RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 FMN1Q68DA7 1419 aa10.25□□□□□ -0.77
NECAP1-220ENST00000639841 SCNN1AP37088 669 aa10.25□□□□□ -0.77
NECAP1-220ENST00000639841 FOSBP53539 338 aa10.25□□□□□ -0.77
NECAP1-220ENST00000639841 IRX6P78412 446 aaPredicted RBP10.25□□□□□ -0.77
NECAP1-220ENST00000639841 MICALL2Q8IY33 904 aa10.25□□□□□ -0.77
NECAP1-220ENST00000639841 BIN2Q9UBW5 565 aaPredicted RBP10.25□□□□□ -0.77
NECAP1-220ENST00000639841 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.25□□□□□ -0.77
NECAP1-220ENST00000639841 ZNF518AQ6AHZ1 1483 aa10.25□□□□□ -0.77
NECAP1-220ENST00000639841 OATP04181 439 aa10.25□□□□□ -0.77
NECAP1-220ENST00000639841 CABLES1Q8TDN4 633 aa10.25□□□□□ -0.77
NECAP1-220ENST00000639841 EVI5O60447 810 aa10.24□□□□□ -0.77
NECAP1-220ENST00000639841 HDLBPQ00341 1268 aaKnown RBP10.24□□□□□ -0.77
NECAP1-220ENST00000639841 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
NECAP1-220ENST00000639841 CERKQ8TCT0 537 aa10.24□□□□□ -0.77
NECAP1-220ENST00000639841 KIF14Q15058 1648 aa10.24□□□□□ -0.77
NECAP1-220ENST00000639841 SETD1BQ9UPS6 1966 aaKnown RBP10.24□□□□□ -0.77
NECAP1-220ENST00000639841 POTEIP0CG38 1075 aa10.23□□□□□ -0.77
NECAP1-220ENST00000639841 NDUFV2P19404 249 aa10.23□□□□□ -0.77
NECAP1-220ENST00000639841 C9orf131Q5VYM1 1079 aa10.23□□□□□ -0.77
NECAP1-220ENST00000639841 PIK3R5Q8WYR1 880 aa10.23□□□□□ -0.77
NECAP1-220ENST00000639841 ADGRG1Q9Y653 693 aa10.23□□□□□ -0.77
NECAP1-220ENST00000639841 CLIP1P30622 1438 aa10.23□□□□□ -0.77
NECAP1-220ENST00000639841 YEATS2Q9ULM3 1422 aa10.23□□□□□ -0.77
NECAP1-220ENST00000639841 EFCAB2Q5VUJ9 269 aa10.23□□□□□ -0.77
NECAP1-220ENST00000639841 BACH2Q9BYV9 841 aa10.23□□□□□ -0.77
NECAP1-220ENST00000639841 RAD51AP2Q09MP3 1159 aa10.22□□□□□ -0.77
NECAP1-220ENST00000639841 DPY19L2Q6NUT2 758 aa10.22□□□□□ -0.77
NECAP1-220ENST00000639841 TMEM106CQ9BVX2 250 aa10.22□□□□□ -0.77
NECAP1-220ENST00000639841 UHRF1BP1Q6BDS2 1440 aa10.22□□□□□ -0.77
NECAP1-220ENST00000639841 SCAPERQ9BY12 1400 aa10.22□□□□□ -0.77
NECAP1-220ENST00000639841 KDM5CP41229 1560 aa10.22□□□□□ -0.77
NECAP1-220ENST00000639841 SOX11P35716 441 aa10.21□□□□□ -0.77
NECAP1-220ENST00000639841 TMA7Q9Y2S6 64 aaKnown RBP10.21□□□□□ -0.77
NECAP1-220ENST00000639841 PTPRTO14522 1441 aa10.21□□□□□ -0.77
NECAP1-220ENST00000639841 TLDC2A0PJX2 215 aa10.21□□□□□ -0.78
NECAP1-220ENST00000639841 AGLP35573 1532 aa10.21□□□□□ -0.78
NECAP1-220ENST00000639841 EGFLAMQ63HQ2 1017 aa10.21□□□□□ -0.78
NECAP1-220ENST00000639841 CNTLNQ9NXG0 1405 aa10.21□□□□□ -0.78
NECAP1-220ENST00000639841 CUEDC1Q9NWM3 386 aaPredicted RBP10.2□□□□□ -0.78
NECAP1-220ENST00000639841 RBM27Q9P2N5 1060 aaKnown RBP10.2□□□□□ -0.78
NECAP1-220ENST00000639841 MAP3K7O43318 606 aa10.19□□□□□ -0.78
NECAP1-220ENST00000639841 LDLRAD1Q5T700 205 aa10.19□□□□□ -0.78
NECAP1-220ENST00000639841 TANGO6Q9C0B7 1094 aa10.19□□□□□ -0.78
NECAP1-220ENST00000639841 CD46P15529 392 aa10.19□□□□□ -0.78
NECAP1-220ENST00000639841 GJA5P36382 358 aa10.19□□□□□ -0.78
NECAP1-220ENST00000639841 CTDSPL2Q05D32 466 aa10.19□□□□□ -0.78
NECAP1-220ENST00000639841 NUTM2BA6NNL0 878 aaPredicted RBP10.18□□□□□ -0.78
NECAP1-220ENST00000639841 NUTM2EB1AL46 878 aaPredicted RBP10.18□□□□□ -0.78
NECAP1-220ENST00000639841 TPD52L2O43399 206 aaKnown RBP10.18□□□□□ -0.78
NECAP1-220ENST00000639841 PRKAR2AP13861 404 aaKnown RBP10.18□□□□□ -0.78
NECAP1-220ENST00000639841 SEMA3FQ13275 785 aa10.18□□□□□ -0.78
NECAP1-220ENST00000639841 NUTM2DQ5VT03 806 aaPredicted RBP10.18□□□□□ -0.78
NECAP1-220ENST00000639841 NUTM2AQ8IVF1 878 aaPredicted RBP10.18□□□□□ -0.78
NECAP1-220ENST00000639841 EPS8L1Q8TE68 723 aa10.18□□□□□ -0.78
NECAP1-220ENST00000639841 KLHL42Q9P2K6 505 aa10.18□□□□□ -0.78
NECAP1-220ENST00000639841 MLH3Q9UHC1 1453 aa10.18□□□□□ -0.78
NECAP1-220ENST00000639841 TROQ12816 1431 aaPredicted RBP10.18□□□□□ -0.78
NECAP1-220ENST00000639841 DHX38Q92620 1227 aaKnown RBP10.17□□□□□ -0.78
NECAP1-220ENST00000639841 CLP1Q92989 425 aaKnown RBP10.17□□□□□ -0.78
NECAP1-220ENST00000639841 TINF2Q9BSI4 451 aa10.17□□□□□ -0.78
NECAP1-220ENST00000639841 VTI1AQ96AJ9 217 aa10.17□□□□□ -0.78
NECAP1-220ENST00000639841 CCDC18Q5T9S5 1454 aa10.17□□□□□ -0.78
NECAP1-220ENST00000639841 MROH2AA6NES4 1674 aa10.17□□□□□ -0.78
NECAP1-220ENST00000639841 ARHGAP5Q13017 1502 aa10.16□□□□□ -0.78
NECAP1-220ENST00000639841 PIK3CDO00329 1044 aa10.16□□□□□ -0.78
NECAP1-220ENST00000639841 MRPL58Q14197 206 aaKnown RBP10.16□□□□□ -0.78
NECAP1-220ENST00000639841 CCDC144BQ3MJ40 725 aa10.16□□□□□ -0.78
NECAP1-220ENST00000639841 PADI6Q6TGC4 694 aa10.16□□□□□ -0.78
NECAP1-220ENST00000639841 TBX22Q9Y458 520 aa10.16□□□□□ -0.78
NECAP1-220ENST00000639841 SIGLEC1Q9BZZ2 1709 aa10.16□□□□□ -0.78
NECAP1-220ENST00000639841 SDE2Q6IQ49 451 aa10.15□□□□□ -0.78
NECAP1-220ENST00000639841 NLGN1Q8N2Q7 840 aa10.15□□□□□ -0.78
NECAP1-220ENST00000639841 SPACA7Q96KW9 195 aa10.15□□□□□ -0.78
NECAP1-220ENST00000639841 ESF1Q9H501 851 aaKnown RBP10.15□□□□□ -0.78
NECAP1-220ENST00000639841 PIF1Q9H611 641 aa10.15□□□□□ -0.78
NECAP1-220ENST00000639841 MYH16Q9H6N6 1097 aa10.15□□□□□ -0.78
NECAP1-220ENST00000639841 DIP2CQ9Y2E4 1556 aa10.15□□□□□ -0.78
NECAP1-220ENST00000639841 CDK13Q14004 1512 aaKnown RBP10.15□□□□□ -0.78
NECAP1-220ENST00000639841 NPATQ14207 1427 aa10.15□□□□□ -0.78
NECAP1-220ENST00000639841 CRTC2Q53ET0 693 aaPredicted RBP10.15□□□□□ -0.78
NECAP1-220ENST00000639841 LRRN4Q8WUT4 740 aa10.15□□□□□ -0.78
NECAP1-220ENST00000639841 RBM33Q96EV2 1170 aaKnown RBP10.15□□□□□ -0.78
NECAP1-220ENST00000639841 TRPC6Q9Y210 931 aa10.15□□□□□ -0.78
NECAP1-220ENST00000639841 PREX2Q70Z35 1606 aa10.15□□□□□ -0.79
NECAP1-220ENST00000639841 SCAMP3O14828 347 aaKnown RBP10.14□□□□□ -0.79
NECAP1-220ENST00000639841 HSPA2P54652 639 aa10.14□□□□□ -0.79
NECAP1-220ENST00000639841 PRPF38BQ5VTL8 546 aaKnown RBP10.14□□□□□ -0.79
NECAP1-220ENST00000639841 STRCQ7RTU9 1775 aa10.14□□□□□ -0.79
NECAP1-220ENST00000639841 PPP1R3GB7ZBB8 358 aa10.14□□□□□ -0.79
NECAP1-220ENST00000639841 ATP2B4P23634 1241 aa10.14□□□□□ -0.79
NECAP1-220ENST00000639841 NUTM1Q86Y26 1132 aa10.14□□□□□ -0.79
NECAP1-220ENST00000639841 EXOC8Q8IYI6 725 aa10.14□□□□□ -0.79
NECAP1-220ENST00000639841 SPATA31D1Q6ZQQ2 1576 aa10.13□□□□□ -0.79
NECAP1-220ENST00000639841 TRAPPC8Q9Y2L5 1435 aa10.13□□□□□ -0.79
NECAP1-220ENST00000639841 PRKAG2Q9UGJ0 569 aa10.13□□□□□ -0.79
NECAP1-220ENST00000639841 C3P01024 1663 aa10.13□□□□□ -0.79
NECAP1-220ENST00000639841 ITSN2Q9NZM3 1697 aa10.13□□□□□ -0.79
NECAP1-220ENST00000639841 ABCC1P33527 1531 aa10.13□□□□□ -0.79
NECAP1-220ENST00000639841 FAM196BA6NMK8 535 aa10.12□□□□□ -0.79
NECAP1-220ENST00000639841 USP17L15C9J2P7 530 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms