06
SRRM4-204ENST00000641899 MARCH10Q8NA82 808 aaPredicted RBP21.7■■□□□ 1.06
SRRM4-204ENST00000641899 CARD10Q9BWT7 1032 aa21.7■■□□□ 1.06
SRRM4-204ENST00000641899 EVC2Q86UK5 1308 aa21.7■■□□□ 1.06
SRRM4-204ENST00000641899 SLC15A2Q16348 729 aa21.69■■□□□ 1.06
SRRM4-204ENST00000641899 MTFR1LQ9H019 292 aa21.69■■□□□ 1.06
SRRM4-204ENST00000641899 ATF5Q9Y2D1 282 aaPredicted RBP21.69■■□□□ 1.06
SRRM4-204ENST00000641899 SLIT3O75094 1523 aa21.68■■□□□ 1.06
SRRM4-204ENST00000641899 PEAK1Q9H792 1746 aa21.67■■□□□ 1.06
SRRM4-204ENST00000641899 CPSF1Q10570 1443 aaKnown RBP21.67■■□□□ 1.06
SRRM4-204ENST00000641899 LRRC37A3O60309 1634 aa21.66■■□□□ 1.06
SRRM4-204ENST00000641899 CCDC7Q96M83 1385 aa21.66■■□□□ 1.06
SRRM4-204ENST00000641899 PTGER2P43116 358 aa21.66■■□□□ 1.06
SRRM4-204ENST00000641899 ARHGEF25Q86VW2 580 aa21.66■■□□□ 1.06
SRRM4-204ENST00000641899 PROM2Q8N271 834 aa21.66■■□□□ 1.06
SRRM4-204ENST00000641899 ZNF784Q8NCA9 323 aaPredicted RBP21.66■■□□□ 1.06
SRRM4-204ENST00000641899 TTC21AQ8NDW8 1320 aa21.65■■□□□ 1.06
SRRM4-204ENST00000641899 SYT17Q9BSW7 474 aa21.65■■□□□ 1.06
SRRM4-204ENST00000641899 FHDC1Q9C0D6 1143 aaPredicted RBP21.65■■□□□ 1.06
SRRM4-204ENST00000641899 AXIN2Q9Y2T1 843 aa21.65■■□□□ 1.06
SRRM4-204ENST00000641899 PDGFDQ9GZP0 370 aaPredicted RBP21.63■■□□□ 1.05
SRRM4-204ENST00000641899 TTC21BQ7Z4L5 1316 aa21.62■■□□□ 1.05
SRRM4-204ENST00000641899 SOX12O15370 315 aa21.62■■□□□ 1.05
SRRM4-204ENST00000641899 PTF1AQ7RTS3 328 aa21.62■■□□□ 1.05
SRRM4-204ENST00000641899 ARXQ96QS3 562 aa21.61■■□□□ 1.05
SRRM4-204ENST00000641899 CASZ1Q86V15 1759 aa21.61■■□□□ 1.05
SRRM4-204ENST00000641899 TNS2Q63HR2 1409 aa21.57■■□□□ 1.04
SRRM4-204ENST00000641899 SENP3-EIF4A1A0A087X0R7 540 aa21.57■■□□□ 1.04
SRRM4-204ENST00000641899 SBF2Q86WG5 1849 aa21.57■■□□□ 1.04
SRRM4-204ENST00000641899 QRICH2Q9H0J4 1663 aa21.56■■□□□ 1.04
SRRM4-204ENST00000641899 ABCC6O95255 1503 aa21.55■■□□□ 1.04
SRRM4-204ENST00000641899 C1QTNF8P60827 252 aa21.55■■□□□ 1.04
SRRM4-204ENST00000641899 GPR162Q16538 588 aa21.55■■□□□ 1.04
SRRM4-204ENST00000641899 NLRP2Q9NX02 1062 aa21.55■■□□□ 1.04
SRRM4-204ENST00000641899 MAP3K5Q99683 1374 aa21.55■■□□□ 1.04
SRRM4-204ENST00000641899 MYOM1P52179 1685 aa21.55■■□□□ 1.04
SRRM4-204ENST00000641899 KTN1Q86UP2 1357 aaKnown RBP21.54■■□□□ 1.04
SRRM4-204ENST00000641899 IL2RBP14784 551 aa21.54■■□□□ 1.04
SRRM4-204ENST00000641899 POLD1P28340 1107 aa21.54■■□□□ 1.04
SRRM4-204ENST00000641899 SGIP1Q9BQI5 828 aa21.54■■□□□ 1.04
SRRM4-204ENST00000641899 AKAP12Q02952 1782 aa21.53■■□□□ 1.04
SRRM4-204ENST00000641899 PIK3C2AO00443 1686 aa21.53■■□□□ 1.04
SRRM4-204ENST00000641899 SLC16A10Q8TF71 515 aa21.53■■□□□ 1.04
SRRM4-204ENST00000641899 ACSBG1Q96GR2 724 aa21.53■■□□□ 1.04
SRRM4-204ENST00000641899 COL18A1P39060 1754 aa21.53■■□□□ 1.04
SRRM4-204ENST00000641899 TRPM1Q7Z4N2 1603 aa21.51■■□□□ 1.03
SRRM4-204ENST00000641899 SLC27A3Q5K4L6 730 aa21.5■■□□□ 1.03
SRRM4-204ENST00000641899 ERBB3P21860 1342 aa21.5■■□□□ 1.03
SRRM4-204ENST00000641899 WNK3Q9BYP7 1800 aa21.5■■□□□ 1.03
SRRM4-204ENST00000641899 ROCK2O75116 1388 aaKnown RBP21.49■■□□□ 1.03
SRRM4-204ENST00000641899 GIGYF1O75420 1035 aaPredicted RBP21.47■■□□□ 1.03
SRRM4-204ENST00000641899 NFAT5O94916 1531 aa21.46■■□□□ 1.03
SRRM4-204ENST00000641899 HDGFL2Q7Z4V5 671 aaPredicted RBP21.46■■□□□ 1.03
SRRM4-204ENST00000641899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.46■■□□□ 1.03
SRRM4-204ENST00000641899 KLHL34Q8N239 644 aa21.46■■□□□ 1.03
SRRM4-204ENST00000641899 L3MBTL2Q969R5 705 aa21.46■■□□□ 1.03
SRRM4-204ENST00000641899 USP31Q70CQ4 1352 aa21.46■■□□□ 1.03
SRRM4-204ENST00000641899 UTRNP46939 3433 aa21.45■■□□□ 1.02
SRRM4-204ENST00000641899 NHSQ6T4R5 1651 aa21.45■■□□□ 1.02
SRRM4-204ENST00000641899 ANKRD24Q8TF21 1146 aa21.45■■□□□ 1.02
SRRM4-204ENST00000641899 HMGB2P26583 209 aaKnown RBP21.44■■□□□ 1.02
SRRM4-204ENST00000641899 PELP1Q8IZL8 1130 aaKnown RBP21.44■■□□□ 1.02
SRRM4-204ENST00000641899 TFCP2L1Q9NZI6 479 aa21.44■■□□□ 1.02
SRRM4-204ENST00000641899 ZNF827Q17R98 1081 aa21.42■■□□□ 1.02
SRRM4-204ENST00000641899 GRIN3BO60391 1043 aa21.41■■□□□ 1.02
SRRM4-204ENST00000641899 TMC1Q8TDI8 760 aa21.41■■□□□ 1.02
SRRM4-204ENST00000641899 AKT1S1Q96B36 256 aa21.41■■□□□ 1.02
SRRM4-204ENST00000641899 DDX54Q8TDD1 881 aaKnown RBP21.4■■□□□ 1.02
SRRM4-204ENST00000641899 LRRC4BQ9NT99 713 aa21.4■■□□□ 1.02
SRRM4-204ENST00000641899 TERF2IPQ9NYB0 399 aa21.4■■□□□ 1.02
SRRM4-204ENST00000641899 NME9Q86XW9 330 aa21.38■■□□□ 1.01
SRRM4-204ENST00000641899 SYTL4Q96C24 671 aaPredicted RBP21.38■■□□□ 1.01
SRRM4-204ENST00000641899 SBNO2Q9Y2G9 1366 aa21.37■■□□□ 1.01
SRRM4-204ENST00000641899 PAPPAQ13219 1627 aa21.37■■□□□ 1.01
SRRM4-204ENST00000641899 CHD4Q14839 1912 aa21.37■■□□□ 1.01
SRRM4-204ENST00000641899 RGPD5Q99666 1765 aa21.36■■□□□ 1.01
SRRM4-204ENST00000641899 IP6K1Q92551 441 aa21.35■■□□□ 1.01
SRRM4-204ENST00000641899 PNPLA7Q6ZV29 1317 aa21.34■■□□□ 1.01
SRRM4-204ENST00000641899 MSH5O43196 834 aa21.34■■□□□ 1.01
SRRM4-204ENST00000641899 EDC4Q6P2E9 1401 aaKnown RBP21.34■■□□□ 1.01
SRRM4-204ENST00000641899 ANKRD36BQ8N2N9 1353 aa21.33■■□□□ 1
SRRM4-204ENST00000641899 PRIM1P49642 420 aaKnown RBP21.32■■□□□ 1
SRRM4-204ENST00000641899 NEUROD1Q13562 356 aa21.32■■□□□ 1
SRRM4-204ENST00000641899 IFFO2Q5TF58 517 aa21.31■■□□□ 1
SRRM4-204ENST00000641899 LTV1Q96GA3 475 aaPredicted RBP21.31■■□□□ 1
SRRM4-204ENST00000641899 CARD11Q9BXL7 1154 aa21.31■■□□□ 1
SRRM4-204ENST00000641899 CCNL1Q9UK58 526 aaPredicted RBP21.31■■□□□ 1
SRRM4-204ENST00000641899 BTAF1O14981 1849 aa21.31■■□□□ 1
SRRM4-204ENST00000641899 PUS7Q96PZ0 661 aaKnown RBP21.3■■□□□ 1
SRRM4-204ENST00000641899 MON2Q7Z3U7 1717 aa21.29■■□□□ 1
SRRM4-204ENST00000641899 USP47Q96K76 1375 aa21.29■■□□□ 1
SRRM4-204ENST00000641899 SLC24A1O60721 1099 aa21.29■■□□□ 1
SRRM4-204ENST00000641899 AMPHP49418 695 aa21.29■■□□□ 1
SRRM4-204ENST00000641899 ZCRB1Q8TBF4 217 aaKnown RBP21.29■■□□□ 1
SRRM4-204ENST00000641899 COG3Q96JB2 828 aa21.29■■□□□ 1
SRRM4-204ENST00000641899 SLC12A5Q9H2X9 1139 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms