RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 PTCH1Q13635 1447 aa17.06■□□□□ 0.32
PAX6-280ENST00000640872 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
PAX6-280ENST00000640872 CLEC17AQ6ZS10 378 aa17.06■□□□□ 0.32
PAX6-280ENST00000640872 MYO5BQ9ULV0 1848 aa17.05■□□□□ 0.32
PAX6-280ENST00000640872 CLTCQ00610 1675 aaKnown RBP17.05■□□□□ 0.32
PAX6-280ENST00000640872 ANKRD45Q5TZF3 282 aa17.05■□□□□ 0.32
PAX6-280ENST00000640872 ATAD2Q6PL18 1390 aa17.03■□□□□ 0.32
PAX6-280ENST00000640872 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
PAX6-280ENST00000640872 HSP90AA2PQ14568 343 aaPredicted RBP17.03■□□□□ 0.32
PAX6-280ENST00000640872 GLIPR1L2Q4G1C9 344 aa17.03■□□□□ 0.32
PAX6-280ENST00000640872 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
PAX6-280ENST00000640872 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
PAX6-280ENST00000640872 FAM135BQ49AJ0 1406 aa17.03■□□□□ 0.32
PAX6-280ENST00000640872 SSFA2P28290 1259 aa17.03■□□□□ 0.32
PAX6-280ENST00000640872 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
PAX6-280ENST00000640872 GAS2L2Q8NHY3 880 aa17.03■□□□□ 0.32
PAX6-280ENST00000640872 ARHGAP45Q92619 1136 aa17.03■□□□□ 0.32
PAX6-280ENST00000640872 PREX1Q8TCU6 1659 aa17.03■□□□□ 0.32
PAX6-280ENST00000640872 ZFYVE9O95405 1425 aa17.03■□□□□ 0.32
PAX6-280ENST00000640872 MRPL50Q8N5N7 158 aaKnown RBP17.02■□□□□ 0.32
PAX6-280ENST00000640872 CHMP4BQ9H444 224 aaKnown RBP17.02■□□□□ 0.32
PAX6-280ENST00000640872 PTPRMP28827 1452 aa17.02■□□□□ 0.32
PAX6-280ENST00000640872 FCHSD2O94868 740 aa17.02■□□□□ 0.31
PAX6-280ENST00000640872 CCDC173Q0VFZ6 552 aa17.02■□□□□ 0.31
PAX6-280ENST00000640872 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.31
PAX6-280ENST00000640872 PPP1R9BQ96SB3 815 aa17.02■□□□□ 0.31
PAX6-280ENST00000640872 C1orf115Q9H7X2 142 aa17.02■□□□□ 0.31
PAX6-280ENST00000640872 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.31
PAX6-280ENST00000640872 KIF20BQ96Q89 1820 aa17.02■□□□□ 0.31
PAX6-280ENST00000640872 TMEM131LA2VDJ0 1609 aa17.01■□□□□ 0.31
PAX6-280ENST00000640872 VAMP4O75379 141 aa17■□□□□ 0.31
PAX6-280ENST00000640872 KLHL40Q2TBA0 621 aa17■□□□□ 0.31
PAX6-280ENST00000640872 ABCC4O15439 1325 aa17■□□□□ 0.31
PAX6-280ENST00000640872 CDC45O75419 566 aa17■□□□□ 0.31
PAX6-280ENST00000640872 TRHP20396 242 aaPredicted RBP17■□□□□ 0.31
PAX6-280ENST00000640872 BAG4O95429 457 aaKnown RBP16.99■□□□□ 0.31
PAX6-280ENST00000640872 GOLGA6L22H0YM25 854 aa16.99■□□□□ 0.31
PAX6-280ENST00000640872 PRKAR2BP31323 418 aa16.98■□□□□ 0.31
PAX6-280ENST00000640872 NASPP49321 788 aaPredicted RBP16.98■□□□□ 0.31
PAX6-280ENST00000640872 TPM2P07951 284 aa16.97■□□□□ 0.31
PAX6-280ENST00000640872 STAG3Q9UJ98 1225 aa16.97■□□□□ 0.31
PAX6-280ENST00000640872 GSPT1P15170 499 aaKnown RBP16.97■□□□□ 0.31
PAX6-280ENST00000640872 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.31
PAX6-280ENST00000640872 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
PAX6-280ENST00000640872 PRAM1Q96QH2 718 aa16.96■□□□□ 0.31
PAX6-280ENST00000640872 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.31
PAX6-280ENST00000640872 DDX49Q9Y6V7 483 aaKnown RBP16.96■□□□□ 0.31
PAX6-280ENST00000640872 NFE2L2Q16236 605 aa16.95■□□□□ 0.3
PAX6-280ENST00000640872 RABEP1Q15276 862 aa16.95■□□□□ 0.3
PAX6-280ENST00000640872 ZSCAN30Q86W11 494 aa16.95■□□□□ 0.3
PAX6-280ENST00000640872 CYP2E1P05181 493 aaPredicted RBP16.94■□□□□ 0.3
PAX6-280ENST00000640872 ZNF445P59923 1031 aa16.94■□□□□ 0.3
PAX6-280ENST00000640872 HDGFL2Q7Z4V5 671 aaPredicted RBP16.94■□□□□ 0.3
PAX6-280ENST00000640872 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
PAX6-280ENST00000640872 AK9Q5TCS8 1911 aa16.94■□□□□ 0.3
PAX6-280ENST00000640872 ZNF853P0CG23 659 aa16.94■□□□□ 0.3
PAX6-280ENST00000640872 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
PAX6-280ENST00000640872 PLEKHM2Q8IWE5 1019 aa16.94■□□□□ 0.3
PAX6-280ENST00000640872 PHACTR3Q96KR7 559 aa16.94■□□□□ 0.3
PAX6-280ENST00000640872 THUMPD2Q9BTF0 503 aaKnown RBP16.94■□□□□ 0.3
PAX6-280ENST00000640872 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
PAX6-280ENST00000640872 GNAI1P63096 354 aa16.93■□□□□ 0.3
PAX6-280ENST00000640872 POLKQ9UBT6 870 aa16.93■□□□□ 0.3
PAX6-280ENST00000640872 ARHGEF40Q8TER5 1519 aa16.93■□□□□ 0.3
PAX6-280ENST00000640872 MBIPQ9NS73 344 aa16.92■□□□□ 0.3
PAX6-280ENST00000640872 KIF24Q5T7B8 1368 aa16.92■□□□□ 0.3
PAX6-280ENST00000640872 NUCB2P80303 420 aa16.92■□□□□ 0.3
PAX6-280ENST00000640872 CFAP44Q96MT7 982 aa16.92■□□□□ 0.3
PAX6-280ENST00000640872 TTC22Q5TAA0 569 aa16.91■□□□□ 0.3
PAX6-280ENST00000640872 ANP32BQ92688 251 aaKnown RBP16.91■□□□□ 0.3
PAX6-280ENST00000640872 AGLP35573 1532 aa16.91■□□□□ 0.3
PAX6-280ENST00000640872 OFD1O75665 1012 aa16.91■□□□□ 0.3
PAX6-280ENST00000640872 KIAA1211Q6ZU35 1233 aa16.91■□□□□ 0.3
PAX6-280ENST00000640872 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
PAX6-280ENST00000640872 VSIG10Q8N0Z9 540 aa16.91■□□□□ 0.3
PAX6-280ENST00000640872 DCTPP1Q9H773 170 aa16.91■□□□□ 0.3
PAX6-280ENST00000640872 LMBRD1Q9NUN5 540 aa16.91■□□□□ 0.3
PAX6-280ENST00000640872 TWISTNBQ3B726 338 aaPredicted RBP16.9■□□□□ 0.3
PAX6-280ENST00000640872 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
PAX6-280ENST00000640872 USP26Q9BXU7 913 aa16.9■□□□□ 0.3
PAX6-280ENST00000640872 API5Q9BZZ5 524 aaKnown RBP16.9■□□□□ 0.3
PAX6-280ENST00000640872 CABP1Q9NZU7 370 aa16.89■□□□□ 0.3
PAX6-280ENST00000640872 MAP2P11137 1827 aaKnown RBP16.89■□□□□ 0.29
PAX6-280ENST00000640872 A2ML1A8K2U0 1454 aa16.89■□□□□ 0.29
PAX6-280ENST00000640872 ALKQ9UM73 1620 aa16.89■□□□□ 0.29
PAX6-280ENST00000640872 ELL2O00472 640 aaPredicted RBP16.89■□□□□ 0.29
PAX6-280ENST00000640872 HMOX1P09601 288 aa16.89■□□□□ 0.29
PAX6-280ENST00000640872 ZSCAN23Q3MJ62 389 aa16.89■□□□□ 0.29
PAX6-280ENST00000640872 CDK19Q9BWU1 502 aa16.89■□□□□ 0.29
PAX6-280ENST00000640872 FBLN1P23142 703 aa16.88■□□□□ 0.29
PAX6-280ENST00000640872 HS1BP3Q53T59 392 aa16.88■□□□□ 0.29
PAX6-280ENST00000640872 DLG5Q8TDM6 1919 aa16.88■□□□□ 0.29
PAX6-280ENST00000640872 ATP10DQ9P241 1426 aa16.87■□□□□ 0.29
PAX6-280ENST00000640872 PKP1Q13835 747 aa16.87■□□□□ 0.29
PAX6-280ENST00000640872 CAVIN1Q6NZI2 390 aaKnown RBP16.87■□□□□ 0.29
PAX6-280ENST00000640872 C8orf58Q8NAV2 365 aa16.87■□□□□ 0.29
PAX6-280ENST00000640872 PKNOX2Q96KN3 472 aa16.87■□□□□ 0.29
PAX6-280ENST00000640872 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
PAX6-280ENST00000640872 ATP7BP35670 1465 aa16.87■□□□□ 0.29
PAX6-280ENST00000640872 PDLIM2Q96JY6 352 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms