RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 SLC4A3P48751 1232 aa8.59□□□□□ -1.03
CLN5-210ENST00000636520 ATP10BO94823 1461 aa8.59□□□□□ -1.03
CLN5-210ENST00000636520 SYNE3Q6ZMZ3 975 aa8.59□□□□□ -1.03
CLN5-210ENST00000636520 CHMP4CQ96CF2 233 aa8.59□□□□□ -1.03
CLN5-210ENST00000636520 CRACR2BQ8N4Y2 399 aaPredicted RBP8.59□□□□□ -1.03
CLN5-210ENST00000636520 THRAP3Q9Y2W1 955 aaKnown RBP8.59□□□□□ -1.03
CLN5-210ENST00000636520 AKAP17AQ02040 695 aaKnown RBP8.59□□□□□ -1.04
CLN5-210ENST00000636520 CAVIN4Q5BKX8 364 aa8.58□□□□□ -1.04
CLN5-210ENST00000636520 CNBD1Q8NA66 436 aa8.58□□□□□ -1.04
CLN5-210ENST00000636520 G3BP1Q13283 466 aaKnown RBP eCLIP8.58□□□□□ -1.04
CLN5-210ENST00000636520 CCDC34Q96HJ3 373 aa8.58□□□□□ -1.04
CLN5-210ENST00000636520 ZBTB7AO95365 584 aa8.58□□□□□ -1.04
CLN5-210ENST00000636520 FEZ1Q99689 392 aa8.58□□□□□ -1.04
CLN5-210ENST00000636520 TMEM2Q9UHN6 1383 aa8.58□□□□□ -1.04
CLN5-210ENST00000636520 FRAT1Q92837 279 aaPredicted RBP8.58□□□□□ -1.04
CLN5-210ENST00000636520 GLRX3O76003 335 aaKnown RBP8.57□□□□□ -1.04
CLN5-210ENST00000636520 BRDTQ58F21 947 aaPredicted RBP8.57□□□□□ -1.04
CLN5-210ENST00000636520 RBM26Q5T8P6 1007 aaKnown RBP8.57□□□□□ -1.04
CLN5-210ENST00000636520 BRD4O60885 1362 aaPredicted RBP8.57□□□□□ -1.04
CLN5-210ENST00000636520 LDHCP07864 332 aa8.57□□□□□ -1.04
CLN5-210ENST00000636520 EN1Q05925 392 aaPredicted RBP8.57□□□□□ -1.04
CLN5-210ENST00000636520 GCP02774 474 aa8.57□□□□□ -1.04
CLN5-210ENST00000636520 CCDC57Q2TAC2 916 aa8.57□□□□□ -1.04
CLN5-210ENST00000636520 RBM17Q96I25 401 aaKnown RBP8.57□□□□□ -1.04
CLN5-210ENST00000636520 CC2D2BQ6DHV5 1058 aa8.57□□□□□ -1.04
CLN5-210ENST00000636520 C2orf69Q8N8R5 385 aa8.57□□□□□ -1.04
CLN5-210ENST00000636520 NLRP1Q9C000 1473 aa8.57□□□□□ -1.04
CLN5-210ENST00000636520 KIF21AQ7Z4S6 1674 aa8.57□□□□□ -1.04
CLN5-210ENST00000636520 TNIP1Q15025 636 aa8.56□□□□□ -1.04
CLN5-210ENST00000636520 ZNF287Q9HBT7 754 aa8.56□□□□□ -1.04
CLN5-210ENST00000636520 SLC5A4Q9NY91 659 aa8.56□□□□□ -1.04
CLN5-210ENST00000636520 FKBP5Q13451 457 aaPredicted RBP8.56□□□□□ -1.04
CLN5-210ENST00000636520 HSP90AB4PQ58FF6 505 aa8.56□□□□□ -1.04
CLN5-210ENST00000636520 PIM2Q9P1W9 311 aa8.56□□□□□ -1.04
CLN5-210ENST00000636520 FGD6Q6ZV73 1430 aa8.56□□□□□ -1.04
CLN5-210ENST00000636520 IVNS1ABPQ9Y6Y0 642 aa8.56□□□□□ -1.04
CLN5-210ENST00000636520 LRRC9Q6ZRR7 1453 aa8.56□□□□□ -1.04
CLN5-210ENST00000636520 ACEP12821 1306 aa8.56□□□□□ -1.04
CLN5-210ENST00000636520 EHBP1L1Q8N3D4 1523 aa8.56□□□□□ -1.04
CLN5-210ENST00000636520 RALBP1Q15311 655 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 TRMT112Q9UI30 125 aaKnown RBP8.55□□□□□ -1.04
CLN5-210ENST00000636520 PPP1R12BO60237 982 aaPredicted RBP8.55□□□□□ -1.04
CLN5-210ENST00000636520 APPP05067 770 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 L3MBTL2Q969R5 705 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 ORAI2Q96SN7 254 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 CABP5Q9NP86 173 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 PCDH11XQ9BZA7 1347 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 PCDH11YQ9BZA8 1340 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 RIMBP3CA6NJZ7 1639 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 RIMBP3BA6NNM3 1639 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 RIMBP3Q9UFD9 1639 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 HOXD10P28358 340 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 SLC4A8Q2Y0W8 1093 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 CCDC152Q4G0S7 254 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 MCCP23508 829 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 GNAI1P63096 354 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 CPLX2Q6PUV4 134 aaKnown RBP8.55□□□□□ -1.04
CLN5-210ENST00000636520 LPXNO60711 386 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 WASHC4Q2M389 1173 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 SPC25Q9HBM1 224 aa8.55□□□□□ -1.04
CLN5-210ENST00000636520 PIK3R4Q99570 1358 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 CCDC30Q5VVM6 783 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 LRRFIP2Q9Y608 721 aaKnown RBP8.54□□□□□ -1.04
CLN5-210ENST00000636520 CFAP74Q9C0B2 1584 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 PTPRMP28827 1452 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 BTBD11A6QL63 1104 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 IFIT1P09914 478 aaKnown RBP8.54□□□□□ -1.04
CLN5-210ENST00000636520 TMEM132AQ24JP5 1023 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 SULT6B1Q6IMI4 303 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 PRM3Q9NNZ6 103 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 ATP2B2Q01814 1243 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 RNF181Q9P0P0 153 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 HNRNPUQ00839 825 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLN5-210ENST00000636520 PABPC4Q13310 644 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLN5-210ENST00000636520 TNFAIP1Q13829 316 aa8.54□□□□□ -1.04
CLN5-210ENST00000636520 KCNQ2O43526 872 aa8.53□□□□□ -1.04
CLN5-210ENST00000636520 BMS1Q14692 1282 aaKnown RBP8.53□□□□□ -1.04
CLN5-210ENST00000636520 CSADQ9Y600 493 aa8.53□□□□□ -1.04
CLN5-210ENST00000636520 TRPM2O94759 1503 aa8.53□□□□□ -1.04
CLN5-210ENST00000636520 TRDNQ13061 729 aa8.53□□□□□ -1.04
CLN5-210ENST00000636520 SIN3AQ96ST3 1273 aa8.53□□□□□ -1.04
CLN5-210ENST00000636520 MTIF3Q9H2K0 278 aaKnown RBP8.53□□□□□ -1.04
CLN5-210ENST00000636520 ERICH2A1L162 156 aa8.53□□□□□ -1.04
CLN5-210ENST00000636520 ARMC9Q7Z3E5 817 aa8.53□□□□□ -1.04
CLN5-210ENST00000636520 HRCP23327 699 aa8.52□□□□□ -1.04
CLN5-210ENST00000636520 NBPF1Q3BBV0 1214 aa8.52□□□□□ -1.04
CLN5-210ENST00000636520 CCDC174Q6PII3 467 aa8.52□□□□□ -1.04
CLN5-210ENST00000636520 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.52□□□□□ -1.04
CLN5-210ENST00000636520 MAGI3Q5TCQ9 1506 aa8.52□□□□□ -1.04
CLN5-210ENST00000636520 MSL1Q68DK7 614 aa8.52□□□□□ -1.05
CLN5-210ENST00000636520 SCAF11Q99590 1463 aaKnown RBP8.52□□□□□ -1.05
CLN5-210ENST00000636520 C2CD5Q86YS7 1000 aa8.52□□□□□ -1.05
CLN5-210ENST00000636520 KAT6BQ8WYB5 2073 aa8.52□□□□□ -1.05
CLN5-210ENST00000636520 RASSF8Q8NHQ8 419 aa8.52□□□□□ -1.05
CLN5-210ENST00000636520 UTP14AQ9BVJ6 771 aaKnown RBP8.52□□□□□ -1.05
CLN5-210ENST00000636520 GRIPAP1Q4V328 841 aa8.52□□□□□ -1.05
CLN5-210ENST00000636520 NEUROD6Q96NK8 337 aa8.52□□□□□ -1.05
CLN5-210ENST00000636520 NPATQ14207 1427 aa8.51□□□□□ -1.05
CLN5-210ENST00000636520 SLC27A3Q5K4L6 730 aa8.51□□□□□ -1.05
CLN5-210ENST00000636520 VEZTQ9HBM0 779 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms