RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 FAM98CQ17RN3 349 aaKnown RBP17.54■□□□□ 0.4
PHGDH-221ENST00000641573 NGDNQ8NEJ9 315 aaKnown RBP17.54■□□□□ 0.4
PHGDH-221ENST00000641573 RGPD1P0DJD0 1748 aa17.54■□□□□ 0.4
PHGDH-221ENST00000641573 USP6P35125 1406 aa17.54■□□□□ 0.4
PHGDH-221ENST00000641573 TTC21BQ7Z4L5 1316 aa17.53■□□□□ 0.4
PHGDH-221ENST00000641573 NME9Q86XW9 330 aa17.53■□□□□ 0.4
PHGDH-221ENST00000641573 ARHGEF10O15013 1369 aa17.53■□□□□ 0.4
PHGDH-221ENST00000641573 NRKQ7Z2Y5 1582 aa17.52■□□□□ 0.39
PHGDH-221ENST00000641573 MTHFSP49914 203 aa17.51■□□□□ 0.39
PHGDH-221ENST00000641573 WDR43Q15061 677 aaKnown RBP eCLIP17.51■□□□□ 0.39
PHGDH-221ENST00000641573 PHF8Q9UPP1 1060 aa17.51■□□□□ 0.39
PHGDH-221ENST00000641573 INSRP06213 1382 aa17.51■□□□□ 0.39
PHGDH-221ENST00000641573 SSH2Q76I76 1423 aa17.5■□□□□ 0.39
PHGDH-221ENST00000641573 COG3Q96JB2 828 aa17.49■□□□□ 0.39
PHGDH-221ENST00000641573 CFAP53Q96M91 514 aa17.49■□□□□ 0.39
PHGDH-221ENST00000641573 SBNO1A3KN83 1393 aa17.49■□□□□ 0.39
PHGDH-221ENST00000641573 ABCA3Q99758 1704 aa17.49■□□□□ 0.39
PHGDH-221ENST00000641573 TTC21AQ8NDW8 1320 aa17.48■□□□□ 0.39
PHGDH-221ENST00000641573 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
PHGDH-221ENST00000641573 FAM83GA6ND36 823 aa17.48■□□□□ 0.39
PHGDH-221ENST00000641573 BTG4Q9NY30 223 aa17.48■□□□□ 0.39
PHGDH-221ENST00000641573 ADAMTS8Q9UP79 889 aa17.48■□□□□ 0.39
PHGDH-221ENST00000641573 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
PHGDH-221ENST00000641573 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
PHGDH-221ENST00000641573 FAM182BQ5T319 152 aa17.47■□□□□ 0.39
PHGDH-221ENST00000641573 NRAPQ86VF7 1730 aa17.45■□□□□ 0.38
PHGDH-221ENST00000641573 TRPM3Q9HCF6 1732 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-221ENST00000641573 EZH2Q15910 746 aaKnown RBP17.45■□□□□ 0.38
PHGDH-221ENST00000641573 OVOS2A0A0J9YW53 1432 aa17.44■□□□□ 0.38
PHGDH-221ENST00000641573 OVOS2Q6IE36 1432 aa17.44■□□□□ 0.38
PHGDH-221ENST00000641573 TNS1Q9HBL0 1735 aaKnown RBP17.44■□□□□ 0.38
PHGDH-221ENST00000641573 AATKQ6ZMQ8 1374 aa17.43■□□□□ 0.38
PHGDH-221ENST00000641573 SENP3-EIF4A1A0A087X0R7 540 aa17.42■□□□□ 0.38
PHGDH-221ENST00000641573 FBLN1P23142 703 aa17.42■□□□□ 0.38
PHGDH-221ENST00000641573 POLKQ9UBT6 870 aa17.42■□□□□ 0.38
PHGDH-221ENST00000641573 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-221ENST00000641573 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
PHGDH-221ENST00000641573 SPATA31A5Q5VU36 1347 aa17.42■□□□□ 0.38
PHGDH-221ENST00000641573 SPATA31A7Q8IWB4 1347 aa17.42■□□□□ 0.38
PHGDH-221ENST00000641573 ALS2Q96Q42 1657 aa17.42■□□□□ 0.38
PHGDH-221ENST00000641573 USP31Q70CQ4 1352 aa17.41■□□□□ 0.38
PHGDH-221ENST00000641573 COL3A1P02461 1466 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-221ENST00000641573 TRIM37O94972 964 aa17.4■□□□□ 0.38
PHGDH-221ENST00000641573 APBA3O96018 575 aa17.4■□□□□ 0.38
PHGDH-221ENST00000641573 FAM196AQ6ZSG2 479 aa17.4■□□□□ 0.38
PHGDH-221ENST00000641573 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
PHGDH-221ENST00000641573 SMG6Q86US8 1419 aaKnown RBP17.39■□□□□ 0.38
PHGDH-221ENST00000641573 PAK3O75914 559 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-221ENST00000641573 NBPF14Q5TI25 921 aa17.39■□□□□ 0.37
PHGDH-221ENST00000641573 PIK3C2AO00443 1686 aa17.39■□□□□ 0.37
PHGDH-221ENST00000641573 THSD7AQ9UPZ6 1657 aa17.39■□□□□ 0.37
PHGDH-221ENST00000641573 PPM1GO15355 546 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-221ENST00000641573 NUDCQ9Y266 331 aa17.38■□□□□ 0.37
PHGDH-221ENST00000641573 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
PHGDH-221ENST00000641573 DIAPH1O60610 1272 aaKnown RBP17.37■□□□□ 0.37
PHGDH-221ENST00000641573 RRS1Q15050 365 aaKnown RBP17.37■□□□□ 0.37
PHGDH-221ENST00000641573 CCDC146Q8IYE0 955 aa17.37■□□□□ 0.37
PHGDH-221ENST00000641573 CRYBG1Q9Y4K1 1723 aa17.36■□□□□ 0.37
PHGDH-221ENST00000641573 NLRP6P59044 892 aa17.36■□□□□ 0.37
PHGDH-221ENST00000641573 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
PHGDH-221ENST00000641573 SPON1Q9HCB6 807 aa17.36■□□□□ 0.37
PHGDH-221ENST00000641573 PRDM11Q9NQV5 511 aa17.36■□□□□ 0.37
PHGDH-221ENST00000641573 SALL2Q9Y467 1007 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-221ENST00000641573 MAP2P11137 1827 aaKnown RBP17.35■□□□□ 0.37
PHGDH-221ENST00000641573 U2SURPO15042 1029 aaKnown RBP17.34■□□□□ 0.37
PHGDH-221ENST00000641573 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-221ENST00000641573 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
PHGDH-221ENST00000641573 NUTM2GQ5VZR2 741 aa17.34■□□□□ 0.37
PHGDH-221ENST00000641573 USP54Q70EL1 1684 aa17.34■□□□□ 0.37
PHGDH-221ENST00000641573 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
PHGDH-221ENST00000641573 SOX12O15370 315 aa17.33■□□□□ 0.36
PHGDH-221ENST00000641573 RUNDC1Q96C34 613 aa17.33■□□□□ 0.36
PHGDH-221ENST00000641573 PDE3BQ13370 1112 aa17.32■□□□□ 0.36
PHGDH-221ENST00000641573 RREB1Q92766 1687 aa17.32■□□□□ 0.36
PHGDH-221ENST00000641573 APAF1O14727 1248 aa17.31■□□□□ 0.36
PHGDH-221ENST00000641573 KCNQ2O43526 872 aa17.3■□□□□ 0.36
PHGDH-221ENST00000641573 IL13P35225 146 aa17.3■□□□□ 0.36
PHGDH-221ENST00000641573 STRN4Q9NRL3 753 aa17.3■□□□□ 0.36
PHGDH-221ENST00000641573 NUP188Q5SRE5 1749 aa17.3■□□□□ 0.36
PHGDH-221ENST00000641573 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
PHGDH-221ENST00000641573 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
PHGDH-221ENST00000641573 PEAK1Q9H792 1746 aa17.28■□□□□ 0.36
PHGDH-221ENST00000641573 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
PHGDH-221ENST00000641573 GTF3C3Q9Y5Q9 886 aa17.28■□□□□ 0.36
PHGDH-221ENST00000641573 KIAA0232Q92628 1395 aa17.27■□□□□ 0.35
PHGDH-221ENST00000641573 AMPHP49418 695 aa17.26■□□□□ 0.35
PHGDH-221ENST00000641573 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
PHGDH-221ENST00000641573 FLT4P35916 1363 aa17.26■□□□□ 0.35
PHGDH-221ENST00000641573 FCHSD2O94868 740 aa17.25■□□□□ 0.35
PHGDH-221ENST00000641573 EVA1CP58658 441 aa17.25■□□□□ 0.35
PHGDH-221ENST00000641573 EIF4A2Q14240 407 aaKnown RBP17.25■□□□□ 0.35
PHGDH-221ENST00000641573 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
PHGDH-221ENST00000641573 HSP90AB2PQ58FF8 381 aa17.25■□□□□ 0.35
PHGDH-221ENST00000641573 TCP11L2Q8N4U5 519 aa17.25■□□□□ 0.35
PHGDH-221ENST00000641573 KCNH5Q8NCM2 988 aa17.25■□□□□ 0.35
PHGDH-221ENST00000641573 PLEKHF1Q96S99 279 aa17.25■□□□□ 0.35
PHGDH-221ENST00000641573 KIF24Q5T7B8 1368 aa17.25■□□□□ 0.35
PHGDH-221ENST00000641573 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
PHGDH-221ENST00000641573 BARGINQ6ZT62 677 aa17.24■□□□□ 0.35
PHGDH-221ENST00000641573 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms