RNA–Protein interactions for RNA: ENST00000636721.1

CACNB4-231, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-231	ENST00000636721	USP35	Q9P2H5	1018 aa		12.07	□□□□□ -0.48
CACNB4-231	ENST00000636721	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.07	□□□□□ -0.48
CACNB4-231	ENST00000636721	PAK3	O75914	559 aa	Predicted RBP	12.06	□□□□□ -0.48
CACNB4-231	ENST00000636721	IL13	P35225	146 aa		12.06	□□□□□ -0.48
CACNB4-231	ENST00000636721	GNAI1	P63096	354 aa		12.06	□□□□□ -0.48
CACNB4-231	ENST00000636721	ATF7IP	Q6VMQ6	1270 aa		12.06	□□□□□ -0.48
CACNB4-231	ENST00000636721	PRKAR2B	P31323	418 aa		12.06	□□□□□ -0.48
CACNB4-231	ENST00000636721	RGS3	P49796	1198 aa		12.06	□□□□□ -0.48
CACNB4-231	ENST00000636721	IFT57	Q9NWB7	429 aa		12.06	□□□□□ -0.48
CACNB4-231	ENST00000636721	DAXX	Q9UER7	740 aa	Predicted RBP	12.06	□□□□□ -0.48
CACNB4-231	ENST00000636721	TBX22	Q9Y458	520 aa		12.06	□□□□□ -0.48
CACNB4-231	ENST00000636721	PTCH1	Q13635	1447 aa		12.05	□□□□□ -0.48
CACNB4-231	ENST00000636721	RTL5	Q5HYW3	569 aa	Predicted RBP	12.05	□□□□□ -0.48
CACNB4-231	ENST00000636721	ARHGAP45	Q92619	1136 aa		12.05	□□□□□ -0.48
CACNB4-231	ENST00000636721	ROBO2	Q9HCK4	1378 aa		12.04	□□□□□ -0.48
CACNB4-231	ENST00000636721	KDM4F	A0A1W2PPD8	638 aa		12.04	□□□□□ -0.48
CACNB4-231	ENST00000636721	HDAC1	Q13547	482 aa	Predicted RBP	12.04	□□□□□ -0.48
CACNB4-231	ENST00000636721	SSH1	Q8WYL5	1049 aa		12.04	□□□□□ -0.48
CACNB4-231	ENST00000636721	TTC21A	Q8NDW8	1320 aa		12.04	□□□□□ -0.48
CACNB4-231	ENST00000636721	RLBP1	P12271	317 aa		12.03	□□□□□ -0.48
CACNB4-231	ENST00000636721	NME9	Q86XW9	330 aa		12.03	□□□□□ -0.48
CACNB4-231	ENST00000636721	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.03	□□□□□ -0.48
CACNB4-231	ENST00000636721	TSR2	Q969E8	191 aa	Known RBP	12.03	□□□□□ -0.48
CACNB4-231	ENST00000636721	PIK3R4	Q99570	1358 aa		12.02	□□□□□ -0.48
CACNB4-231	ENST00000636721	TRIM27	P14373	513 aa		12.02	□□□□□ -0.48
CACNB4-231	ENST00000636721	PCDHB15	Q9Y5E8	787 aa		12.02	□□□□□ -0.48
CACNB4-231	ENST00000636721	OVOS2	A0A0J9YW53	1432 aa		12.02	□□□□□ -0.49
CACNB4-231	ENST00000636721	USP6	P35125	1406 aa		12.02	□□□□□ -0.49
CACNB4-231	ENST00000636721	OVOS2	Q6IE36	1432 aa		12.02	□□□□□ -0.49
CACNB4-231	ENST00000636721	TTC21B	Q7Z4L5	1316 aa		12.02	□□□□□ -0.49
CACNB4-231	ENST00000636721	FMN2	Q9NZ56	1722 aa		12.02	□□□□□ -0.49
CACNB4-231	ENST00000636721	BCL2L13	Q9BXK5	485 aa		12.01	□□□□□ -0.49
CACNB4-231	ENST00000636721	UPF2	Q9HAU5	1272 aa	Known RBP	12.01	□□□□□ -0.49
CACNB4-231	ENST00000636721	EMILIN1	Q9Y6C2	1016 aa		12.01	□□□□□ -0.49
CACNB4-231	ENST00000636721	PRR36	Q9H6K5	1346 aa		12.01	□□□□□ -0.49
CACNB4-231	ENST00000636721	USP31	Q70CQ4	1352 aa		12.01	□□□□□ -0.49
CACNB4-231	ENST00000636721	ZNF853	P0CG23	659 aa		12.01	□□□□□ -0.49
CACNB4-231	ENST00000636721	CFAP44	Q96MT7	982 aa		12.01	□□□□□ -0.49
CACNB4-231	ENST00000636721	NOB1	Q9ULX3	412 aa	Known RBP	12.01	□□□□□ -0.49
CACNB4-231	ENST00000636721	KIF24	Q5T7B8	1368 aa		12	□□□□□ -0.49
CACNB4-231	ENST00000636721	RGPD1	P0DJD0	1748 aa		12	□□□□□ -0.49
CACNB4-231	ENST00000636721	XRN1	Q8IZH2	1706 aa	Known RBP	12	□□□□□ -0.49
CACNB4-231	ENST00000636721	ANKAR	Q7Z5J8	1434 aa		12	□□□□□ -0.49
CACNB4-231	ENST00000636721	LTK	P29376	864 aa		12	□□□□□ -0.49
CACNB4-231	ENST00000636721	PDZRN3	Q9UPQ7	1066 aa		12	□□□□□ -0.49
CACNB4-231	ENST00000636721	USP54	Q70EL1	1684 aa		12	□□□□□ -0.49
CACNB4-231	ENST00000636721	ACE	P12821	1306 aa		12	□□□□□ -0.49
CACNB4-231	ENST00000636721	ITPRIP	Q8IWB1	547 aa		11.99	□□□□□ -0.49
CACNB4-231	ENST00000636721	SSH2	Q76I76	1423 aa		11.98	□□□□□ -0.49
CACNB4-231	ENST00000636721	VAMP4	O75379	141 aa		11.98	□□□□□ -0.49
CACNB4-231	ENST00000636721	HMOX1	P09601	288 aa		11.98	□□□□□ -0.49
CACNB4-231	ENST00000636721	SKAP1	Q86WV1	359 aa		11.98	□□□□□ -0.49
CACNB4-231	ENST00000636721	SMC5	Q8IY18	1101 aa		11.98	□□□□□ -0.49
CACNB4-231	ENST00000636721	ZBTB40	Q9NUA8	1239 aa		11.98	□□□□□ -0.49
CACNB4-231	ENST00000636721	CACNA1F	O60840	1977 aa		11.98	□□□□□ -0.49
CACNB4-231	ENST00000636721	PTPRU	Q92729	1446 aa		11.98	□□□□□ -0.49
CACNB4-231	ENST00000636721	BECN1	Q14457	450 aa		11.97	□□□□□ -0.49
CACNB4-231	ENST00000636721	PHACTR3	Q96KR7	559 aa		11.97	□□□□□ -0.49
CACNB4-231	ENST00000636721	API5	Q9BZZ5	524 aa	Known RBP	11.97	□□□□□ -0.49
CACNB4-231	ENST00000636721	EIF5B	O60841	1220 aa	Known RBP	11.96	□□□□□ -0.49
CACNB4-231	ENST00000636721	TMEM57	Q8N5G2	664 aa		11.96	□□□□□ -0.49
CACNB4-231	ENST00000636721	MRPL50	Q8N5N7	158 aa	Known RBP	11.96	□□□□□ -0.49
CACNB4-231	ENST00000636721	TNN	Q9UQP3	1299 aa		11.96	□□□□□ -0.49
CACNB4-231	ENST00000636721	AMOTL2	Q9Y2J4	779 aa		11.96	□□□□□ -0.49
CACNB4-231	ENST00000636721	RGPD8	O14715	1765 aa	Predicted RBP	11.96	□□□□□ -0.49
CACNB4-231	ENST00000636721	ARHGEF10	O15013	1369 aa		11.96	□□□□□ -0.49
CACNB4-231	ENST00000636721	SETD1B	Q9UPS6	1966 aa	Known RBP	11.96	□□□□□ -0.5
CACNB4-231	ENST00000636721	KIAA0232	Q92628	1395 aa		11.95	□□□□□ -0.5
CACNB4-231	ENST00000636721	RRS1	Q15050	365 aa	Known RBP	11.95	□□□□□ -0.5
CACNB4-231	ENST00000636721	TWISTNB	Q3B726	338 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNB4-231	ENST00000636721	GCC1	Q96CN9	775 aa		11.95	□□□□□ -0.5
CACNB4-231	ENST00000636721	MBIP	Q9NS73	344 aa		11.95	□□□□□ -0.5
CACNB4-231	ENST00000636721	ZRANB1	Q9UGI0	708 aa		11.95	□□□□□ -0.5
CACNB4-231	ENST00000636721	SBNO1	A3KN83	1393 aa		11.94	□□□□□ -0.5
CACNB4-231	ENST00000636721	CHD2	O14647	1828 aa	Known RBP	11.94	□□□□□ -0.5
CACNB4-231	ENST00000636721	FLT4	P35916	1363 aa		11.94	□□□□□ -0.5
CACNB4-231	ENST00000636721	EIF4A2	Q14240	407 aa	Known RBP	11.94	□□□□□ -0.5
CACNB4-231	ENST00000636721	NBR1	Q14596	966 aa		11.94	□□□□□ -0.5
CACNB4-231	ENST00000636721	PEAK1	Q9H792	1746 aa		11.94	□□□□□ -0.5
CACNB4-231	ENST00000636721	LAS1L	Q9Y4W2	734 aa	Known RBP	11.94	□□□□□ -0.5
CACNB4-231	ENST00000636721	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNB4-231	ENST00000636721	ABCC4	O15439	1325 aa		11.93	□□□□□ -0.5
CACNB4-231	ENST00000636721	NCKAP5L	Q9HCH0	1330 aa		11.93	□□□□□ -0.5
CACNB4-231	ENST00000636721	FBLN1	P23142	703 aa		11.93	□□□□□ -0.5
CACNB4-231	ENST00000636721	ZNF142	P52746	1687 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNB4-231	ENST00000636721	SLC26A8	Q96RN1	970 aa		11.92	□□□□□ -0.5
CACNB4-231	ENST00000636721	USP19	O94966	1318 aa		11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	ZBTB7B	O15156	539 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	HTATSF1	O43719	755 aa	Known RBP	11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	CEBPA	P49715	358 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	SULT6B1	Q6IMI4	303 aa		11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	NGDN	Q8NEJ9	315 aa	Known RBP	11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	KDR	P35968	1356 aa		11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	PIK3C2A	O00443	1686 aa		11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	SOS1	Q07889	1333 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	CHL1	O00533	1208 aa		11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	NUCB1	Q02818	461 aa		11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	TBC1D32	Q96NH3	1257 aa		11.91	□□□□□ -0.5
CACNB4-231	ENST00000636721	PTPRC	P08575	1304 aa		11.9	□□□□□ -0.5
CACNB4-231	ENST00000636721	DEK	P35659	375 aa	Known RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms