RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 HSP90AB2PQ58FF8 381 aa9.68□□□□□ -0.86
NECAP1-224ENST00000640099 CPS1P31327 1500 aa9.67□□□□□ -0.86
NECAP1-224ENST00000640099 ROBO2Q9HCK4 1378 aa9.67□□□□□ -0.86
NECAP1-224ENST00000640099 MRPL50Q8N5N7 158 aaKnown RBP9.67□□□□□ -0.86
NECAP1-224ENST00000640099 TBC1D32Q96NH3 1257 aa9.67□□□□□ -0.86
NECAP1-224ENST00000640099 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
NECAP1-224ENST00000640099 ACEP12821 1306 aa9.67□□□□□ -0.86
NECAP1-224ENST00000640099 GNAI1P63096 354 aa9.67□□□□□ -0.86
NECAP1-224ENST00000640099 GSE1Q14687 1217 aa9.67□□□□□ -0.86
NECAP1-224ENST00000640099 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
NECAP1-224ENST00000640099 FAM135BQ49AJ0 1406 aa9.66□□□□□ -0.86
NECAP1-224ENST00000640099 EIF4A2Q14240 407 aaKnown RBP9.66□□□□□ -0.86
NECAP1-224ENST00000640099 BRPF3Q9ULD4 1205 aa9.66□□□□□ -0.86
NECAP1-224ENST00000640099 HDAC1Q13547 482 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-224ENST00000640099 AAMPQ13685 434 aa9.66□□□□□ -0.86
NECAP1-224ENST00000640099 C22orf23Q9BZE7 217 aa9.66□□□□□ -0.86
NECAP1-224ENST00000640099 TNRQ92752 1358 aa9.66□□□□□ -0.86
NECAP1-224ENST00000640099 FOXO3O43524 673 aa9.66□□□□□ -0.86
NECAP1-224ENST00000640099 EDC4Q6P2E9 1401 aaKnown RBP9.65□□□□□ -0.86
NECAP1-224ENST00000640099 HDGFP51858 240 aaKnown RBP9.65□□□□□ -0.86
NECAP1-224ENST00000640099 ALDH1L2Q3SY69 923 aa9.65□□□□□ -0.86
NECAP1-224ENST00000640099 SMC5Q8IY18 1101 aa9.65□□□□□ -0.86
NECAP1-224ENST00000640099 PPP6R1Q9UPN7 881 aa9.65□□□□□ -0.86
NECAP1-224ENST00000640099 MED14O60244 1454 aa9.65□□□□□ -0.87
NECAP1-224ENST00000640099 TTC21BQ7Z4L5 1316 aa9.65□□□□□ -0.87
NECAP1-224ENST00000640099 ZBTB7BO15156 539 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-224ENST00000640099 CHD1LQ86WJ1 897 aa9.64□□□□□ -0.87
NECAP1-224ENST00000640099 NECTIN2Q92692 538 aa9.64□□□□□ -0.87
NECAP1-224ENST00000640099 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
NECAP1-224ENST00000640099 IFT57Q9NWB7 429 aa9.64□□□□□ -0.87
NECAP1-224ENST00000640099 CPSF1Q10570 1443 aaKnown RBP9.64□□□□□ -0.87
NECAP1-224ENST00000640099 NCBP3Q53F19 620 aaKnown RBP9.64□□□□□ -0.87
NECAP1-224ENST00000640099 C14orf37Q86TY3 774 aa9.64□□□□□ -0.87
NECAP1-224ENST00000640099 LTV1Q96GA3 475 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-224ENST00000640099 ATP7BP35670 1465 aa9.64□□□□□ -0.87
NECAP1-224ENST00000640099 MAP2P11137 1827 aaKnown RBP9.64□□□□□ -0.87
NECAP1-224ENST00000640099 NGDNQ8NEJ9 315 aaKnown RBP9.64□□□□□ -0.87
NECAP1-224ENST00000640099 ZBTB7CA1YPR0 619 aa9.63□□□□□ -0.87
NECAP1-224ENST00000640099 SIRT2Q8IXJ6 389 aa9.63□□□□□ -0.87
NECAP1-224ENST00000640099 CFAP44Q96MT7 982 aa9.63□□□□□ -0.87
NECAP1-224ENST00000640099 NUCB1Q02818 461 aa9.63□□□□□ -0.87
NECAP1-224ENST00000640099 CALD1Q05682 793 aaKnown RBP9.63□□□□□ -0.87
NECAP1-224ENST00000640099 AMOTL2Q9Y2J4 779 aa9.63□□□□□ -0.87
NECAP1-224ENST00000640099 SPATA31D1Q6ZQQ2 1576 aa9.62□□□□□ -0.87
NECAP1-224ENST00000640099 TMEM2Q9UHN6 1383 aa9.62□□□□□ -0.87
NECAP1-224ENST00000640099 SLC4A10Q6U841 1118 aa9.62□□□□□ -0.87
NECAP1-224ENST00000640099 ZNF692Q9BU19 519 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-224ENST00000640099 GZF1Q9H116 711 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-224ENST00000640099 KIF20BQ96Q89 1820 aa9.62□□□□□ -0.87
NECAP1-224ENST00000640099 ZNF853P0CG23 659 aa9.62□□□□□ -0.87
NECAP1-224ENST00000640099 C16orf71Q8IYS4 520 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-224ENST00000640099 LMOD3Q0VAK6 560 aa9.61□□□□□ -0.87
NECAP1-224ENST00000640099 SMARCA5O60264 1052 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-224ENST00000640099 AMPHP49418 695 aa9.61□□□□□ -0.87
NECAP1-224ENST00000640099 EID1Q9Y6B2 187 aa9.61□□□□□ -0.87
NECAP1-224ENST00000640099 AGLP35573 1532 aa9.61□□□□□ -0.87
NECAP1-224ENST00000640099 F6X3S4 739 aa9.6□□□□□ -0.87
NECAP1-224ENST00000640099 ANKRD26Q9UPS8 1709 aa9.6□□□□□ -0.87
NECAP1-224ENST00000640099 DLC1Q96QB1 1528 aa9.6□□□□□ -0.87
NECAP1-224ENST00000640099 RBM42Q9BTD8 480 aaKnown RBP9.6□□□□□ -0.87
NECAP1-224ENST00000640099 NRXN3Q9Y4C0 1643 aa9.6□□□□□ -0.87
NECAP1-224ENST00000640099 OTUD7AQ8TE49 926 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-224ENST00000640099 MAP3K19Q56UN5 1328 aa9.59□□□□□ -0.87
NECAP1-224ENST00000640099 SLC4A2P04920 1241 aa9.59□□□□□ -0.87
NECAP1-224ENST00000640099 NLRP6P59044 892 aa9.59□□□□□ -0.87
NECAP1-224ENST00000640099 MTHFSDQ2M296 383 aaKnown RBP9.59□□□□□ -0.87
NECAP1-224ENST00000640099 USHBP1Q8N6Y0 703 aa9.59□□□□□ -0.87
NECAP1-224ENST00000640099 API5Q9BZZ5 524 aaKnown RBP9.59□□□□□ -0.87
NECAP1-224ENST00000640099 ANTXR1Q9H6X2 564 aa9.59□□□□□ -0.87
NECAP1-224ENST00000640099 CDK12Q9NYV4 1490 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-224ENST00000640099 AATKQ6ZMQ8 1374 aa9.58□□□□□ -0.88
NECAP1-224ENST00000640099 ADAMTS13Q76LX8 1427 aa9.58□□□□□ -0.88
NECAP1-224ENST00000640099 G2E3Q7L622 706 aa9.58□□□□□ -0.88
NECAP1-224ENST00000640099 HSCBQ8IWL3 235 aa9.58□□□□□ -0.88
NECAP1-224ENST00000640099 MEIS3Q99687 375 aa9.58□□□□□ -0.88
NECAP1-224ENST00000640099 ABCC4O15439 1325 aa9.58□□□□□ -0.88
NECAP1-224ENST00000640099 RTF1Q92541 710 aaKnown RBP9.58□□□□□ -0.88
NECAP1-224ENST00000640099 TSPYL4Q9UJ04 414 aa9.58□□□□□ -0.88
NECAP1-224ENST00000640099 TBC1D9Q6ZT07 1266 aa9.57□□□□□ -0.88
NECAP1-224ENST00000640099 PTPRUQ92729 1446 aa9.57□□□□□ -0.88
NECAP1-224ENST00000640099 SETD1AO15047 1707 aaKnown RBP9.57□□□□□ -0.88
NECAP1-224ENST00000640099 CDC42BPGQ6DT37 1551 aa9.57□□□□□ -0.88
NECAP1-224ENST00000640099 ARHGAP45Q92619 1136 aa9.57□□□□□ -0.88
NECAP1-224ENST00000640099 ZNF428Q96B54 188 aa9.57□□□□□ -0.88
NECAP1-224ENST00000640099 CD2BP2O95400 341 aaKnown RBP9.56□□□□□ -0.88
NECAP1-224ENST00000640099 HSP90AA1P07900 732 aaKnown RBP9.56□□□□□ -0.88
NECAP1-224ENST00000640099 TRHP20396 242 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-224ENST00000640099 GCC1Q96CN9 775 aa9.56□□□□□ -0.88
NECAP1-224ENST00000640099 EYA1Q99502 592 aa9.56□□□□□ -0.88
NECAP1-224ENST00000640099 HSP90AB1P08238 724 aaKnown RBP9.56□□□□□ -0.88
NECAP1-224ENST00000640099 TSHZ3Q63HK5 1081 aa9.56□□□□□ -0.88
NECAP1-224ENST00000640099 PLEKHG3A1L390 1219 aa9.56□□□□□ -0.88
NECAP1-224ENST00000640099 CHL1O00533 1208 aa9.56□□□□□ -0.88
NECAP1-224ENST00000640099 KCNA6P17658 529 aa9.56□□□□□ -0.88
NECAP1-224ENST00000640099 GSPT1P15170 499 aaKnown RBP9.55□□□□□ -0.88
NECAP1-224ENST00000640099 USP6P35125 1406 aa9.55□□□□□ -0.88
NECAP1-224ENST00000640099 PTCH1Q13635 1447 aa9.55□□□□□ -0.88
NECAP1-224ENST00000640099 BRPF1P55201 1214 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-224ENST00000640099 BMP2KLQ5H9B9 411 aa9.55□□□□□ -0.88
NECAP1-224ENST00000640099 VIRMAQ69YN4 1812 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms