RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
HNRNPU-224ENST00000640056 FNBP4Q8N3X1 1017 aaPredicted RBP12.83□□□□□ -0.36
HNRNPU-224ENST00000640056 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
HNRNPU-224ENST00000640056 SBNO1A3KN83 1393 aa12.83□□□□□ -0.36
HNRNPU-224ENST00000640056 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.36
HNRNPU-224ENST00000640056 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
HNRNPU-224ENST00000640056 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
HNRNPU-224ENST00000640056 BECN1Q14457 450 aa12.83□□□□□ -0.36
HNRNPU-224ENST00000640056 FAM43AQ8N2R8 423 aa12.83□□□□□ -0.36
HNRNPU-224ENST00000640056 KRT28Q7Z3Y7 464 aa12.82□□□□□ -0.36
HNRNPU-224ENST00000640056 ADAMTS2O95450 1211 aa12.81□□□□□ -0.36
HNRNPU-224ENST00000640056 CLUAP1Q96AJ1 413 aa12.81□□□□□ -0.36
HNRNPU-224ENST00000640056 QTRT2Q9H974 415 aaKnown RBP12.81□□□□□ -0.36
HNRNPU-224ENST00000640056 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
HNRNPU-224ENST00000640056 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
HNRNPU-224ENST00000640056 TNS3Q68CZ2 1445 aa12.81□□□□□ -0.36
HNRNPU-224ENST00000640056 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
HNRNPU-224ENST00000640056 AAMPQ13685 434 aa12.8□□□□□ -0.36
HNRNPU-224ENST00000640056 SAFB2Q14151 953 aaKnown RBP eCLIP12.8□□□□□ -0.36
HNRNPU-224ENST00000640056 USP21Q9UK80 565 aa12.8□□□□□ -0.36
HNRNPU-224ENST00000640056 SEC24BO95487 1268 aa12.79□□□□□ -0.36
HNRNPU-224ENST00000640056 TULP4Q9NRJ4 1543 aa12.79□□□□□ -0.36
HNRNPU-224ENST00000640056 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
HNRNPU-224ENST00000640056 XPCQ01831 940 aaPredicted RBP12.78□□□□□ -0.36
HNRNPU-224ENST00000640056 ZNF784Q8NCA9 323 aaPredicted RBP12.78□□□□□ -0.36
HNRNPU-224ENST00000640056 KIAA1210Q9ULL0 1709 aa12.78□□□□□ -0.36
HNRNPU-224ENST00000640056 WWC1Q8IX03 1113 aa12.78□□□□□ -0.36
HNRNPU-224ENST00000640056 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
HNRNPU-224ENST00000640056 MINK1Q8N4C8 1332 aaPredicted RBP12.77□□□□□ -0.36
HNRNPU-224ENST00000640056 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
HNRNPU-224ENST00000640056 CANXP27824 592 aaKnown RBP12.77□□□□□ -0.37
HNRNPU-224ENST00000640056 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.37
HNRNPU-224ENST00000640056 RSPH6AQ9H0K4 717 aa12.77□□□□□ -0.37
HNRNPU-224ENST00000640056 ATRNO75882 1429 aa12.77□□□□□ -0.37
HNRNPU-224ENST00000640056 VIRMAQ69YN4 1812 aaKnown RBP12.77□□□□□ -0.37
HNRNPU-224ENST00000640056 MYOM1P52179 1685 aa12.76□□□□□ -0.37
HNRNPU-224ENST00000640056 PANK1Q8TE04 598 aa12.76□□□□□ -0.37
HNRNPU-224ENST00000640056 POLR3AO14802 1390 aaPredicted RBP12.76□□□□□ -0.37
HNRNPU-224ENST00000640056 L1TD1Q5T7N2 865 aaKnown RBP12.75□□□□□ -0.37
HNRNPU-224ENST00000640056 CARD14Q9BXL6 1004 aa12.75□□□□□ -0.37
HNRNPU-224ENST00000640056 ANTXR1Q9H6X2 564 aa12.75□□□□□ -0.37
HNRNPU-224ENST00000640056 UPF2Q9HAU5 1272 aaKnown RBP12.75□□□□□ -0.37
HNRNPU-224ENST00000640056 PRR36Q9H6K5 1346 aa12.74□□□□□ -0.37
HNRNPU-224ENST00000640056 BCL9LQ86UU0 1499 aa12.74□□□□□ -0.37
HNRNPU-224ENST00000640056 USP32Q8NFA0 1604 aa12.74□□□□□ -0.37
HNRNPU-224ENST00000640056 HAP1P54257 671 aaPredicted RBP12.74□□□□□ -0.37
HNRNPU-224ENST00000640056 SLIT2O94813 1529 aa12.73□□□□□ -0.37
HNRNPU-224ENST00000640056 RARSP54136 660 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-224ENST00000640056 UNC5CLQ8IV45 518 aa12.73□□□□□ -0.37
HNRNPU-224ENST00000640056 NGDNQ8NEJ9 315 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-224ENST00000640056 TBC1D32Q96NH3 1257 aa12.73□□□□□ -0.37
HNRNPU-224ENST00000640056 SLKQ9H2G2 1235 aaPredicted RBP12.73□□□□□ -0.37
HNRNPU-224ENST00000640056 NUDT16Q96DE0 195 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-224ENST00000640056 ATP7BP35670 1465 aa12.72□□□□□ -0.37
HNRNPU-224ENST00000640056 ARHGEF28Q8N1W1 1705 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-224ENST00000640056 EIF5BO60841 1220 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-224ENST00000640056 CCDC61Q9Y6R9 512 aa12.72□□□□□ -0.37
HNRNPU-224ENST00000640056 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
HNRNPU-224ENST00000640056 CDK19Q9BWU1 502 aa12.71□□□□□ -0.37
HNRNPU-224ENST00000640056 PCDHB15Q9Y5E8 787 aa12.71□□□□□ -0.37
HNRNPU-224ENST00000640056 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.38
HNRNPU-224ENST00000640056 WDR63Q8IWG1 891 aa12.71□□□□□ -0.38
HNRNPU-224ENST00000640056 UBE2Q2Q8WVN8 375 aa12.71□□□□□ -0.38
HNRNPU-224ENST00000640056 RUNDC1Q96C34 613 aa12.71□□□□□ -0.38
HNRNPU-224ENST00000640056 TBC1D2Q9BYX2 928 aa12.71□□□□□ -0.38
HNRNPU-224ENST00000640056 RWDD1Q9H446 243 aaPredicted RBP12.71□□□□□ -0.38
HNRNPU-224ENST00000640056 LMOD2Q6P5Q4 547 aa12.7□□□□□ -0.38
HNRNPU-224ENST00000640056 PDZRN3Q9UPQ7 1066 aa12.7□□□□□ -0.38
HNRNPU-224ENST00000640056 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.69□□□□□ -0.38
HNRNPU-224ENST00000640056 VPS72Q15906 364 aa12.69□□□□□ -0.38
HNRNPU-224ENST00000640056 MARF1Q9Y4F3 1742 aaKnown RBP12.69□□□□□ -0.38
HNRNPU-224ENST00000640056 RLBP1P12271 317 aa12.68□□□□□ -0.38
HNRNPU-224ENST00000640056 CCDC27Q2M243 656 aa12.68□□□□□ -0.38
HNRNPU-224ENST00000640056 TCP11L2Q8N4U5 519 aa12.68□□□□□ -0.38
HNRNPU-224ENST00000640056 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
HNRNPU-224ENST00000640056 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
HNRNPU-224ENST00000640056 ITSN1Q15811 1721 aa12.67□□□□□ -0.38
HNRNPU-224ENST00000640056 TRPM3Q9HCF6 1732 aaPredicted RBP12.67□□□□□ -0.38
HNRNPU-224ENST00000640056 SBNO2Q9Y2G9 1366 aa12.67□□□□□ -0.38
HNRNPU-224ENST00000640056 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
HNRNPU-224ENST00000640056 CABLES1Q8TDN4 633 aa12.67□□□□□ -0.38
HNRNPU-224ENST00000640056 RGPD8O14715 1765 aaPredicted RBP12.66□□□□□ -0.38
HNRNPU-224ENST00000640056 ACEP12821 1306 aa12.66□□□□□ -0.38
HNRNPU-224ENST00000640056 PSDA5PKW4 1024 aaPredicted RBP12.66□□□□□ -0.38
HNRNPU-224ENST00000640056 SRPK2P78362 688 aaKnown RBP12.66□□□□□ -0.38
HNRNPU-224ENST00000640056 RRAGDQ9NQL2 400 aaPredicted RBP12.66□□□□□ -0.38
HNRNPU-224ENST00000640056 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
HNRNPU-224ENST00000640056 ALS2Q96Q42 1657 aa12.65□□□□□ -0.38
HNRNPU-224ENST00000640056 FSD2A1L4K1 749 aa12.65□□□□□ -0.38
HNRNPU-224ENST00000640056 GOLGA6L3A6NEY3 463 aa12.65□□□□□ -0.38
HNRNPU-224ENST00000640056 ONECUT3O60422 494 aaPredicted RBP12.65□□□□□ -0.38
HNRNPU-224ENST00000640056 MCM4P33991 863 aa12.65□□□□□ -0.38
HNRNPU-224ENST00000640056 EVC2Q86UK5 1308 aa12.64□□□□□ -0.39
HNRNPU-224ENST00000640056 FAM83GA6ND36 823 aa12.64□□□□□ -0.39
HNRNPU-224ENST00000640056 MYH16Q9H6N6 1097 aa12.64□□□□□ -0.39
HNRNPU-224ENST00000640056 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
HNRNPU-224ENST00000640056 NWD2Q9ULI1 1742 aa12.64□□□□□ -0.39
HNRNPU-224ENST00000640056 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
HNRNPU-224ENST00000640056 XRCC6P12956 609 aaKnown RBP eCLIP12.64□□□□□ -0.393e-19■□□□□ 9.8
HNRNPU-224ENST00000640056 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms