RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
SCN8A-215ENST00000638820 C1orf167Q5SNV9 1468 aa17.22■□□□□ 0.35
SCN8A-215ENST00000638820 CALD1Q05682 793 aaKnown RBP17.22■□□□□ 0.35
SCN8A-215ENST00000638820 HOXC9P31274 260 aa17.21■□□□□ 0.35
SCN8A-215ENST00000638820 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.35
SCN8A-215ENST00000638820 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.35
SCN8A-215ENST00000638820 PPP4R2Q9NY27 417 aa17.21■□□□□ 0.35
SCN8A-215ENST00000638820 SBNO1A3KN83 1393 aa17.21■□□□□ 0.35
SCN8A-215ENST00000638820 PNPLA6Q8IY17 1366 aa17.21■□□□□ 0.35
SCN8A-215ENST00000638820 ELL2O00472 640 aaPredicted RBP17.2■□□□□ 0.34
SCN8A-215ENST00000638820 DCTN1Q14203 1278 aa17.2■□□□□ 0.34
SCN8A-215ENST00000638820 EYA1Q99502 592 aa17.19■□□□□ 0.34
SCN8A-215ENST00000638820 NALCNQ8IZF0 1738 aa17.19■□□□□ 0.34
SCN8A-215ENST00000638820 PLEKHF1Q96S99 279 aa17.19■□□□□ 0.34
SCN8A-215ENST00000638820 CDK12Q9NYV4 1490 aaPredicted RBP17.19■□□□□ 0.34
SCN8A-215ENST00000638820 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
SCN8A-215ENST00000638820 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
SCN8A-215ENST00000638820 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
SCN8A-215ENST00000638820 USP31Q70CQ4 1352 aa17.17■□□□□ 0.34
SCN8A-215ENST00000638820 FMN2Q9NZ56 1722 aa17.17■□□□□ 0.34
SCN8A-215ENST00000638820 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
SCN8A-215ENST00000638820 CHRNA2Q15822 529 aa17.17■□□□□ 0.34
SCN8A-215ENST00000638820 EXOSC9Q06265 439 aaKnown RBP17.16■□□□□ 0.34
SCN8A-215ENST00000638820 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
SCN8A-215ENST00000638820 BRINP3Q76B58 766 aa17.16■□□□□ 0.34
SCN8A-215ENST00000638820 BCAR3O75815 825 aa17.16■□□□□ 0.34
SCN8A-215ENST00000638820 IP6K1Q92551 441 aa17.16■□□□□ 0.34
SCN8A-215ENST00000638820 SSH2Q76I76 1423 aa17.15■□□□□ 0.34
SCN8A-215ENST00000638820 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
SCN8A-215ENST00000638820 PRDM11Q9NQV5 511 aa17.15■□□□□ 0.34
SCN8A-215ENST00000638820 LRRC59Q96AG4 307 aaKnown RBP17.15■□□□□ 0.34
SCN8A-215ENST00000638820 SMC4Q9NTJ3 1288 aa17.15■□□□□ 0.34
SCN8A-215ENST00000638820 TRIM35Q9UPQ4 493 aa17.15■□□□□ 0.34
SCN8A-215ENST00000638820 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
SCN8A-215ENST00000638820 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
SCN8A-215ENST00000638820 MCM10Q7L590 875 aa17.14■□□□□ 0.33
SCN8A-215ENST00000638820 EXOC6Q8TAG9 804 aa17.14■□□□□ 0.33
SCN8A-215ENST00000638820 ANKRD26Q9UPS8 1709 aa17.14■□□□□ 0.33
SCN8A-215ENST00000638820 GNAI1P63096 354 aa17.14■□□□□ 0.33
SCN8A-215ENST00000638820 GAS2L2Q8NHY3 880 aa17.14■□□□□ 0.33
SCN8A-215ENST00000638820 CLUAP1Q96AJ1 413 aa17.14■□□□□ 0.33
SCN8A-215ENST00000638820 MST1RQ04912 1400 aa17.13■□□□□ 0.33
SCN8A-215ENST00000638820 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
SCN8A-215ENST00000638820 FTSJ3Q8IY81 847 aaKnown RBP17.12■□□□□ 0.33
SCN8A-215ENST00000638820 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
SCN8A-215ENST00000638820 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
SCN8A-215ENST00000638820 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
SCN8A-215ENST00000638820 TOPAZ1Q8N9V7 1692 aa17.11■□□□□ 0.33
SCN8A-215ENST00000638820 RAPGEF4Q8WZA2 1011 aa17.11■□□□□ 0.33
SCN8A-215ENST00000638820 NCOA3Q9Y6Q9 1424 aa17.1■□□□□ 0.33
SCN8A-215ENST00000638820 ARHGEF25Q86VW2 580 aa17.1■□□□□ 0.33
SCN8A-215ENST00000638820 CRBNQ96SW2 442 aa17.1■□□□□ 0.33
SCN8A-215ENST00000638820 EVA1CP58658 441 aa17.09■□□□□ 0.33
SCN8A-215ENST00000638820 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
SCN8A-215ENST00000638820 NWD1Q149M9 1564 aa17.09■□□□□ 0.33
SCN8A-215ENST00000638820 NBPF6Q5VWK0 638 aa17.09■□□□□ 0.33
SCN8A-215ENST00000638820 NBPF4Q96M43 638 aa17.09■□□□□ 0.33
SCN8A-215ENST00000638820 DCCP43146 1447 aa17.09■□□□□ 0.33
SCN8A-215ENST00000638820 C1orf141Q5JVX7 400 aa17.09■□□□□ 0.33
SCN8A-215ENST00000638820 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
SCN8A-215ENST00000638820 SHPRHQ149N8 1683 aa17.08■□□□□ 0.33
SCN8A-215ENST00000638820 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
SCN8A-215ENST00000638820 USP35Q9P2H5 1018 aa17.08■□□□□ 0.32
SCN8A-215ENST00000638820 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
SCN8A-215ENST00000638820 MIS18AQ9NYP9 233 aa17.07■□□□□ 0.32
SCN8A-215ENST00000638820 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
SCN8A-215ENST00000638820 TSPYL4Q9UJ04 414 aa17.07■□□□□ 0.32
SCN8A-215ENST00000638820 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
SCN8A-215ENST00000638820 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
SCN8A-215ENST00000638820 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
SCN8A-215ENST00000638820 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
SCN8A-215ENST00000638820 GNAT3A8MTJ3 354 aa17.06■□□□□ 0.32
SCN8A-215ENST00000638820 RARSP54136 660 aaKnown RBP17.06■□□□□ 0.32
SCN8A-215ENST00000638820 TEFQ10587 303 aa17.06■□□□□ 0.32
SCN8A-215ENST00000638820 TRMT2AQ8IZ69 625 aaKnown RBP17.06■□□□□ 0.32
SCN8A-215ENST00000638820 TOM1L2Q6ZVM7 507 aa17.05■□□□□ 0.32
SCN8A-215ENST00000638820 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
SCN8A-215ENST00000638820 IL16Q14005 1332 aa17.05■□□□□ 0.32
SCN8A-215ENST00000638820 COG6Q9Y2V7 657 aa17.05■□□□□ 0.32
SCN8A-215ENST00000638820 KIF24Q5T7B8 1368 aa17.05■□□□□ 0.32
SCN8A-215ENST00000638820 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
SCN8A-215ENST00000638820 PANK1Q8TE04 598 aa17.04■□□□□ 0.32
SCN8A-215ENST00000638820 AXIN2Q9Y2T1 843 aa17.04■□□□□ 0.32
SCN8A-215ENST00000638820 PIK3C2AO00443 1686 aa17.04■□□□□ 0.32
SCN8A-215ENST00000638820 CFAP44Q96MT7 982 aa17.04■□□□□ 0.32
SCN8A-215ENST00000638820 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
SCN8A-215ENST00000638820 TWISTNBQ3B726 338 aaPredicted RBP17.03■□□□□ 0.32
SCN8A-215ENST00000638820 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
SCN8A-215ENST00000638820 RTL1A6NKG5 1358 aa17.03■□□□□ 0.32
SCN8A-215ENST00000638820 ZKSCAN2Q63HK3 967 aa17.03■□□□□ 0.32
SCN8A-215ENST00000638820 IPO8O15397 1037 aaKnown RBP17.02■□□□□ 0.32
SCN8A-215ENST00000638820 TOM1O60784 492 aa17.02■□□□□ 0.32
SCN8A-215ENST00000638820 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.32
SCN8A-215ENST00000638820 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.32
SCN8A-215ENST00000638820 UBAP1LF5GYI3 381 aa17.02■□□□□ 0.32
SCN8A-215ENST00000638820 TNS3Q68CZ2 1445 aa17.02■□□□□ 0.32
SCN8A-215ENST00000638820 KIAA0232Q92628 1395 aa17.02■□□□□ 0.31
SCN8A-215ENST00000638820 RNF123Q5XPI4 1314 aa17.02■□□□□ 0.31
SCN8A-215ENST00000638820 SSH1Q8WYL5 1049 aa17.02■□□□□ 0.31
SCN8A-215ENST00000638820 STRCQ7RTU9 1775 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms