RNA–Protein interactions for RNA: ENST00000635738.1

CACNB4-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 7,854 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-212ENST00000635738 DDX46Q7L014 1031 aaKnown RBP4.8□□□□□ -1.64
CACNB4-212ENST00000635738 MYH11P35749 1972 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 GCOM1H8Y6P7 765 aaPredicted RBP4.8□□□□□ -1.64
CACNB4-212ENST00000635738 LPXNO60711 386 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 GAS8O95995 478 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 CCDC172P0C7W6 258 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 MYZAPP0CAP1 466 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 SEPT6Q14141 434 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 TTLL12Q14166 644 aaPredicted RBP4.8□□□□□ -1.64
CACNB4-212ENST00000635738 CCDC57Q2TAC2 916 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 SPRYD3Q8NCJ5 442 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 NUCKS1Q9H1E3 243 aaKnown RBP4.8□□□□□ -1.64
CACNB4-212ENST00000635738 ZNF397Q8NF99 534 aaPredicted RBP4.8□□□□□ -1.64
CACNB4-212ENST00000635738 RBM19Q9Y4C8 960 aaKnown RBP4.8□□□□□ -1.64
CACNB4-212ENST00000635738 USH1CQ9Y6N9 552 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 KIAA0100Q14667 2235 aaKnown RBP4.8□□□□□ -1.64
CACNB4-212ENST00000635738 ZNF76P36508 570 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 TAF12Q16514 161 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 WDR63Q8IWG1 891 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 BICD2Q8TD16 824 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 ALS2CR12Q96Q35 445 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 APBB1O00213 710 aa4.8□□□□□ -1.64
CACNB4-212ENST00000635738 ZNF771Q7L3S4 317 aaPredicted RBP4.8□□□□□ -1.64
CACNB4-212ENST00000635738 BBXQ8WY36 941 aaPredicted RBP4.8□□□□□ -1.64
CACNB4-212ENST00000635738 SMG6Q86US8 1419 aaKnown RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 DIAPH1O60610 1272 aaKnown RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 LETM1O95202 739 aaPredicted RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 KIF5AQ12840 1032 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 DAAM2Q86T65 1068 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 CACNA1BQ00975 2339 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 LOC105371045A0A1W2PR82 267 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 MAP3K11Q16584 847 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 MUM1L1Q5H9M0 696 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 CPLX3Q8WVH0 158 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 MYH9P35579 1960 aaKnown RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 SH3BP5O60239 455 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 KINO60870 393 aaKnown RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 CDKL5O76039 1030 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 SDF4Q9BRK5 362 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 NOP58Q9Y2X3 529 aaKnown RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 GGT6Q6P531 493 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 CCDC77Q9BR77 488 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 TMOD4Q9NZQ9 345 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 NOL7Q9UMY1 257 aaKnown RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 SMC1AQ14683 1233 aaKnown RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 BRDTQ58F21 947 aaPredicted RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 COG3Q96JB2 828 aa4.79□□□□□ -1.64
CACNB4-212ENST00000635738 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 ARID1BQ8NFD5 2236 aaPredicted RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 RBM28Q9NW13 759 aaKnown RBP4.79□□□□□ -1.64
CACNB4-212ENST00000635738 PPFIA2O75334 1257 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 FSD2A1L4K1 749 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 NDC80O14777 642 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 PDE3BQ13370 1112 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 CACNA1EQ15878 2313 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 CCDC110Q8TBZ0 833 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 LRRCC1Q9C099 1032 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 MYO1BO43795 1136 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 CTNNA2P26232 953 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 RBM5P52756 815 aaKnown RBP eCLIP4.78□□□□□ -1.64
CACNB4-212ENST00000635738 AAMPQ13685 434 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 TNPO1Q92973 898 aaKnown RBP4.78□□□□□ -1.64
CACNB4-212ENST00000635738 STAC3Q96MF2 364 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 STK26Q9P289 416 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 IKBKGQ9Y6K9 419 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 ASCC3Q8N3C0 2202 aaKnown RBP4.78□□□□□ -1.64
CACNB4-212ENST00000635738 DYNC1I1O14576 645 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 MAP2K1Q02750 393 aaPredicted RBP4.78□□□□□ -1.64
CACNB4-212ENST00000635738 CCDC88CQ9P219 2028 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 EIF2S2P20042 333 aaKnown RBP4.78□□□□□ -1.64
CACNB4-212ENST00000635738 MCM2P49736 904 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 XPCQ01831 940 aaPredicted RBP4.78□□□□□ -1.64
CACNB4-212ENST00000635738 ZSCAN29Q8IWY8 852 aaPredicted RBP4.78□□□□□ -1.64
CACNB4-212ENST00000635738 FAM107BQ9H098 131 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 CLIP2Q9UDT6 1046 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 RAB3GAP2Q9H2M9 1393 aa4.78□□□□□ -1.64
CACNB4-212ENST00000635738 ATP2B2Q01814 1243 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 ELMSAN1Q6PJG2 1045 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 PLCD4Q9BRC7 762 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 KRT23Q9C075 422 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.77□□□□□ -1.65
CACNB4-212ENST00000635738 GPRASP1Q5JY77 1395 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 MAP9Q49MG5 647 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 FMNL3Q8IVF7 1028 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 MSANTD4Q8NCY6 345 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 ZNF396Q96N95 335 aaPredicted RBP4.77□□□□□ -1.65
CACNB4-212ENST00000635738 MIA2Q96PC5 1412 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 GSTTP1A0A1W2PQM5 241 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 SMTNL1A8MU46 457 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 MAP7Q14244 749 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 WASHC4Q2M389 1173 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 KMT5BQ4FZB7 885 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 TAX1BP1Q86VP1 789 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 TAF4BQ92750 862 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 CFAP36Q96G28 342 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 GOLIM4O00461 696 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 USO1O60763 962 aaKnown RBP4.77□□□□□ -1.65
CACNB4-212ENST00000635738 MAP7D1Q3KQU3 841 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 ZNF569Q5MCW4 686 aa4.77□□□□□ -1.65
CACNB4-212ENST00000635738 ANAPC4Q9UJX5 808 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms