RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 GFRA3O60609 400 aa9.54□□□□□ -0.88
SCARB2-206ENST00000638175 SLC10A3P09131 477 aa9.54□□□□□ -0.88
SCARB2-206ENST00000638175 SH3D19Q5HYK7 790 aa9.54□□□□□ -0.88
SCARB2-206ENST00000638175 RSPH4AQ5TD94 716 aa9.54□□□□□ -0.88
SCARB2-206ENST00000638175 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
SCARB2-206ENST00000638175 PRR14Q9BWN1 585 aa9.54□□□□□ -0.88
SCARB2-206ENST00000638175 RTEL1-TNFRSF6BF6WH68 1400 aa9.54□□□□□ -0.88
SCARB2-206ENST00000638175 C9orf84Q5VXU9 1444 aa9.54□□□□□ -0.88
SCARB2-206ENST00000638175 EIF2AK4Q9P2K8 1649 aaKnown RBP9.53□□□□□ -0.88
SCARB2-206ENST00000638175 BEGAINQ9BUH8 593 aa9.53□□□□□ -0.88
SCARB2-206ENST00000638175 V9GY48 417 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-206ENST00000638175 YEATS2Q9ULM3 1422 aa9.53□□□□□ -0.88
SCARB2-206ENST00000638175 ATP10AO60312 1499 aa9.53□□□□□ -0.88
SCARB2-206ENST00000638175 AGLP35573 1532 aa9.52□□□□□ -0.88
SCARB2-206ENST00000638175 ADAMTSL3P82987 1691 aa9.52□□□□□ -0.89
SCARB2-206ENST00000638175 LCE2BO14633 110 aa9.52□□□□□ -0.89
SCARB2-206ENST00000638175 CD46P15529 392 aa9.52□□□□□ -0.89
SCARB2-206ENST00000638175 ZNF644Q9H582 1327 aaPredicted RBP9.52□□□□□ -0.89
SCARB2-206ENST00000638175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCARB2-206ENST00000638175 DAPK1P53355 1430 aa9.51□□□□□ -0.89
SCARB2-206ENST00000638175 ACTN4O43707 911 aaKnown RBP9.51□□□□□ -0.89
SCARB2-206ENST00000638175 CFHP08603 1231 aa9.51□□□□□ -0.89
SCARB2-206ENST00000638175 SULF1Q8IWU6 871 aa9.51□□□□□ -0.89
SCARB2-206ENST00000638175 AFAP1Q8N556 730 aa9.51□□□□□ -0.89
SCARB2-206ENST00000638175 TIMELESSQ9UNS1 1208 aa9.51□□□□□ -0.89
SCARB2-206ENST00000638175 SPAG9O60271 1321 aaKnown RBP9.51□□□□□ -0.89
SCARB2-206ENST00000638175 RRBP1Q9P2E9 1410 aaKnown RBP9.5□□□□□ -0.89
SCARB2-206ENST00000638175 TLL1O43897 1013 aa9.5□□□□□ -0.89
SCARB2-206ENST00000638175 HNRNPMP52272 730 aaKnown RBP eCLIP9.5□□□□□ -0.89
SCARB2-206ENST00000638175 LAPTM4AQ15012 233 aa9.5□□□□□ -0.89
SCARB2-206ENST00000638175 MADDQ8WXG6 1647 aa9.49□□□□□ -0.89
SCARB2-206ENST00000638175 MROH2AA6NES4 1674 aa9.49□□□□□ -0.89
SCARB2-206ENST00000638175 GCC2Q8IWJ2 1684 aa9.49□□□□□ -0.89
SCARB2-206ENST00000638175 A2MP01023 1474 aa9.49□□□□□ -0.89
SCARB2-206ENST00000638175 GGCXP38435 758 aa9.49□□□□□ -0.89
SCARB2-206ENST00000638175 KMT5BQ4FZB7 885 aa9.49□□□□□ -0.89
SCARB2-206ENST00000638175 RSPH6AQ9H0K4 717 aa9.49□□□□□ -0.89
SCARB2-206ENST00000638175 RNF17Q9BXT8 1623 aaKnown RBP9.49□□□□□ -0.89
SCARB2-206ENST00000638175 ZC3H13Q5T200 1668 aaKnown RBP9.48□□□□□ -0.89
SCARB2-206ENST00000638175 RIMS1Q86UR5 1692 aaKnown RBP9.48□□□□□ -0.89
SCARB2-206ENST00000638175 ABCC5O15440 1437 aa9.48□□□□□ -0.89
SCARB2-206ENST00000638175 ADGRL2O95490 1459 aa9.48□□□□□ -0.89
SCARB2-206ENST00000638175 DUOX2Q9NRD8 1548 aa9.48□□□□□ -0.89
SCARB2-206ENST00000638175 FAM135AQ9P2D6 1515 aa9.48□□□□□ -0.89
SCARB2-206ENST00000638175 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
SCARB2-206ENST00000638175 SKIV2LQ15477 1246 aaKnown RBP9.48□□□□□ -0.89
SCARB2-206ENST00000638175 DIXDC1Q155Q3 683 aa9.48□□□□□ -0.89
SCARB2-206ENST00000638175 DEPDC5O75140 1603 aa9.47□□□□□ -0.89
SCARB2-206ENST00000638175 TSPY4P0CV99 314 aa9.47□□□□□ -0.89
SCARB2-206ENST00000638175 TSPY10P0CW01 314 aa9.47□□□□□ -0.89
SCARB2-206ENST00000638175 EMID1Q96A84 441 aaPredicted RBP9.47□□□□□ -0.89
SCARB2-206ENST00000638175 MYSM1Q5VVJ2 828 aa9.46□□□□□ -0.9
SCARB2-206ENST00000638175 NRG2O14511 850 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-206ENST00000638175 PCMTD1Q96MG8 357 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-206ENST00000638175 ERBINQ96RT1 1412 aa9.45□□□□□ -0.9
SCARB2-206ENST00000638175 CLTCQ00610 1675 aaKnown RBP9.45□□□□□ -0.9
SCARB2-206ENST00000638175 DDX11L8A8MPP1 907 aa9.44□□□□□ -0.9
SCARB2-206ENST00000638175 FAM50AQ14320 339 aaKnown RBP9.44□□□□□ -0.9
SCARB2-206ENST00000638175 TRAF7Q6Q0C0 670 aa9.44□□□□□ -0.9
SCARB2-206ENST00000638175 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
SCARB2-206ENST00000638175 ANKRD30AQ9BXX3 1397 aa9.44□□□□□ -0.9
SCARB2-206ENST00000638175 PRDM15P57071 1507 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-206ENST00000638175 C3P01024 1663 aa9.44□□□□□ -0.9
SCARB2-206ENST00000638175 CEP152O94986 1710 aa9.43□□□□□ -0.9
SCARB2-206ENST00000638175 MROH1Q8NDA8 1641 aa9.43□□□□□ -0.9
SCARB2-206ENST00000638175 DHX29Q7Z478 1369 aaKnown RBP9.43□□□□□ -0.9
SCARB2-206ENST00000638175 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-206ENST00000638175 S1PR4O95977 384 aa9.43□□□□□ -0.9
SCARB2-206ENST00000638175 PPARGC1BQ86YN6 1023 aaKnown RBP9.43□□□□□ -0.9
SCARB2-206ENST00000638175 SPIRE2Q8WWL2 714 aa9.43□□□□□ -0.9
SCARB2-206ENST00000638175 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCARB2-206ENST00000638175 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
SCARB2-206ENST00000638175 UNC13BO14795 1591 aa9.42□□□□□ -0.9
SCARB2-206ENST00000638175 NCOA1Q15788 1441 aa9.42□□□□□ -0.9
SCARB2-206ENST00000638175 ROCK1Q13464 1354 aa9.42□□□□□ -0.9
SCARB2-206ENST00000638175 KIF15Q9NS87 1388 aa9.42□□□□□ -0.9
SCARB2-206ENST00000638175 ARID4BQ4LE39 1312 aaPredicted RBP9.42□□□□□ -0.9
SCARB2-206ENST00000638175 SLC19A1P41440 591 aa9.42□□□□□ -0.9
SCARB2-206ENST00000638175 TUSC1Q2TAM9 212 aa9.42□□□□□ -0.9
SCARB2-206ENST00000638175 PUS10Q3MIT2 529 aaKnown RBP9.42□□□□□ -0.9
SCARB2-206ENST00000638175 SETD1BQ9UPS6 1966 aaKnown RBP9.42□□□□□ -0.9
SCARB2-206ENST00000638175 KDM5DQ9BY66 1539 aa9.41□□□□□ -0.9
SCARB2-206ENST00000638175 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
SCARB2-206ENST00000638175 NR1I2O75469 434 aa9.41□□□□□ -0.9
SCARB2-206ENST00000638175 GJA5P36382 358 aa9.41□□□□□ -0.9
SCARB2-206ENST00000638175 CLK2P49760 499 aaKnown RBP9.41□□□□□ -0.9
SCARB2-206ENST00000638175 SCUBE3Q8IX30 993 aa9.41□□□□□ -0.9
SCARB2-206ENST00000638175 CAMSAP1Q5T5Y3 1602 aa9.41□□□□□ -0.9
SCARB2-206ENST00000638175 PREX1Q8TCU6 1659 aa9.4□□□□□ -0.9
SCARB2-206ENST00000638175 ADH1BP00325 375 aa9.4□□□□□ -0.9
SCARB2-206ENST00000638175 TRIM67Q6ZTA4 783 aa9.4□□□□□ -0.9
SCARB2-206ENST00000638175 C14orf37Q86TY3 774 aa9.4□□□□□ -0.9
SCARB2-206ENST00000638175 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
SCARB2-206ENST00000638175 PTPRKQ15262 1439 aa9.39□□□□□ -0.91
SCARB2-206ENST00000638175 SPTLC1O15269 473 aa9.39□□□□□ -0.91
SCARB2-206ENST00000638175 GCGRP47871 477 aa9.39□□□□□ -0.91
SCARB2-206ENST00000638175 LIAT1Q6ZQX7 453 aa9.39□□□□□ -0.91
SCARB2-206ENST00000638175 RDH13Q8NBN7 331 aa9.39□□□□□ -0.91
SCARB2-206ENST00000638175 PTPRMP28827 1452 aa9.39□□□□□ -0.91
SCARB2-206ENST00000638175 VWDEQ8N2E2 1590 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms