RNA–Protein interactions for RNA: ENST00000640028.1

CACNA1H-212, Transcript of calcium voltage-gated channel subunit alpha1 H, humanhuman

TSL 5

Gene CACNA1H, Length 7,375 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1H-212ENST00000640028 ESPNB1AK53 854 aa23.39■■□□□ 1.34
CACNA1H-212ENST00000640028 RRP9O43818 475 aaKnown RBP23.39■■□□□ 1.33
CACNA1H-212ENST00000640028 XPCQ01831 940 aaPredicted RBP23.39■■□□□ 1.33
CACNA1H-212ENST00000640028 INCENPQ9NQS7 918 aa23.39■■□□□ 1.33
CACNA1H-212ENST00000640028 NOB1Q9ULX3 412 aaKnown RBP23.39■■□□□ 1.33
CACNA1H-212ENST00000640028 TRMT1Q9NXH9 659 aaKnown RBP23.38■■□□□ 1.33
CACNA1H-212ENST00000640028 TBC1D2BQ9UPU7 963 aa23.38■■□□□ 1.33
CACNA1H-212ENST00000640028 ERLIN1O75477 346 aa23.38■■□□□ 1.33
CACNA1H-212ENST00000640028 ADAMTS8Q9UP79 889 aa23.37■■□□□ 1.33
CACNA1H-212ENST00000640028 LARP1BQ659C4 914 aaKnown RBP23.37■■□□□ 1.33
CACNA1H-212ENST00000640028 RAI14Q9P0K7 980 aa23.36■■□□□ 1.33
CACNA1H-212ENST00000640028 TTC39AQ5SRH9 613 aa23.36■■□□□ 1.33
CACNA1H-212ENST00000640028 TSR2Q969E8 191 aaKnown RBP23.36■■□□□ 1.33
CACNA1H-212ENST00000640028 DDX11Q96FC9 970 aa23.36■■□□□ 1.33
CACNA1H-212ENST00000640028 CEP63Q96MT8 703 aa23.35■■□□□ 1.33
CACNA1H-212ENST00000640028 RBM42Q9BTD8 480 aaKnown RBP23.35■■□□□ 1.33
CACNA1H-212ENST00000640028 CNNM1Q9NRU3 951 aa23.35■■□□□ 1.33
CACNA1H-212ENST00000640028 NLRP2Q9NX02 1062 aa23.35■■□□□ 1.33
CACNA1H-212ENST00000640028 KAT6BQ8WYB5 2073 aa23.35■■□□□ 1.33
CACNA1H-212ENST00000640028 CCDC144AA2RUR9 1427 aa23.35■■□□□ 1.33
CACNA1H-212ENST00000640028 GTF2F1P35269 517 aaKnown RBP eCLIP23.35■■□□□ 1.33
CACNA1H-212ENST00000640028 DHX8Q14562 1220 aaKnown RBP23.34■■□□□ 1.33
CACNA1H-212ENST00000640028 DDX54Q8TDD1 881 aaKnown RBP23.34■■□□□ 1.33
CACNA1H-212ENST00000640028 K7ELQ4 463 aaPredicted RBP23.33■■□□□ 1.33
CACNA1H-212ENST00000640028 UBXN4Q92575 508 aa23.33■■□□□ 1.33
CACNA1H-212ENST00000640028 SPATA32Q96LK8 384 aa23.33■■□□□ 1.33
CACNA1H-212ENST00000640028 RAPGEF4Q8WZA2 1011 aa23.33■■□□□ 1.32
CACNA1H-212ENST00000640028 CABP2Q9NPB3 220 aa23.33■■□□□ 1.32
CACNA1H-212ENST00000640028 MYCNP04198 464 aaPredicted RBP23.32■■□□□ 1.32
CACNA1H-212ENST00000640028 USP5P45974 858 aa23.32■■□□□ 1.32
CACNA1H-212ENST00000640028 CFAP100Q494V2 611 aa23.32■■□□□ 1.32
CACNA1H-212ENST00000640028 KLHL10Q6JEL2 608 aa23.32■■□□□ 1.32
CACNA1H-212ENST00000640028 STIM1Q13586 685 aa23.31■■□□□ 1.32
CACNA1H-212ENST00000640028 CWC27Q6UX04 472 aaKnown RBP23.31■■□□□ 1.32
CACNA1H-212ENST00000640028 LARP6Q9BRS8 491 aaKnown RBP23.31■■□□□ 1.32
CACNA1H-212ENST00000640028 USP8P40818 1118 aa23.31■■□□□ 1.32
CACNA1H-212ENST00000640028 EFCAB2Q5VUJ9 269 aa23.31■■□□□ 1.32
CACNA1H-212ENST00000640028 EPB41L2O43491 1005 aaKnown RBP23.31■■□□□ 1.32
CACNA1H-212ENST00000640028 ANAPC15P60006 121 aa23.31■■□□□ 1.32
CACNA1H-212ENST00000640028 CYP46A1Q9Y6A2 500 aa23.31■■□□□ 1.32
CACNA1H-212ENST00000640028 SF3B2Q13435 895 aaKnown RBP23.31■■□□□ 1.32
CACNA1H-212ENST00000640028 TRMT1LQ7Z2T5 733 aaKnown RBP23.3■■□□□ 1.32
CACNA1H-212ENST00000640028 CASQ1P31415 396 aa23.3■■□□□ 1.32
CACNA1H-212ENST00000640028 URI1O94763 535 aaPredicted RBP23.3■■□□□ 1.32
CACNA1H-212ENST00000640028 FKBP4Q02790 459 aaKnown RBP eCLIP23.3■■□□□ 1.322e-6■■■■■ 31.2
CACNA1H-212ENST00000640028 CRACR2AQ9BSW2 395 aa23.3■■□□□ 1.32
CACNA1H-212ENST00000640028 CCDC69A6NI79 296 aa23.3■■□□□ 1.32
CACNA1H-212ENST00000640028 MACROD2A1Z1Q3 448 aa23.3■■□□□ 1.32
CACNA1H-212ENST00000640028 MPHOSPH10O00566 681 aaKnown RBP23.3■■□□□ 1.32
CACNA1H-212ENST00000640028 UPF3BQ9BZI7 483 aaKnown RBP23.3■■□□□ 1.32
CACNA1H-212ENST00000640028 EIF5P55010 431 aaKnown RBP23.29■■□□□ 1.32
CACNA1H-212ENST00000640028 ATP2C2O75185 946 aa23.29■■□□□ 1.32
CACNA1H-212ENST00000640028 GNAI1P63096 354 aa23.29■■□□□ 1.32
CACNA1H-212ENST00000640028 PDCP20941 246 aa23.29■■□□□ 1.32
CACNA1H-212ENST00000640028 KRT85P78386 507 aa23.29■■□□□ 1.32
CACNA1H-212ENST00000640028 SLC3A2P08195 630 aaKnown RBP23.28■■□□□ 1.32
CACNA1H-212ENST00000640028 EXOSC9Q06265 439 aaKnown RBP23.28■■□□□ 1.32
CACNA1H-212ENST00000640028 RABEP1Q15276 862 aa23.28■■□□□ 1.32
CACNA1H-212ENST00000640028 ZSCAN29Q8IWY8 852 aaPredicted RBP23.28■■□□□ 1.32
CACNA1H-212ENST00000640028 CTNNBL1Q8WYA6 563 aaPredicted RBP23.28■■□□□ 1.32
CACNA1H-212ENST00000640028 LUC7LQ9NQ29 371 aaKnown RBP23.28■■□□□ 1.32
CACNA1H-212ENST00000640028 NUP62CLQ9H1M0 184 aa23.28■■□□□ 1.32
CACNA1H-212ENST00000640028 PPP4R3BQ5MIZ7 849 aa23.28■■□□□ 1.32
CACNA1H-212ENST00000640028 DHX57Q6P158 1386 aaKnown RBP23.28■■□□□ 1.32
CACNA1H-212ENST00000640028 CCDC178Q5BJE1 867 aa23.27■■□□□ 1.32
CACNA1H-212ENST00000640028 FERMT3Q86UX7 667 aa23.27■■□□□ 1.32
CACNA1H-212ENST00000640028 C16orf45Q96MC5 204 aaPredicted RBP23.27■■□□□ 1.32
CACNA1H-212ENST00000640028 SHTN1A0MZ66 631 aa23.27■■□□□ 1.32
CACNA1H-212ENST00000640028 ARHGAP29Q52LW3 1261 aa23.27■■□□□ 1.32
CACNA1H-212ENST00000640028 MYL6BP14649 208 aa23.27■■□□□ 1.32
CACNA1H-212ENST00000640028 GUCY1B3Q02153 619 aa23.26■■□□□ 1.31
CACNA1H-212ENST00000640028 CCDC85AQ96PX6 553 aaPredicted RBP23.26■■□□□ 1.31
CACNA1H-212ENST00000640028 FAM107BQ9H098 131 aa23.26■■□□□ 1.31
CACNA1H-212ENST00000640028 CPLX3Q8WVH0 158 aa23.26■■□□□ 1.31
CACNA1H-212ENST00000640028 STRN4Q9NRL3 753 aa23.26■■□□□ 1.31
CACNA1H-212ENST00000640028 JAKMIP1Q96N16 626 aaKnown RBP23.25■■□□□ 1.31
CACNA1H-212ENST00000640028 ZNF76P36508 570 aa23.25■■□□□ 1.31
CACNA1H-212ENST00000640028 PTPN14Q15678 1187 aa23.25■■□□□ 1.31
CACNA1H-212ENST00000640028 PIP4K2BP78356 416 aa23.25■■□□□ 1.31
CACNA1H-212ENST00000640028 ISM2Q6H9L7 571 aa23.25■■□□□ 1.31
CACNA1H-212ENST00000640028 CARMIL2Q6F5E8 1435 aa23.25■■□□□ 1.31
CACNA1H-212ENST00000640028 KIF6Q6ZMV9 814 aa23.25■■□□□ 1.31
CACNA1H-212ENST00000640028 KIF7Q2M1P5 1343 aa23.24■■□□□ 1.31
CACNA1H-212ENST00000640028 TMCO5BA8MYB1 307 aa23.24■■□□□ 1.31
CACNA1H-212ENST00000640028 MTHFSP49914 203 aa23.24■■□□□ 1.31
CACNA1H-212ENST00000640028 MCM4P33991 863 aa23.24■■□□□ 1.31
CACNA1H-212ENST00000640028 WDR33Q9C0J8 1336 aaKnown RBP23.24■■□□□ 1.31
CACNA1H-212ENST00000640028 CCDC91Q7Z6B0 441 aa23.24■■□□□ 1.31
CACNA1H-212ENST00000640028 ZSWIM4Q9H7M6 989 aa23.24■■□□□ 1.31
CACNA1H-212ENST00000640028 CCDC148Q8NFR7 591 aa23.23■■□□□ 1.31
CACNA1H-212ENST00000640028 FHOD3Q2V2M9 1422 aa23.23■■□□□ 1.31
CACNA1H-212ENST00000640028 SMC1AQ14683 1233 aaKnown RBP23.23■■□□□ 1.31
CACNA1H-212ENST00000640028 GSTTP1A0A1W2PQM5 241 aa23.23■■□□□ 1.31
CACNA1H-212ENST00000640028 CBFA2T2O43439 604 aa23.22■■□□□ 1.31
CACNA1H-212ENST00000640028 IFFO1Q0D2I5 559 aa23.22■■□□□ 1.31
CACNA1H-212ENST00000640028 SLC26A8Q96RN1 970 aa23.22■■□□□ 1.31
CACNA1H-212ENST00000640028 DACH1Q9UI36 760 aa23.22■■□□□ 1.31
CACNA1H-212ENST00000640028 TMEM132EQ6IEE7 984 aa23.22■■□□□ 1.31
CACNA1H-212ENST00000640028 TAF4BQ92750 862 aa23.22■■□□□ 1.31
CACNA1H-212ENST00000640028 SOGA3Q5TF21 947 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms