RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 TSKSQ9UJT2 592 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 BCS1LQ9Y276 419 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 CD2APQ9Y5K6 639 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 METP08581 1390 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 PXDNLA1KZ92 1463 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 CDC42BPGQ6DT37 1551 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 QSER1Q2KHR3 1735 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 PEAK1Q9H792 1746 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 VIRMAQ69YN4 1812 aaKnown RBP2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 TUBGCP6Q96RT7 1819 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 COL24A1Q17RW2 1714 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 LRRC37A3O60309 1634 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 PAPPAQ13219 1627 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 NRXN3Q9Y4C0 1643 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 ATP7BP35670 1465 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 C10orf71Q711Q0 1435 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 PNPLA7Q6ZV29 1317 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 DDB1Q16531 1140 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 RSPH4AQ5TD94 716 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 HIRIP3Q9BW71 556 aaPredicted RBP2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 RNF181Q9P0P0 153 aa2.8□□□□□ -1.96
SYNGAP1-215ENST00000636443 ADAMTS7Q9UKP4 1686 aa2.79□□□□□ -1.96
SYNGAP1-215ENST00000636443 SSH2Q76I76 1423 aa2.79□□□□□ -1.96
SYNGAP1-215ENST00000636443 ZBTB7CA1YPR0 619 aa2.79□□□□□ -1.96
SYNGAP1-215ENST00000636443 PAK3O75914 559 aaPredicted RBP2.79□□□□□ -1.96
SYNGAP1-215ENST00000636443 VEGFAP15692 232 aaPredicted RBP2.79□□□□□ -1.96
SYNGAP1-215ENST00000636443 COL9A1P20849 921 aa2.79□□□□□ -1.96
SYNGAP1-215ENST00000636443 LARP1Q6PKG0 1096 aaKnown RBP2.79□□□□□ -1.96
SYNGAP1-215ENST00000636443 SNX27Q96L92 541 aa2.79□□□□□ -1.96
SYNGAP1-215ENST00000636443 ABT1Q9ULW3 272 aaKnown RBP2.79□□□□□ -1.96
SYNGAP1-215ENST00000636443 HFM1A2PYH4 1435 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 NAIPQ13075 1403 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 CASP8AP2Q9UKL3 1982 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 SBNO1A3KN83 1393 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 BRD4O60885 1362 aaPredicted RBP2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 KIAA0232Q92628 1395 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 ROBO2Q9HCK4 1378 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 TMEM88BA6NKF7 163 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 FCHSD2O94868 740 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 UBTFP17480 764 aaKnown RBP2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 PLA2G5P39877 138 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 ZC3H6P61129 1189 aaKnown RBP2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 CSRNP3Q8WYN3 585 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 ACSBG1Q96GR2 724 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 PRDM6Q9NQX0 595 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 PHF8Q9UPP1 1060 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 THRAP3Q9Y2W1 955 aaKnown RBP2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 RGPD8O14715 1765 aaPredicted RBP2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 FMN2Q9NZ56 1722 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 IQGAP3Q86VI3 1631 aa2.78□□□□□ -1.96
SYNGAP1-215ENST00000636443 CASKIN1Q8WXD9 1431 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 ERBINQ96RT1 1412 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 BTAF1O14981 1849 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 N4BP2Q86UW6 1770 aaPredicted RBP2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 WDR33Q9C0J8 1336 aaKnown RBP2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 KAT6BQ8WYB5 2073 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 NHSQ6T4R5 1651 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 DEFB115Q30KQ5 88 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 CHADLQ6NUI6 762 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 AKT1S1Q96B36 256 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 COL25A1Q9BXS0 654 aaPredicted RBP2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 RRP7BPQ9NSQ0 103 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 TRPM1Q7Z4N2 1603 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 PHRF1Q9P1Y6 1649 aaKnown RBP2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 WNK3Q9BYP7 1800 aa2.77□□□□□ -1.97
SYNGAP1-215ENST00000636443 IFT172Q9UG01 1749 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 GPRASP1Q5JY77 1395 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 MINK1Q8N4C8 1332 aaPredicted RBP2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 KCNQ4P56696 695 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 CCDC24Q8N4L8 307 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 MARCH10Q8NA82 808 aaPredicted RBP2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 RAPGEFL1Q9UHV5 662 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 COLQQ9Y215 455 aaPredicted RBP2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 CUL9Q8IWT3 2517 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 LTBP1Q14766 1721 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 ITSN1Q15811 1721 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 TIAM2Q8IVF5 1701 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 USP6P35125 1406 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 ALS2Q96Q42 1657 aa2.76□□□□□ -1.97
SYNGAP1-215ENST00000636443 CLTCL1P53675 1640 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 ANKRD30BQ9BXX2 1392 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 A0A0G2JLW4 131 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 CA12O43570 354 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 ECE1P42892 770 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 SLC27A3Q5K4L6 730 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 TOM1L2Q6ZVM7 507 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 COL23A1Q86Y22 540 aaPredicted RBP2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 LRRC4BQ9NT99 713 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 STK26Q9P289 416 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 CLEC11AQ9Y240 323 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 CRYBG1Q9Y4K1 1723 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 NRXN1Q9ULB1 1477 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 CRB1P82279 1406 aa2.75□□□□□ -1.97
SYNGAP1-215ENST00000636443 MEGF6O75095 1541 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 KNDC1Q76NI1 1749 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 TRPM3Q9HCF6 1732 aaPredicted RBP2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 TMEM265A0A087WTH1 108 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 GLTPD2A6NH11 291 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 EXOC5O00471 708 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 EAPPQ56P03 285 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms