RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CD2BP2O95400 341 aaKnown RBP14.71□□□□□ -0.05
CAPN3-221ENST00000638141 IRX5P78411 483 aaPredicted RBP14.71□□□□□ -0.05
CAPN3-221ENST00000638141 RUNDC1Q96C34 613 aa14.71□□□□□ -0.05
CAPN3-221ENST00000638141 CWC22Q9HCG8 908 aaKnown RBP14.71□□□□□ -0.05
CAPN3-221ENST00000638141 DIAPH3Q9NSV4 1193 aa14.71□□□□□ -0.05
CAPN3-221ENST00000638141 MBD3O95983 291 aa14.71□□□□□ -0.05
CAPN3-221ENST00000638141 UVSSAQ2YD98 709 aa14.71□□□□□ -0.05
CAPN3-221ENST00000638141 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.05
CAPN3-221ENST00000638141 ZNF771Q7L3S4 317 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-221ENST00000638141 DZIP1LQ8IYY4 767 aaKnown RBP14.7□□□□□ -0.06
CAPN3-221ENST00000638141 PTMAP06454 111 aaKnown RBP14.7□□□□□ -0.06
CAPN3-221ENST00000638141 CREBRFQ8IUR6 639 aa14.7□□□□□ -0.06
CAPN3-221ENST00000638141 GPT2Q8TD30 523 aa14.7□□□□□ -0.06
CAPN3-221ENST00000638141 SPAG9O60271 1321 aaKnown RBP14.7□□□□□ -0.06
CAPN3-221ENST00000638141 CHRM1P11229 460 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-221ENST00000638141 NEURL4Q96JN8 1562 aa14.69□□□□□ -0.06
CAPN3-221ENST00000638141 TSPYL1Q9H0U9 437 aa14.69□□□□□ -0.06
CAPN3-221ENST00000638141 VGLL3A8MV65 326 aa14.69□□□□□ -0.06
CAPN3-221ENST00000638141 FAM184AQ8NB25 1140 aa14.69□□□□□ -0.06
CAPN3-221ENST00000638141 ADGRB2O60241 1585 aa14.68□□□□□ -0.06
CAPN3-221ENST00000638141 USP32Q8NFA0 1604 aa14.68□□□□□ -0.06
CAPN3-221ENST00000638141 NUCB1Q02818 461 aa14.68□□□□□ -0.06
CAPN3-221ENST00000638141 TULP2O00295 520 aa14.67□□□□□ -0.06
CAPN3-221ENST00000638141 RABEP1Q15276 862 aa14.67□□□□□ -0.06
CAPN3-221ENST00000638141 RGL3Q3MIN7 710 aa14.67□□□□□ -0.06
CAPN3-221ENST00000638141 TEX2Q8IWB9 1127 aa14.67□□□□□ -0.06
CAPN3-221ENST00000638141 TMEM63CQ9P1W3 806 aa14.67□□□□□ -0.06
CAPN3-221ENST00000638141 KIDINS220Q9ULH0 1771 aa14.67□□□□□ -0.06
CAPN3-221ENST00000638141 SLFN14P0C7P3 912 aa14.67□□□□□ -0.06
CAPN3-221ENST00000638141 TSC1Q92574 1164 aa14.67□□□□□ -0.06
CAPN3-221ENST00000638141 HECW2Q9P2P5 1572 aa14.66□□□□□ -0.06
CAPN3-221ENST00000638141 TIGD1Q96MW7 591 aa14.66□□□□□ -0.06
CAPN3-221ENST00000638141 TNNQ9UQP3 1299 aa14.66□□□□□ -0.06
CAPN3-221ENST00000638141 MLH3Q9UHC1 1453 aa14.66□□□□□ -0.06
CAPN3-221ENST00000638141 SPDYE4A6NLX3 237 aa14.66□□□□□ -0.06
CAPN3-221ENST00000638141 U2AF2P26368 475 aaKnown RBP eCLIP14.66□□□□□ -0.06
CAPN3-221ENST00000638141 JARID2Q92833 1246 aaPredicted RBP14.66□□□□□ -0.06
CAPN3-221ENST00000638141 TSPY26PQ9H489 355 aa14.66□□□□□ -0.06
CAPN3-221ENST00000638141 SYCE3A1L190 88 aa14.65□□□□□ -0.06
CAPN3-221ENST00000638141 CHAF1AQ13111 956 aaPredicted RBP14.65□□□□□ -0.06
CAPN3-221ENST00000638141 ATP7AQ04656 1500 aa14.65□□□□□ -0.06
CAPN3-221ENST00000638141 ZFYVE16Q7Z3T8 1539 aa14.65□□□□□ -0.06
CAPN3-221ENST00000638141 MYO3AQ8NEV4 1616 aa14.65□□□□□ -0.06
CAPN3-221ENST00000638141 INO80Q9ULG1 1556 aaPredicted RBP14.64□□□□□ -0.07
CAPN3-221ENST00000638141 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
CAPN3-221ENST00000638141 CALCOCO1Q9P1Z2 691 aa14.64□□□□□ -0.07
CAPN3-221ENST00000638141 PRPF40AO75400 957 aaKnown RBP14.63□□□□□ -0.07
CAPN3-221ENST00000638141 KCNJ4P48050 445 aa14.63□□□□□ -0.07
CAPN3-221ENST00000638141 PAXIP1Q6ZW49 1069 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-221ENST00000638141 SYAP1Q96A49 352 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-221ENST00000638141 RBM27Q9P2N5 1060 aaKnown RBP14.63□□□□□ -0.07
CAPN3-221ENST00000638141 DDX41Q9UJV9 622 aaKnown RBP14.63□□□□□ -0.07
CAPN3-221ENST00000638141 MORC2Q9Y6X9 1032 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-221ENST00000638141 TPM3P06753 285 aa14.63□□□□□ -0.07
CAPN3-221ENST00000638141 CTNNA3Q9UI47 895 aa14.63□□□□□ -0.07
CAPN3-221ENST00000638141 ABCA6Q8N139 1617 aa14.63□□□□□ -0.07
CAPN3-221ENST00000638141 SBNO2Q9Y2G9 1366 aa14.63□□□□□ -0.07
CAPN3-221ENST00000638141 PHF14O94880 888 aa14.62□□□□□ -0.07
CAPN3-221ENST00000638141 IRX3P78415 501 aaPredicted RBP14.62□□□□□ -0.07
CAPN3-221ENST00000638141 TRPM2O94759 1503 aa14.62□□□□□ -0.07
CAPN3-221ENST00000638141 ANKRD36BQ8N2N9 1353 aa14.62□□□□□ -0.07
CAPN3-221ENST00000638141 ZBTB22O15209 634 aa14.62□□□□□ -0.07
CAPN3-221ENST00000638141 ERVK-7P63135 1459 aa14.62□□□□□ -0.07
CAPN3-221ENST00000638141 ABCC11Q96J66 1382 aa14.62□□□□□ -0.07
CAPN3-221ENST00000638141 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
CAPN3-221ENST00000638141 TCP11L2Q8N4U5 519 aa14.61□□□□□ -0.07
CAPN3-221ENST00000638141 DIP2CQ9Y2E4 1556 aa14.61□□□□□ -0.07
CAPN3-221ENST00000638141 ARHGEF40Q8TER5 1519 aa14.61□□□□□ -0.07
CAPN3-221ENST00000638141 RIOK3O14730 519 aaKnown RBP14.61□□□□□ -0.07
CAPN3-221ENST00000638141 TERF2Q15554 542 aa14.61□□□□□ -0.07
CAPN3-221ENST00000638141 CHD1LQ86WJ1 897 aa14.61□□□□□ -0.07
CAPN3-221ENST00000638141 GCC1Q96CN9 775 aa14.6□□□□□ -0.07
CAPN3-221ENST00000638141 ZBTB40Q9NUA8 1239 aa14.6□□□□□ -0.07
CAPN3-221ENST00000638141 ATF7IPQ6VMQ6 1270 aa14.6□□□□□ -0.07
CAPN3-221ENST00000638141 TBC1D9Q6ZT07 1266 aa14.6□□□□□ -0.07
CAPN3-221ENST00000638141 MED14O60244 1454 aa14.59□□□□□ -0.07
CAPN3-221ENST00000638141 NOS1P29475 1434 aa14.59□□□□□ -0.07
CAPN3-221ENST00000638141 KIAA1524Q8TCG1 905 aa14.59□□□□□ -0.07
CAPN3-221ENST00000638141 SIGLEC1Q9BZZ2 1709 aa14.59□□□□□ -0.07
CAPN3-221ENST00000638141 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
CAPN3-221ENST00000638141 YY1AP1Q9H869 796 aa14.59□□□□□ -0.07
CAPN3-221ENST00000638141 IL16Q14005 1332 aa14.58□□□□□ -0.07
CAPN3-221ENST00000638141 ZDHHC9Q9Y397 364 aa14.58□□□□□ -0.08
CAPN3-221ENST00000638141 IPO8O15397 1037 aaKnown RBP14.58□□□□□ -0.08
CAPN3-221ENST00000638141 TRIM27P14373 513 aa14.58□□□□□ -0.08
CAPN3-221ENST00000638141 NCBP1Q09161 790 aaKnown RBP14.58□□□□□ -0.08
CAPN3-221ENST00000638141 RGS22Q8NE09 1264 aa14.58□□□□□ -0.08
CAPN3-221ENST00000638141 CDC45O75419 566 aa14.57□□□□□ -0.08
CAPN3-221ENST00000638141 RNF214Q8ND24 703 aa14.57□□□□□ -0.08
CAPN3-221ENST00000638141 FAM53CQ9NYF3 392 aa14.57□□□□□ -0.08
CAPN3-221ENST00000638141 CFAP53Q96M91 514 aa14.56□□□□□ -0.08
CAPN3-221ENST00000638141 MYOM2P54296 1465 aa14.56□□□□□ -0.08
CAPN3-221ENST00000638141 IGSF3O75054 1194 aa14.56□□□□□ -0.08
CAPN3-221ENST00000638141 ITPRIPQ8IWB1 547 aa14.56□□□□□ -0.08
CAPN3-221ENST00000638141 SMC4Q9NTJ3 1288 aa14.56□□□□□ -0.08
CAPN3-221ENST00000638141 CAPN2P17655 700 aa14.55□□□□□ -0.08
CAPN3-221ENST00000638141 PKP1Q13835 747 aa14.55□□□□□ -0.08
CAPN3-221ENST00000638141 KRT222Q8N1A0 295 aa14.55□□□□□ -0.08
CAPN3-221ENST00000638141 BCL2L13Q9BXK5 485 aa14.55□□□□□ -0.08
CAPN3-221ENST00000638141 NSFL1CQ9UNZ2 370 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms