RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 DCAF8Q5TAQ9 597 aa10.02□□□□□ -0.8
CLN5-217ENST00000637278 DDRGK1Q96HY6 314 aa10.02□□□□□ -0.8
CLN5-217ENST00000637278 POLR3EQ9NVU0 708 aa10.02□□□□□ -0.8
CLN5-217ENST00000637278 PIK3C2BO00750 1634 aa10.02□□□□□ -0.81
CLN5-217ENST00000637278 ADGRB3O60242 1522 aa10.02□□□□□ -0.81
CLN5-217ENST00000637278 CALD1Q05682 793 aaKnown RBP10.02□□□□□ -0.81
CLN5-217ENST00000637278 ZNF622Q969S3 477 aaKnown RBP eCLIP10.02□□□□□ -0.81
CLN5-217ENST00000637278 PYGBP11216 843 aa10.01□□□□□ -0.81
CLN5-217ENST00000637278 UBAP1LF5GYI3 381 aa10□□□□□ -0.81
CLN5-217ENST00000637278 MAFGO15525 162 aa10□□□□□ -0.81
CLN5-217ENST00000637278 TOM1O60784 492 aa10□□□□□ -0.81
CLN5-217ENST00000637278 IRX3P78415 501 aaPredicted RBP10□□□□□ -0.81
CLN5-217ENST00000637278 DRC1Q96MC2 740 aa10□□□□□ -0.81
CLN5-217ENST00000637278 GIPC2Q8TF65 315 aa10□□□□□ -0.81
CLN5-217ENST00000637278 GPR37O15354 613 aa10□□□□□ -0.81
CLN5-217ENST00000637278 PHF14O94880 888 aa10□□□□□ -0.81
CLN5-217ENST00000637278 TMEM51Q9NW97 253 aa10□□□□□ -0.81
CLN5-217ENST00000637278 ROCK1Q13464 1354 aa9.99□□□□□ -0.81
CLN5-217ENST00000637278 NOS1P29475 1434 aa9.99□□□□□ -0.81
CLN5-217ENST00000637278 DISP3Q9P2K9 1392 aa9.99□□□□□ -0.81
CLN5-217ENST00000637278 VGFO15240 615 aaPredicted RBP9.99□□□□□ -0.81
CLN5-217ENST00000637278 TMTC2Q8N394 836 aa9.99□□□□□ -0.81
CLN5-217ENST00000637278 ADAMTS19Q8TE59 1207 aa9.99□□□□□ -0.81
CLN5-217ENST00000637278 EID1Q9Y6B2 187 aa9.99□□□□□ -0.81
CLN5-217ENST00000637278 PARNO95453 639 aaKnown RBP9.98□□□□□ -0.81
CLN5-217ENST00000637278 SREK1Q8WXA9 508 aaKnown RBP9.98□□□□□ -0.81
CLN5-217ENST00000637278 NWD1Q149M9 1564 aa9.98□□□□□ -0.81
CLN5-217ENST00000637278 ANKRD50Q9ULJ7 1429 aa9.98□□□□□ -0.81
CLN5-217ENST00000637278 LRRC7Q96NW7 1537 aa9.97□□□□□ -0.81
CLN5-217ENST00000637278 MPNDQ8N594 471 aa9.97□□□□□ -0.81
CLN5-217ENST00000637278 RRP7BPQ9NSQ0 103 aa9.97□□□□□ -0.81
CLN5-217ENST00000637278 IQGAP3Q86VI3 1631 aa9.97□□□□□ -0.81
CLN5-217ENST00000637278 TMEM2Q9UHN6 1383 aa9.97□□□□□ -0.81
CLN5-217ENST00000637278 NKTRP30414 1462 aaKnown RBP9.97□□□□□ -0.81
CLN5-217ENST00000637278 DPH6Q7L8W6 267 aa9.96□□□□□ -0.81
CLN5-217ENST00000637278 FANCIQ9NVI1 1328 aa9.96□□□□□ -0.81
CLN5-217ENST00000637278 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.81
CLN5-217ENST00000637278 STRCP1A6NGW2 1772 aa9.96□□□□□ -0.81
CLN5-217ENST00000637278 RBM47A0AV96 593 aaKnown RBP9.96□□□□□ -0.81
CLN5-217ENST00000637278 NLRP7Q8WX94 980 aa9.96□□□□□ -0.81
CLN5-217ENST00000637278 DIP2AQ14689 1571 aa9.96□□□□□ -0.82
CLN5-217ENST00000637278 MMP14P50281 582 aa9.96□□□□□ -0.82
CLN5-217ENST00000637278 MFRPQ9BY79 579 aa9.95□□□□□ -0.82
CLN5-217ENST00000637278 LARP6Q9BRS8 491 aaKnown RBP9.95□□□□□ -0.82
CLN5-217ENST00000637278 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
CLN5-217ENST00000637278 MYH16Q9H6N6 1097 aa9.94□□□□□ -0.82
CLN5-217ENST00000637278 HDGFP51858 240 aaKnown RBP9.94□□□□□ -0.82
CLN5-217ENST00000637278 MED1Q15648 1581 aaPredicted RBP9.94□□□□□ -0.82
CLN5-217ENST00000637278 CFAP65Q6ZU64 1925 aaKnown RBP9.93□□□□□ -0.82
CLN5-217ENST00000637278 NAALADL2Q58DX5 795 aa9.93□□□□□ -0.82
CLN5-217ENST00000637278 STAG3Q9UJ98 1225 aa9.93□□□□□ -0.82
CLN5-217ENST00000637278 SH3BP1Q9Y3L3 701 aa9.93□□□□□ -0.82
CLN5-217ENST00000637278 ALKQ9UM73 1620 aa9.93□□□□□ -0.82
CLN5-217ENST00000637278 PAX3P23760 479 aa9.93□□□□□ -0.82
CLN5-217ENST00000637278 FOXD4Q12950 439 aaPredicted RBP9.93□□□□□ -0.82
CLN5-217ENST00000637278 HSP90AA1P07900 732 aaKnown RBP9.93□□□□□ -0.82
CLN5-217ENST00000637278 XIRP1Q702N8 1843 aaKnown RBP9.92□□□□□ -0.82
CLN5-217ENST00000637278 ABL2P42684 1182 aa9.92□□□□□ -0.82
CLN5-217ENST00000637278 GIGYF2Q6Y7W6 1299 aaKnown RBP9.92□□□□□ -0.82
CLN5-217ENST00000637278 TMEM131LA2VDJ0 1609 aa9.92□□□□□ -0.82
CLN5-217ENST00000637278 SBNO2Q9Y2G9 1366 aa9.92□□□□□ -0.82
CLN5-217ENST00000637278 RBM46Q8TBY0 533 aaKnown RBP9.91□□□□□ -0.82
CLN5-217ENST00000637278 E9PCH4 1651 aa9.91□□□□□ -0.82
CLN5-217ENST00000637278 NCOA3Q9Y6Q9 1424 aa9.91□□□□□ -0.82
CLN5-217ENST00000637278 NUBP1P53384 320 aa9.91□□□□□ -0.82
CLN5-217ENST00000637278 DNAJC14Q6Y2X3 702 aaPredicted RBP9.91□□□□□ -0.82
CLN5-217ENST00000637278 PLEKHG1Q9ULL1 1385 aa9.91□□□□□ -0.82
CLN5-217ENST00000637278 SOCS7O14512 581 aa9.9□□□□□ -0.82
CLN5-217ENST00000637278 KCNA1Q09470 495 aa9.9□□□□□ -0.82
CLN5-217ENST00000637278 PCMTD1Q96MG8 357 aaPredicted RBP9.9□□□□□ -0.82
CLN5-217ENST00000637278 BCL2L13Q9BXK5 485 aa9.9□□□□□ -0.82
CLN5-217ENST00000637278 ZFYVE9O95405 1425 aa9.9□□□□□ -0.82
CLN5-217ENST00000637278 PSEN1P49768 467 aa9.9□□□□□ -0.82
CLN5-217ENST00000637278 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.9□□□□□ -0.82
CLN5-217ENST00000637278 PNMA2Q9UL42 364 aa9.9□□□□□ -0.82
CLN5-217ENST00000637278 CHIC2Q9UKJ5 165 aa9.89□□□□□ -0.83
CLN5-217ENST00000637278 PIK3R4Q99570 1358 aa9.89□□□□□ -0.83
CLN5-217ENST00000637278 KCNA6P17658 529 aa9.89□□□□□ -0.83
CLN5-217ENST00000637278 SPHKAPQ2M3C7 1700 aa9.88□□□□□ -0.83
CLN5-217ENST00000637278 LTKP29376 864 aa9.88□□□□□ -0.83
CLN5-217ENST00000637278 IDI1Q13907 227 aa9.88□□□□□ -0.83
CLN5-217ENST00000637278 SPTY2D1Q68D10 685 aaPredicted RBP9.88□□□□□ -0.83
CLN5-217ENST00000637278 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
CLN5-217ENST00000637278 G3BP2Q9UN86 482 aaKnown RBP9.88□□□□□ -0.83
CLN5-217ENST00000637278 CHD2O14647 1828 aaKnown RBP9.88□□□□□ -0.83
CLN5-217ENST00000637278 FAM135BQ49AJ0 1406 aa9.88□□□□□ -0.83
CLN5-217ENST00000637278 MYO5BQ9ULV0 1848 aa9.88□□□□□ -0.83
CLN5-217ENST00000637278 TBC1D2BQ9UPU7 963 aa9.88□□□□□ -0.83
CLN5-217ENST00000637278 RIMS2Q9UQ26 1411 aa9.88□□□□□ -0.83
CLN5-217ENST00000637278 TRPM2O94759 1503 aa9.87□□□□□ -0.83
CLN5-217ENST00000637278 CFAP70Q5T0N1 1121 aa9.87□□□□□ -0.83
CLN5-217ENST00000637278 GORABQ5T7V8 394 aa9.87□□□□□ -0.83
CLN5-217ENST00000637278 HSPA1LP34931 641 aa9.87□□□□□ -0.83
CLN5-217ENST00000637278 PIP4K2BP78356 416 aa9.87□□□□□ -0.83
CLN5-217ENST00000637278 SEMA3FQ13275 785 aa9.87□□□□□ -0.83
CLN5-217ENST00000637278 HSP90AB4PQ58FF6 505 aa9.86□□□□□ -0.83
CLN5-217ENST00000637278 AXDND1Q5T1B0 1012 aaPredicted RBP9.86□□□□□ -0.83
CLN5-217ENST00000637278 IQSEC3Q9UPP2 1182 aaPredicted RBP9.86□□□□□ -0.83
CLN5-217ENST00000637278 IRF6O14896 467 aa9.86□□□□□ -0.83
CLN5-217ENST00000637278 RGL3Q3MIN7 710 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms