RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 C1orf115Q9H7X2 142 aa5.56□□□□□ -1.52
GYPB-216ENST00000638448 ATP1B4Q9UN42 357 aaPredicted RBP5.56□□□□□ -1.52
GYPB-216ENST00000638448 SOBPA7XYQ1 873 aa5.55□□□□□ -1.52
GYPB-216ENST00000638448 WIPF1O43516 503 aa5.55□□□□□ -1.52
GYPB-216ENST00000638448 TRAK2O60296 914 aa5.55□□□□□ -1.52
GYPB-216ENST00000638448 UBTFP17480 764 aaKnown RBP5.55□□□□□ -1.52
GYPB-216ENST00000638448 VEGFBP49765 207 aa5.55□□□□□ -1.52
GYPB-216ENST00000638448 SCARF1Q14162 830 aa5.55□□□□□ -1.52
GYPB-216ENST00000638448 NR6A1Q15406 480 aa5.55□□□□□ -1.52
GYPB-216ENST00000638448 VASH1Q7L8A9 365 aaPredicted RBP5.55□□□□□ -1.52
GYPB-216ENST00000638448 NXF1Q9UBU9 619 aaKnown RBP5.55□□□□□ -1.52
GYPB-216ENST00000638448 FKBPLQ9UIM3 349 aa5.55□□□□□ -1.52
GYPB-216ENST00000638448 AP1G2O75843 785 aa5.54□□□□□ -1.52
GYPB-216ENST00000638448 USP17L8P0C7I0 530 aa5.54□□□□□ -1.52
GYPB-216ENST00000638448 C6orf118Q5T5N4 469 aa5.54□□□□□ -1.52
GYPB-216ENST00000638448 MEIOBQ8N635 442 aa5.54□□□□□ -1.52
GYPB-216ENST00000638448 ARHGAP9Q9BRR9 750 aa5.54□□□□□ -1.52
GYPB-216ENST00000638448 HMX1Q9NP08 348 aaPredicted RBP5.54□□□□□ -1.52
GYPB-216ENST00000638448 APBB1O00213 710 aa5.53□□□□□ -1.52
GYPB-216ENST00000638448 PDXDC2PQ6P474 469 aa5.53□□□□□ -1.52
GYPB-216ENST00000638448 FNBP4Q8N3X1 1017 aaPredicted RBP5.53□□□□□ -1.52
GYPB-216ENST00000638448 EPS8L1Q8TE68 723 aa5.53□□□□□ -1.52
GYPB-216ENST00000638448 SLC10A4Q96EP9 437 aa5.53□□□□□ -1.52
GYPB-216ENST00000638448 OCSTAMPQ9BR26 566 aa5.53□□□□□ -1.52
GYPB-216ENST00000638448 ZC3H4Q9UPT8 1303 aaKnown RBP5.52□□□□□ -1.53
GYPB-216ENST00000638448 H3BM21 787 aa5.52□□□□□ -1.53
GYPB-216ENST00000638448 BMP2P12643 396 aa5.52□□□□□ -1.53
GYPB-216ENST00000638448 TMEM259Q4ZIN3 620 aa5.52□□□□□ -1.53
GYPB-216ENST00000638448 PROSER2Q86WR7 435 aaPredicted RBP5.52□□□□□ -1.53
GYPB-216ENST00000638448 CCDC116Q8IYX3 515 aa5.52□□□□□ -1.53
GYPB-216ENST00000638448 LINC00528Q8N1L1 170 aa5.52□□□□□ -1.53
GYPB-216ENST00000638448 SLC16A10Q8TF71 515 aa5.52□□□□□ -1.53
GYPB-216ENST00000638448 ERBB4Q15303 1308 aa5.51□□□□□ -1.53
GYPB-216ENST00000638448 RAD21O60216 631 aa5.51□□□□□ -1.53
GYPB-216ENST00000638448 RFC5P40937 340 aa5.51□□□□□ -1.53
GYPB-216ENST00000638448 PPP1R26Q5T8A7 1209 aaPredicted RBP5.51□□□□□ -1.53
GYPB-216ENST00000638448 NPAS3Q8IXF0 933 aa5.51□□□□□ -1.53
GYPB-216ENST00000638448 EMILIN1Q9Y6C2 1016 aa5.51□□□□□ -1.53
GYPB-216ENST00000638448 UPP2O95045 317 aa5.5□□□□□ -1.53
GYPB-216ENST00000638448 GMPRP36959 345 aa5.5□□□□□ -1.53
GYPB-216ENST00000638448 INSM1Q01101 510 aaPredicted RBP5.5□□□□□ -1.53
GYPB-216ENST00000638448 ZBTB33Q86T24 672 aa5.5□□□□□ -1.53
GYPB-216ENST00000638448 IRF7Q92985 503 aa5.5□□□□□ -1.53
GYPB-216ENST00000638448 CLUAP1Q96AJ1 413 aa5.5□□□□□ -1.53
GYPB-216ENST00000638448 KCTD15Q96SI1 283 aaPredicted RBP5.5□□□□□ -1.53
GYPB-216ENST00000638448 MAN1A2O60476 641 aa5.49□□□□□ -1.53
GYPB-216ENST00000638448 PTK2Q05397 1052 aa5.49□□□□□ -1.53
GYPB-216ENST00000638448 CBLBQ13191 982 aa5.49□□□□□ -1.53
GYPB-216ENST00000638448 INTS6LQ5JSJ4 861 aaKnown RBP5.49□□□□□ -1.53
GYPB-216ENST00000638448 ADAM32Q8TC27 787 aa5.49□□□□□ -1.53
GYPB-216ENST00000638448 DNMT3LQ9UJW3 386 aa5.49□□□□□ -1.53
GYPB-216ENST00000638448 TSEN34Q9BSV6 310 aaKnown RBP5.48□□□□□ -1.53
GYPB-216ENST00000638448 TRIM34Q9BYJ4 488 aa5.48□□□□□ -1.53
GYPB-216ENST00000638448 PGPEP1Q9NXJ5 209 aa5.48□□□□□ -1.53
GYPB-216ENST00000638448 STK17AQ9UEE5 414 aa5.48□□□□□ -1.53
GYPB-216ENST00000638448 SERPINA10Q9UK55 444 aa5.48□□□□□ -1.53
GYPB-216ENST00000638448 CDV3Q9UKY7 258 aaKnown RBP5.48□□□□□ -1.53
GYPB-216ENST00000638448 GPSM3Q9Y4H4 160 aa5.48□□□□□ -1.53
GYPB-216ENST00000638448 SOS2Q07890 1332 aaPredicted RBP5.48□□□□□ -1.53
GYPB-216ENST00000638448 CCDC82Q8N4S0 544 aa5.47□□□□□ -1.53
GYPB-216ENST00000638448 COG6Q9Y2V7 657 aa5.47□□□□□ -1.53
GYPB-216ENST00000638448 ARID3CA6NKF2 412 aa5.46□□□□□ -1.54
GYPB-216ENST00000638448 VSIG8P0DPA2 414 aa5.46□□□□□ -1.54
GYPB-216ENST00000638448 RAB15P59190 212 aa5.46□□□□□ -1.54
GYPB-216ENST00000638448 NBPF20Q3BBV1 942 aa5.46□□□□□ -1.54
GYPB-216ENST00000638448 Q6ZVU0 165 aa5.46□□□□□ -1.54
GYPB-216ENST00000638448 PNMA1Q8ND90 353 aa5.46□□□□□ -1.54
GYPB-216ENST00000638448 TTLL8A6PVC2 850 aa5.45□□□□□ -1.54
GYPB-216ENST00000638448 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
GYPB-216ENST00000638448 DHX9Q08211 1270 aaKnown RBP5.45□□□□□ -1.54
GYPB-216ENST00000638448 WWC1Q8IX03 1113 aa5.45□□□□□ -1.54
GYPB-216ENST00000638448 AGBL1Q96MI9 1066 aa5.45□□□□□ -1.54
GYPB-216ENST00000638448 PRM3Q9NNZ6 103 aa5.45□□□□□ -1.54
GYPB-216ENST00000638448 TMPRSS4Q9NRS4 437 aa5.45□□□□□ -1.54
GYPB-216ENST00000638448 SPINT1O43278 529 aa5.44□□□□□ -1.54
GYPB-216ENST00000638448 PPFIA3O75145 1194 aa5.44□□□□□ -1.54
GYPB-216ENST00000638448 RELBQ01201 579 aa5.44□□□□□ -1.54
GYPB-216ENST00000638448 DZIP3Q86Y13 1208 aaKnown RBP5.44□□□□□ -1.54
GYPB-216ENST00000638448 ZNF784Q8NCA9 323 aaPredicted RBP5.44□□□□□ -1.54
GYPB-216ENST00000638448 MTMR14Q8NCE2 650 aa5.44□□□□□ -1.54
GYPB-216ENST00000638448 POM121Q96HA1 1249 aa5.44□□□□□ -1.54
GYPB-216ENST00000638448 GJD4Q96KN9 370 aaPredicted RBP5.44□□□□□ -1.54
GYPB-216ENST00000638448 FIGNL2A6NMB9 653 aa5.43□□□□□ -1.54
GYPB-216ENST00000638448 ERVH48-1M5A8F1 160 aa5.43□□□□□ -1.54
GYPB-216ENST00000638448 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.43□□□□□ -1.54
GYPB-216ENST00000638448 CCDC97Q96F63 343 aaPredicted RBP5.43□□□□□ -1.54
GYPB-216ENST00000638448 ARID3AQ99856 593 aa5.43□□□□□ -1.54
GYPB-216ENST00000638448 PODXL2Q9NZ53 605 aa5.43□□□□□ -1.54
GYPB-216ENST00000638448 ESPNB1AK53 854 aa5.42□□□□□ -1.54
GYPB-216ENST00000638448 FBXO45P0C2W1 286 aa5.42□□□□□ -1.54
GYPB-216ENST00000638448 PDIA4P13667 645 aaKnown RBP5.42□□□□□ -1.54
GYPB-216ENST00000638448 CTSOP43234 321 aaPredicted RBP5.42□□□□□ -1.54
GYPB-216ENST00000638448 PTSQ03393 145 aa5.42□□□□□ -1.54
GYPB-216ENST00000638448 ZSCAN1Q8NBB4 408 aa5.42□□□□□ -1.54
GYPB-216ENST00000638448 INSM2Q96T92 566 aaPredicted RBP5.42□□□□□ -1.54
GYPB-216ENST00000638448 SNRKQ9NRH2 765 aa5.42□□□□□ -1.54
GYPB-216ENST00000638448 GPR37L1O60883 481 aa5.41□□□□□ -1.54
GYPB-216ENST00000638448 LILRA1O75019 489 aa5.41□□□□□ -1.54
GYPB-216ENST00000638448 PPP1R15AO75807 674 aaPredicted RBP5.41□□□□□ -1.54
GYPB-216ENST00000638448 ADH1AP07327 375 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms