RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ANKRD45Q5TZF3 282 aa19.27■□□□□ 0.67
CACNA1A-235ENST00000637004 NPATQ14207 1427 aa19.27■□□□□ 0.67
CACNA1A-235ENST00000637004 HSPA2P54652 639 aa19.26■□□□□ 0.67
CACNA1A-235ENST00000637004 NUCB2P80303 420 aa19.26■□□□□ 0.67
CACNA1A-235ENST00000637004 NUTM2DQ5VT03 806 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-235ENST00000637004 RBM10P98175 930 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-235ENST00000637004 CFAP44Q96MT7 982 aa19.26■□□□□ 0.67
CACNA1A-235ENST00000637004 ANKRD36BQ8N2N9 1353 aa19.26■□□□□ 0.67
CACNA1A-235ENST00000637004 NOL7Q9UMY1 257 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-235ENST00000637004 KIF1BO60333 1816 aa19.25■□□□□ 0.67
CACNA1A-235ENST00000637004 U2SURPO15042 1029 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-235ENST00000637004 PDE4CQ08493 712 aa19.25■□□□□ 0.67
CACNA1A-235ENST00000637004 UGGT1Q9NYU2 1555 aa19.25■□□□□ 0.67
CACNA1A-235ENST00000637004 IFT172Q9UG01 1749 aa19.24■□□□□ 0.67
CACNA1A-235ENST00000637004 ZNF428Q96B54 188 aa19.24■□□□□ 0.67
CACNA1A-235ENST00000637004 ZNF500O60304 480 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-235ENST00000637004 FER1L4A9Z1Z3 1794 aa19.24■□□□□ 0.67
CACNA1A-235ENST00000637004 RIPK4P57078 832 aa19.24■□□□□ 0.67
CACNA1A-235ENST00000637004 RBM42Q9BTD8 480 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-235ENST00000637004 CDC45O75419 566 aa19.23■□□□□ 0.67
CACNA1A-235ENST00000637004 RABEP1Q15276 862 aa19.23■□□□□ 0.67
CACNA1A-235ENST00000637004 C14orf93Q9H972 538 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-235ENST00000637004 IDI1Q13907 227 aa19.23■□□□□ 0.67
CACNA1A-235ENST00000637004 BRPF1P55201 1214 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-235ENST00000637004 ADAMTSL3P82987 1691 aa19.22■□□□□ 0.67
CACNA1A-235ENST00000637004 QRICH2Q9H0J4 1663 aa19.22■□□□□ 0.67
CACNA1A-235ENST00000637004 EVC2Q86UK5 1308 aa19.22■□□□□ 0.67
CACNA1A-235ENST00000637004 ZSCAN23Q3MJ62 389 aa19.22■□□□□ 0.67
CACNA1A-235ENST00000637004 PDLIM2Q96JY6 352 aa19.22■□□□□ 0.67
CACNA1A-235ENST00000637004 MCTP1Q6DN14 999 aa19.21■□□□□ 0.67
CACNA1A-235ENST00000637004 CAVIN1Q6NZI2 390 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-235ENST00000637004 MTERF4Q7Z6M4 381 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-235ENST00000637004 STAG3Q9UJ98 1225 aa19.21■□□□□ 0.67
CACNA1A-235ENST00000637004 PPP6R1Q9UPN7 881 aa19.21■□□□□ 0.67
CACNA1A-235ENST00000637004 R3HCC1Q9Y3T6 440 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-235ENST00000637004 ZC3H13Q5T200 1668 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-235ENST00000637004 MED14O60244 1454 aa19.21■□□□□ 0.67
CACNA1A-235ENST00000637004 NCLP19338 710 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-235ENST00000637004 CSPP1Q1MSJ5 1256 aa19.21■□□□□ 0.67
CACNA1A-235ENST00000637004 MCM5P33992 734 aa19.2■□□□□ 0.66
CACNA1A-235ENST00000637004 PPIP5K1Q6PFW1 1433 aa19.2■□□□□ 0.66
CACNA1A-235ENST00000637004 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-235ENST00000637004 CWC22Q9HCG8 908 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-235ENST00000637004 LMBRD1Q9NUN5 540 aa19.19■□□□□ 0.66
CACNA1A-235ENST00000637004 FAM13BQ9NYF5 915 aa19.19■□□□□ 0.66
CACNA1A-235ENST00000637004 ARHGAP45Q92619 1136 aa19.18■□□□□ 0.66
CACNA1A-235ENST00000637004 CYP2E1P05181 493 aaPredicted RBP19.18■□□□□ 0.66
CACNA1A-235ENST00000637004 EFCAB6Q5THR3 1501 aa19.17■□□□□ 0.66
CACNA1A-235ENST00000637004 RBSNQ9H1K0 784 aa19.17■□□□□ 0.66
CACNA1A-235ENST00000637004 ZKSCAN5Q9Y2L8 839 aa19.16■□□□□ 0.66
CACNA1A-235ENST00000637004 ADGRB1O14514 1584 aa19.16■□□□□ 0.66
CACNA1A-235ENST00000637004 ADGRB3O60242 1522 aa19.16■□□□□ 0.66
CACNA1A-235ENST00000637004 MROH2AA6NES4 1674 aa19.16■□□□□ 0.66
CACNA1A-235ENST00000637004 UQCRHLA0A096LP55 91 aa19.15■□□□□ 0.66
CACNA1A-235ENST00000637004 DYNC1I1O14576 645 aa19.15■□□□□ 0.66
CACNA1A-235ENST00000637004 UQCRHP07919 91 aa19.15■□□□□ 0.66
CACNA1A-235ENST00000637004 TMEM132EQ6IEE7 984 aa19.15■□□□□ 0.66
CACNA1A-235ENST00000637004 TNRQ92752 1358 aa19.15■□□□□ 0.66
CACNA1A-235ENST00000637004 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
CACNA1A-235ENST00000637004 PRIM1P49642 420 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-235ENST00000637004 C3P01024 1663 aa19.14■□□□□ 0.65
CACNA1A-235ENST00000637004 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.65
CACNA1A-235ENST00000637004 COL3A1P02461 1466 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-235ENST00000637004 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-235ENST00000637004 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-235ENST00000637004 CCDC39Q9UFE4 941 aa19.14■□□□□ 0.65
CACNA1A-235ENST00000637004 RPGRIP1LQ68CZ1 1315 aa19.13■□□□□ 0.65
CACNA1A-235ENST00000637004 C1orf115Q9H7X2 142 aa19.12■□□□□ 0.65
CACNA1A-235ENST00000637004 DIAPH1O60610 1272 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-235ENST00000637004 ST18O60284 1047 aa19.11■□□□□ 0.65
CACNA1A-235ENST00000637004 PTCH1Q13635 1447 aa19.11■□□□□ 0.65
CACNA1A-235ENST00000637004 PRPF40AO75400 957 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-235ENST00000637004 SIRT2Q8IXJ6 389 aa19.11■□□□□ 0.65
CACNA1A-235ENST00000637004 LRSAM1Q6UWE0 723 aa19.1■□□□□ 0.65
CACNA1A-235ENST00000637004 INTS3Q68E01 1043 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-235ENST00000637004 MRPL50Q8N5N7 158 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-235ENST00000637004 USP26Q9BXU7 913 aa19.1■□□□□ 0.65
CACNA1A-235ENST00000637004 PDIA4P13667 645 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-235ENST00000637004 GSPT1P15170 499 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-235ENST00000637004 SASS6Q6UVJ0 657 aa19.1■□□□□ 0.65
CACNA1A-235ENST00000637004 GGNBP2Q9H3C7 697 aa19.1■□□□□ 0.65
CACNA1A-235ENST00000637004 PRDM4Q9UKN5 801 aa19.1■□□□□ 0.65
CACNA1A-235ENST00000637004 TULP4Q9NRJ4 1543 aa19.09■□□□□ 0.65
CACNA1A-235ENST00000637004 FCHSD2O94868 740 aa19.09■□□□□ 0.65
CACNA1A-235ENST00000637004 CABP2Q9NPB3 220 aa19.09■□□□□ 0.65
CACNA1A-235ENST00000637004 LMTK2Q8IWU2 1503 aa19.09■□□□□ 0.65
CACNA1A-235ENST00000637004 PLEKHM2Q8IWE5 1019 aa19.09■□□□□ 0.65
CACNA1A-235ENST00000637004 A0A1W2PP64 1363 aa19.08■□□□□ 0.65
CACNA1A-235ENST00000637004 ABCC4O15439 1325 aa19.08■□□□□ 0.65
CACNA1A-235ENST00000637004 CASC1Q6TDU7 716 aa19.08■□□□□ 0.65
CACNA1A-235ENST00000637004 GPT2Q8TD30 523 aa19.08■□□□□ 0.65
CACNA1A-235ENST00000637004 VAMP4O75379 141 aa19.08■□□□□ 0.64
CACNA1A-235ENST00000637004 TTC22Q5TAA0 569 aa19.08■□□□□ 0.64
CACNA1A-235ENST00000637004 SMAP1Q8IYB5 467 aaPredicted RBP19.08■□□□□ 0.64
CACNA1A-235ENST00000637004 PKP1Q13835 747 aa19.07■□□□□ 0.64
CACNA1A-235ENST00000637004 MBD3O95983 291 aa19.07■□□□□ 0.64
CACNA1A-235ENST00000637004 PPLO60437 1756 aa19.06■□□□□ 0.64
CACNA1A-235ENST00000637004 RBM27Q9P2N5 1060 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-235ENST00000637004 TERF2IPQ9NYB0 399 aa19.06■□□□□ 0.64
CACNA1A-235ENST00000637004 PNPLA6Q8IY17 1366 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms