RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 CABP1Q9NZU7 370 aa15.07■□□□□ 0
GFAP-228ENST00000638488 PUS7Q96PZ0 661 aaKnown RBP15.07■□□□□ 0
GFAP-228ENST00000638488 TAF3Q5VWG9 929 aa15.06■□□□□ 0
GFAP-228ENST00000638488 IPO4Q8TEX9 1081 aaKnown RBP15.06■□□□□ 0
GFAP-228ENST00000638488 PDLIM2Q96JY6 352 aa15.06■□□□□ 0
GFAP-228ENST00000638488 TERF2IPQ9NYB0 399 aa15.06■□□□□ 0
GFAP-228ENST00000638488 REREQ9P2R6 1566 aa15.06■□□□□ 0
GFAP-228ENST00000638488 U2SURPO15042 1029 aaKnown RBP15.06■□□□□ 0
GFAP-228ENST00000638488 TCP11L2Q8N4U5 519 aa15.06■□□□□ 0
GFAP-228ENST00000638488 RUNDC1Q96C34 613 aa15.06■□□□□ 0
GFAP-228ENST00000638488 E9PSI1 815 aa15.05■□□□□ 0
GFAP-228ENST00000638488 BCAR3O75815 825 aa15.05■□□□□ 0
GFAP-228ENST00000638488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.05■□□□□ 0
GFAP-228ENST00000638488 WWC1Q8IX03 1113 aa15.05■□□□□ 0
GFAP-228ENST00000638488 ZKSCAN5Q9Y2L8 839 aa15.05■□□□□ 0
GFAP-228ENST00000638488 ATAD2Q6PL18 1390 aa15.05■□□□□ -0
GFAP-228ENST00000638488 TAF7LQ5H9L4 462 aa15.04■□□□□ -0
GFAP-228ENST00000638488 HDGFL2Q7Z4V5 671 aaPredicted RBP15.04■□□□□ -0
GFAP-228ENST00000638488 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.04■□□□□ -0
GFAP-228ENST00000638488 ARHGEF40Q8TER5 1519 aa15.04■□□□□ -0
GFAP-228ENST00000638488 ZNF445P59923 1031 aa15.04■□□□□ -0
GFAP-228ENST00000638488 KLHL40Q2TBA0 621 aa15.04■□□□□ -0
GFAP-228ENST00000638488 CLEC17AQ6ZS10 378 aa15.04■□□□□ -0
GFAP-228ENST00000638488 SHPRHQ149N8 1683 aa15.04■□□□□ -0
GFAP-228ENST00000638488 SPATA31D1Q6ZQQ2 1576 aa15.04■□□□□ -0
GFAP-228ENST00000638488 TXNDC2Q86VQ3 553 aa15.03■□□□□ -0
GFAP-228ENST00000638488 PDZRN3Q9UPQ7 1066 aa15.03■□□□□ -0
GFAP-228ENST00000638488 GOLGA6L22H0YM25 854 aa15.03■□□□□ -0
GFAP-228ENST00000638488 FYB1O15117 783 aa15.03■□□□□ -0
GFAP-228ENST00000638488 XPCQ01831 940 aaPredicted RBP15.03■□□□□ -0
GFAP-228ENST00000638488 NGEFQ8N5V2 710 aa15.03■□□□□ -0
GFAP-228ENST00000638488 ABCC11Q96J66 1382 aa15.03■□□□□ -0
GFAP-228ENST00000638488 USP32Q8NFA0 1604 aa15.02■□□□□ -0
GFAP-228ENST00000638488 NSD2O96028 1365 aa15.02■□□□□ -0
GFAP-228ENST00000638488 FBLN1P23142 703 aa15.02□□□□□ -0.01
GFAP-228ENST00000638488 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
GFAP-228ENST00000638488 RBM25P49756 843 aaKnown RBP15□□□□□ -0.01
GFAP-228ENST00000638488 TMEM51Q9NW97 253 aa15□□□□□ -0.01
GFAP-228ENST00000638488 METP08581 1390 aa15□□□□□ -0.01
GFAP-228ENST00000638488 COG6Q9Y2V7 657 aa14.99□□□□□ -0.01
GFAP-228ENST00000638488 CD163L1Q9NR16 1453 aa14.99□□□□□ -0.01
GFAP-228ENST00000638488 MYRIPQ8NFW9 859 aa14.99□□□□□ -0.01
GFAP-228ENST00000638488 RWDD1Q9H446 243 aaPredicted RBP14.99□□□□□ -0.01
GFAP-228ENST00000638488 NCKAP5LQ9HCH0 1330 aa14.98□□□□□ -0.01
GFAP-228ENST00000638488 MFAP1P55081 439 aaKnown RBP14.98□□□□□ -0.01
GFAP-228ENST00000638488 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.98□□□□□ -0.01
GFAP-228ENST00000638488 HSP90AB1P08238 724 aaKnown RBP14.98□□□□□ -0.01
GFAP-228ENST00000638488 ARID3AQ99856 593 aa14.98□□□□□ -0.01
GFAP-228ENST00000638488 CCDC39Q9UFE4 941 aa14.98□□□□□ -0.01
GFAP-228ENST00000638488 TNRQ92752 1358 aa14.98□□□□□ -0.01
GFAP-228ENST00000638488 BCL2L13Q9BXK5 485 aa14.97□□□□□ -0.01
GFAP-228ENST00000638488 PANK1Q8TE04 598 aa14.97□□□□□ -0.01
GFAP-228ENST00000638488 PRIMPOLQ96LW4 560 aa14.96□□□□□ -0.01
GFAP-228ENST00000638488 CHMP4BQ9H444 224 aaKnown RBP14.96□□□□□ -0.01
GFAP-228ENST00000638488 NUTM2FA1L443 756 aa14.96□□□□□ -0.01
GFAP-228ENST00000638488 GTF2F1P35269 517 aaKnown RBP eCLIP14.96□□□□□ -0.01
GFAP-228ENST00000638488 PCDHB15Q9Y5E8 787 aa14.96□□□□□ -0.02
GFAP-228ENST00000638488 DDX49Q9Y6V7 483 aaKnown RBP14.96□□□□□ -0.02
GFAP-228ENST00000638488 HMGN5P82970 282 aaKnown RBP14.95□□□□□ -0.02
GFAP-228ENST00000638488 IQSEC2Q5JU85 1478 aa14.95□□□□□ -0.02
GFAP-228ENST00000638488 WASLO00401 505 aaPredicted RBP14.95□□□□□ -0.02
GFAP-228ENST00000638488 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
GFAP-228ENST00000638488 DIAPH1O60610 1272 aaKnown RBP14.93□□□□□ -0.02
GFAP-228ENST00000638488 ZRANB1Q9UGI0 708 aa14.93□□□□□ -0.02
GFAP-228ENST00000638488 SETD1AO15047 1707 aaKnown RBP14.92□□□□□ -0.02
GFAP-228ENST00000638488 NRXN3Q9Y4C0 1643 aa14.92□□□□□ -0.02
GFAP-228ENST00000638488 PPIP5K1Q6PFW1 1433 aa14.92□□□□□ -0.02
GFAP-228ENST00000638488 NME9Q86XW9 330 aa14.92□□□□□ -0.02
GFAP-228ENST00000638488 TSR2Q969E8 191 aaKnown RBP14.92□□□□□ -0.02
GFAP-228ENST00000638488 WDR63Q8IWG1 891 aa14.92□□□□□ -0.02
GFAP-228ENST00000638488 NUDT16Q96DE0 195 aaKnown RBP14.92□□□□□ -0.02
GFAP-228ENST00000638488 SLC26A8Q96RN1 970 aa14.92□□□□□ -0.02
GFAP-228ENST00000638488 DLC1Q96QB1 1528 aa14.91□□□□□ -0.02
GFAP-228ENST00000638488 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
GFAP-228ENST00000638488 ZSCAN23Q3MJ62 389 aa14.91□□□□□ -0.02
GFAP-228ENST00000638488 ZNF710Q8N1W2 664 aa14.91□□□□□ -0.02
GFAP-228ENST00000638488 RBSNQ9H1K0 784 aa14.91□□□□□ -0.02
GFAP-228ENST00000638488 TMEM2Q9UHN6 1383 aa14.91□□□□□ -0.02
GFAP-228ENST00000638488 BAG4O95429 457 aaKnown RBP14.91□□□□□ -0.02
GFAP-228ENST00000638488 LTKP29376 864 aa14.91□□□□□ -0.02
GFAP-228ENST00000638488 CBX1P83916 185 aa14.91□□□□□ -0.02
GFAP-228ENST00000638488 TMPOP42166 694 aaKnown RBP14.9□□□□□ -0.02
GFAP-228ENST00000638488 KIAA2012Q0VF49 1180 aa14.9□□□□□ -0.02
GFAP-228ENST00000638488 TNNQ9UQP3 1299 aa14.9□□□□□ -0.02
GFAP-228ENST00000638488 RARSP54136 660 aaKnown RBP14.9□□□□□ -0.02
GFAP-228ENST00000638488 PLEKHF1Q96S99 279 aa14.9□□□□□ -0.02
GFAP-228ENST00000638488 PHF23Q9BUL5 403 aaPredicted RBP14.9□□□□□ -0.02
GFAP-228ENST00000638488 HMOX1P09601 288 aa14.89□□□□□ -0.03
GFAP-228ENST00000638488 POLKQ9UBT6 870 aa14.89□□□□□ -0.03
GFAP-228ENST00000638488 EMILIN1Q9Y6C2 1016 aa14.89□□□□□ -0.03
GFAP-228ENST00000638488 CCDC27Q2M243 656 aa14.89□□□□□ -0.03
GFAP-228ENST00000638488 K7ELQ4 463 aaPredicted RBP14.88□□□□□ -0.03
GFAP-228ENST00000638488 SSFA2P28290 1259 aa14.88□□□□□ -0.03
GFAP-228ENST00000638488 KIF20BQ96Q89 1820 aa14.88□□□□□ -0.03
GFAP-228ENST00000638488 ATP2B3Q16720 1220 aa14.88□□□□□ -0.03
GFAP-228ENST00000638488 ANKRD26Q9UPS8 1709 aa14.88□□□□□ -0.03
GFAP-228ENST00000638488 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
GFAP-228ENST00000638488 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
GFAP-228ENST00000638488 RRS1Q15050 365 aaKnown RBP14.87□□□□□ -0.03
GFAP-228ENST00000638488 MED14O60244 1454 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms