RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-222ENST00000638134 CPS1P31327 1500 aa19.56■□□□□ 0.72
CLCN2-222ENST00000638134 UQCRHLA0A096LP55 91 aa19.55■□□□□ 0.72
CLCN2-222ENST00000638134 UQCRHP07919 91 aa19.55■□□□□ 0.72
CLCN2-222ENST00000638134 NOL7Q9UMY1 257 aaKnown RBP19.55■□□□□ 0.72
CLCN2-222ENST00000638134 DLC1Q96QB1 1528 aa19.54■□□□□ 0.72
CLCN2-222ENST00000638134 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
CLCN2-222ENST00000638134 TNPO1Q92973 898 aaKnown RBP19.54■□□□□ 0.72
CLCN2-222ENST00000638134 SNX21Q969T3 373 aa19.54■□□□□ 0.72
CLCN2-222ENST00000638134 RAB3GAP1Q15042 981 aa19.53■□□□□ 0.72
CLCN2-222ENST00000638134 PDZRN3Q9UPQ7 1066 aa19.52■□□□□ 0.72
CLCN2-222ENST00000638134 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.52■□□□□ 0.72
CLCN2-222ENST00000638134 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
CLCN2-222ENST00000638134 MCM5P33992 734 aa19.52■□□□□ 0.72
CLCN2-222ENST00000638134 CCDC94Q9BW85 323 aaPredicted RBP19.52■□□□□ 0.72
CLCN2-222ENST00000638134 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
CLCN2-222ENST00000638134 FAM135BQ49AJ0 1406 aa19.51■□□□□ 0.71
CLCN2-222ENST00000638134 NWD1Q149M9 1564 aa19.51■□□□□ 0.71
CLCN2-222ENST00000638134 COG6Q9Y2V7 657 aa19.5■□□□□ 0.71
CLCN2-222ENST00000638134 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
CLCN2-222ENST00000638134 RWDD1Q9H446 243 aaPredicted RBP19.49■□□□□ 0.71
CLCN2-222ENST00000638134 TULP4Q9NRJ4 1543 aa19.49■□□□□ 0.71
CLCN2-222ENST00000638134 TNNT2P45379 298 aaPredicted RBP19.49■□□□□ 0.71
CLCN2-222ENST00000638134 PROSER2Q86WR7 435 aaPredicted RBP19.49■□□□□ 0.71
CLCN2-222ENST00000638134 NUTM2FA1L443 756 aa19.48■□□□□ 0.71
CLCN2-222ENST00000638134 CANXP27824 592 aaKnown RBP19.48■□□□□ 0.71
CLCN2-222ENST00000638134 TMF1P82094 1093 aa19.48■□□□□ 0.71
CLCN2-222ENST00000638134 SIRT1Q96EB6 747 aa19.48■□□□□ 0.71
CLCN2-222ENST00000638134 CABP2Q9NPB3 220 aa19.48■□□□□ 0.71
CLCN2-222ENST00000638134 SASS6Q6UVJ0 657 aa19.48■□□□□ 0.71
CLCN2-222ENST00000638134 CLEC17AQ6ZS10 378 aa19.48■□□□□ 0.71
CLCN2-222ENST00000638134 GTPBP4Q9BZE4 634 aaKnown RBP19.48■□□□□ 0.71
CLCN2-222ENST00000638134 ZHX1Q9UKY1 873 aaPredicted RBP19.48■□□□□ 0.71
CLCN2-222ENST00000638134 KIF20AO95235 890 aa19.47■□□□□ 0.71
CLCN2-222ENST00000638134 ZSCAN20P17040 1043 aaPredicted RBP19.47■□□□□ 0.71
CLCN2-222ENST00000638134 PANK1Q8TE04 598 aa19.47■□□□□ 0.71
CLCN2-222ENST00000638134 SPINK5Q9NQ38 1064 aaPredicted RBP19.47■□□□□ 0.71
CLCN2-222ENST00000638134 GOLGA6L22H0YM25 854 aa19.46■□□□□ 0.71
CLCN2-222ENST00000638134 KLHL40Q2TBA0 621 aa19.46■□□□□ 0.71
CLCN2-222ENST00000638134 PDLIM2Q96JY6 352 aa19.46■□□□□ 0.71
CLCN2-222ENST00000638134 SBNO2Q9Y2G9 1366 aa19.46■□□□□ 0.71
CLCN2-222ENST00000638134 MFAP1P55081 439 aaKnown RBP19.45■□□□□ 0.7
CLCN2-222ENST00000638134 ZNF445P59923 1031 aa19.45■□□□□ 0.7
CLCN2-222ENST00000638134 NALCNQ8IZF0 1738 aa19.45■□□□□ 0.7
CLCN2-222ENST00000638134 RBM25P49756 843 aaKnown RBP19.45■□□□□ 0.7
CLCN2-222ENST00000638134 CDK19Q9BWU1 502 aa19.45■□□□□ 0.7
CLCN2-222ENST00000638134 PCDHB15Q9Y5E8 787 aa19.45■□□□□ 0.7
CLCN2-222ENST00000638134 TMEM94Q12767 1356 aa19.44■□□□□ 0.7
CLCN2-222ENST00000638134 C14orf37Q86TY3 774 aa19.44■□□□□ 0.7
CLCN2-222ENST00000638134 SRPK2P78362 688 aaKnown RBP19.43■□□□□ 0.7
CLCN2-222ENST00000638134 ZKSCAN5Q9Y2L8 839 aa19.43■□□□□ 0.7
CLCN2-222ENST00000638134 EVC2Q86UK5 1308 aa19.43■□□□□ 0.7
CLCN2-222ENST00000638134 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.43■□□□□ 0.7
CLCN2-222ENST00000638134 NPC1L1Q9UHC9 1359 aa19.42■□□□□ 0.7
CLCN2-222ENST00000638134 WASLO00401 505 aaPredicted RBP19.42■□□□□ 0.7
CLCN2-222ENST00000638134 KNSTRNQ9Y448 316 aa19.42■□□□□ 0.7
CLCN2-222ENST00000638134 XIRP1Q702N8 1843 aaKnown RBP19.41■□□□□ 0.7
CLCN2-222ENST00000638134 LETM1O95202 739 aaPredicted RBP19.41■□□□□ 0.7
CLCN2-222ENST00000638134 XPCQ01831 940 aaPredicted RBP19.4■□□□□ 0.7
CLCN2-222ENST00000638134 BBXQ8WY36 941 aaPredicted RBP19.4■□□□□ 0.7
CLCN2-222ENST00000638134 PRDM10Q9NQV6 1147 aa19.4■□□□□ 0.7
CLCN2-222ENST00000638134 LRRC7Q96NW7 1537 aa19.4■□□□□ 0.7
CLCN2-222ENST00000638134 APAF1O14727 1248 aa19.4■□□□□ 0.7
CLCN2-222ENST00000638134 HSP90AB1P08238 724 aaKnown RBP19.4■□□□□ 0.7
CLCN2-222ENST00000638134 AMER1Q5JTC6 1135 aaPredicted RBP19.39■□□□□ 0.69
CLCN2-222ENST00000638134 PRR36Q9H6K5 1346 aa19.38■□□□□ 0.69
CLCN2-222ENST00000638134 PPP4R3BQ5MIZ7 849 aa19.38■□□□□ 0.69
CLCN2-222ENST00000638134 ADGRL3Q9HAR2 1447 aa19.38■□□□□ 0.69
CLCN2-222ENST00000638134 GTF2E1P29083 439 aaPredicted RBP19.37■□□□□ 0.69
CLCN2-222ENST00000638134 DDX49Q9Y6V7 483 aaKnown RBP19.37■□□□□ 0.69
CLCN2-222ENST00000638134 ADGRB2O60241 1585 aa19.37■□□□□ 0.69
CLCN2-222ENST00000638134 SLC12A5Q9H2X9 1139 aa19.37■□□□□ 0.69
CLCN2-222ENST00000638134 TAF3Q5VWG9 929 aa19.36■□□□□ 0.69
CLCN2-222ENST00000638134 CCDC39Q9UFE4 941 aa19.36■□□□□ 0.69
CLCN2-222ENST00000638134 RGPD8O14715 1765 aaPredicted RBP19.36■□□□□ 0.69
CLCN2-222ENST00000638134 LTBP4Q8N2S1 1624 aa19.36■□□□□ 0.69
CLCN2-222ENST00000638134 CCDC146Q8IYE0 955 aa19.36■□□□□ 0.69
CLCN2-222ENST00000638134 MYOM1P52179 1685 aa19.35■□□□□ 0.69
CLCN2-222ENST00000638134 RARSP54136 660 aaKnown RBP19.34■□□□□ 0.69
CLCN2-222ENST00000638134 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
CLCN2-222ENST00000638134 CDCA8Q53HL2 280 aa19.34■□□□□ 0.69
CLCN2-222ENST00000638134 MYRIPQ8NFW9 859 aa19.34■□□□□ 0.69
CLCN2-222ENST00000638134 C19orf44Q9H6X5 657 aa19.33■□□□□ 0.69
CLCN2-222ENST00000638134 CABP1Q9NZU7 370 aa19.33■□□□□ 0.69
CLCN2-222ENST00000638134 ATP7BP35670 1465 aa19.33■□□□□ 0.68
CLCN2-222ENST00000638134 USP32Q8NFA0 1604 aa19.33■□□□□ 0.68
CLCN2-222ENST00000638134 PRIMPOLQ96LW4 560 aa19.31■□□□□ 0.68
CLCN2-222ENST00000638134 CDC42BPGQ6DT37 1551 aa19.31■□□□□ 0.68
CLCN2-222ENST00000638134 FMN2Q9NZ56 1722 aa19.31■□□□□ 0.68
CLCN2-222ENST00000638134 BAG4O95429 457 aaKnown RBP19.31■□□□□ 0.68
CLCN2-222ENST00000638134 RLBP1P12271 317 aa19.31■□□□□ 0.68
CLCN2-222ENST00000638134 K7ELQ4 463 aaPredicted RBP19.3■□□□□ 0.68
CLCN2-222ENST00000638134 GTF2F1P35269 517 aaKnown RBP eCLIP19.3■□□□□ 0.68
CLCN2-222ENST00000638134 ZSCAN23Q3MJ62 389 aa19.3■□□□□ 0.68
CLCN2-222ENST00000638134 HMGN5P82970 282 aaKnown RBP19.3■□□□□ 0.68
CLCN2-222ENST00000638134 HDAC1Q13547 482 aaPredicted RBP19.3■□□□□ 0.68
CLCN2-222ENST00000638134 WWC1Q8IX03 1113 aa19.3■□□□□ 0.68
CLCN2-222ENST00000638134 ARID3AQ99856 593 aa19.3■□□□□ 0.68
CLCN2-222ENST00000638134 PDIA4P13667 645 aaKnown RBP19.29■□□□□ 0.68
CLCN2-222ENST00000638134 RBSNQ9H1K0 784 aa19.29■□□□□ 0.68
CLCN2-222ENST00000638134 MSH6P52701 1360 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms