RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 WDR17Q8IZU2 1322 aa17.86■□□□□ 0.45
PTPN11-206ENST00000635652 RGPD5Q99666 1765 aa17.86■□□□□ 0.45
PTPN11-206ENST00000635652 DDB1Q16531 1140 aa17.85■□□□□ 0.45
PTPN11-206ENST00000635652 HDGFL2Q7Z4V5 671 aaPredicted RBP17.85■□□□□ 0.45
PTPN11-206ENST00000635652 C11orf95C9JLR9 678 aaPredicted RBP17.84■□□□□ 0.45
PTPN11-206ENST00000635652 TRIM26Q12899 539 aaPredicted RBP17.84■□□□□ 0.45
PTPN11-206ENST00000635652 MON2Q7Z3U7 1717 aa17.84■□□□□ 0.45
PTPN11-206ENST00000635652 PARD3Q8TEW0 1356 aa17.83■□□□□ 0.45
PTPN11-206ENST00000635652 SLC12A5Q9H2X9 1139 aa17.83■□□□□ 0.44
PTPN11-206ENST00000635652 NME9Q86XW9 330 aa17.82■□□□□ 0.44
PTPN11-206ENST00000635652 OVOS2A0A0G2JMS6 1433 aa17.81■□□□□ 0.44
PTPN11-206ENST00000635652 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
PTPN11-206ENST00000635652 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
PTPN11-206ENST00000635652 LRP5O75197 1615 aa17.81■□□□□ 0.44
PTPN11-206ENST00000635652 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
PTPN11-206ENST00000635652 CARD10Q9BWT7 1032 aa17.81■□□□□ 0.44
PTPN11-206ENST00000635652 TERF2IPQ9NYB0 399 aa17.81■□□□□ 0.44
PTPN11-206ENST00000635652 NBPF14Q5TI25 921 aa17.8■□□□□ 0.44
PTPN11-206ENST00000635652 NFAT5O94916 1531 aa17.8■□□□□ 0.44
PTPN11-206ENST00000635652 LRRC37A3O60309 1634 aa17.8■□□□□ 0.44
PTPN11-206ENST00000635652 CD163L1Q9NR16 1453 aa17.79■□□□□ 0.44
PTPN11-206ENST00000635652 USP31Q70CQ4 1352 aa17.79■□□□□ 0.44
PTPN11-206ENST00000635652 ST20-MTHFSA0A0A6YYL1 179 aa17.78■□□□□ 0.44
PTPN11-206ENST00000635652 SBF2Q86WG5 1849 aa17.77■□□□□ 0.44
PTPN11-206ENST00000635652 WNK3Q9BYP7 1800 aa17.77■□□□□ 0.44
PTPN11-206ENST00000635652 EXOC5O00471 708 aa17.77■□□□□ 0.44
PTPN11-206ENST00000635652 MARCH10Q8NA82 808 aaPredicted RBP17.77■□□□□ 0.44
PTPN11-206ENST00000635652 PUS7Q96PZ0 661 aaKnown RBP17.77■□□□□ 0.44
PTPN11-206ENST00000635652 RREB1Q92766 1687 aa17.77■□□□□ 0.43
PTPN11-206ENST00000635652 PEAK1Q9H792 1746 aa17.76■□□□□ 0.43
PTPN11-206ENST00000635652 EDC4Q6P2E9 1401 aaKnown RBP17.76■□□□□ 0.43
PTPN11-206ENST00000635652 A0A1W2PP64 1363 aa17.76■□□□□ 0.43
PTPN11-206ENST00000635652 CCDC7Q96M83 1385 aa17.76■□□□□ 0.43
PTPN11-206ENST00000635652 LTN1O94822 1766 aa17.76■□□□□ 0.43
PTPN11-206ENST00000635652 NUP188Q5SRE5 1749 aa17.75■□□□□ 0.43
PTPN11-206ENST00000635652 SLC24A1O60721 1099 aa17.75■□□□□ 0.43
PTPN11-206ENST00000635652 TESK2Q96S53 571 aa17.75■□□□□ 0.43
PTPN11-206ENST00000635652 BCL11BQ9C0K0 894 aaPredicted RBP17.75■□□□□ 0.43
PTPN11-206ENST00000635652 NLRP2Q9NX02 1062 aa17.75■□□□□ 0.43
PTPN11-206ENST00000635652 USP54Q70EL1 1684 aa17.74■□□□□ 0.43
PTPN11-206ENST00000635652 KAT6BQ8WYB5 2073 aa17.73■□□□□ 0.43
PTPN11-206ENST00000635652 ABCC6O95255 1503 aa17.73■□□□□ 0.43
PTPN11-206ENST00000635652 PLSCR1O15162 318 aa17.73■□□□□ 0.43
PTPN11-206ENST00000635652 PTF1AQ7RTS3 328 aa17.73■□□□□ 0.43
PTPN11-206ENST00000635652 ERBB3P21860 1342 aa17.72■□□□□ 0.43
PTPN11-206ENST00000635652 ANKRD24Q8TF21 1146 aa17.72■□□□□ 0.43
PTPN11-206ENST00000635652 NINLQ9Y2I6 1382 aa17.71■□□□□ 0.43
PTPN11-206ENST00000635652 COG3Q96JB2 828 aa17.7■□□□□ 0.42
PTPN11-206ENST00000635652 IL2RBP14784 551 aa17.69■□□□□ 0.42
PTPN11-206ENST00000635652 BCL9O00512 1426 aa17.69■□□□□ 0.42
PTPN11-206ENST00000635652 TMF1P82094 1093 aa17.68■□□□□ 0.42
PTPN11-206ENST00000635652 TNS2Q63HR2 1409 aa17.68■□□□□ 0.42
PTPN11-206ENST00000635652 LTV1Q96GA3 475 aaPredicted RBP17.68■□□□□ 0.42
PTPN11-206ENST00000635652 RGPD3A6NKT7 1758 aaPredicted RBP17.68■□□□□ 0.42
PTPN11-206ENST00000635652 RGPD4Q7Z3J3 1758 aa17.68■□□□□ 0.42
PTPN11-206ENST00000635652 IP6K1Q92551 441 aa17.67■□□□□ 0.42
PTPN11-206ENST00000635652 USP47Q96K76 1375 aa17.66■□□□□ 0.42
PTPN11-206ENST00000635652 KCNQ2O43526 872 aa17.66■□□□□ 0.42
PTPN11-206ENST00000635652 PROM2Q8N271 834 aa17.66■□□□□ 0.42
PTPN11-206ENST00000635652 ACSBG1Q96GR2 724 aa17.66■□□□□ 0.42
PTPN11-206ENST00000635652 SPON1Q9HCB6 807 aa17.65■□□□□ 0.42
PTPN11-206ENST00000635652 ANKRD36BQ8N2N9 1353 aa17.65■□□□□ 0.42
PTPN11-206ENST00000635652 FBLN1P23142 703 aa17.64■□□□□ 0.41
PTPN11-206ENST00000635652 AMPHP49418 695 aa17.64■□□□□ 0.41
PTPN11-206ENST00000635652 TXNRD1Q16881 649 aa17.64■□□□□ 0.41
PTPN11-206ENST00000635652 ANO8Q9HCE9 1232 aaPredicted RBP17.64■□□□□ 0.41
PTPN11-206ENST00000635652 PPP1R1BQ9UD71 204 aaPredicted RBP17.64■□□□□ 0.41
PTPN11-206ENST00000635652 MAP3K19Q56UN5 1328 aa17.63■□□□□ 0.41
PTPN11-206ENST00000635652 HOXC9P31274 260 aa17.62■□□□□ 0.41
PTPN11-206ENST00000635652 CDCA8Q53HL2 280 aa17.62■□□□□ 0.41
PTPN11-206ENST00000635652 PCGF6Q9BYE7 350 aa17.62■□□□□ 0.41
PTPN11-206ENST00000635652 DDX54Q8TDD1 881 aaKnown RBP17.61■□□□□ 0.41
PTPN11-206ENST00000635652 GGNBP2Q9H3C7 697 aa17.61■□□□□ 0.41
PTPN11-206ENST00000635652 STK32BQ9NY57 414 aa17.61■□□□□ 0.41
PTPN11-206ENST00000635652 FYB1O15117 783 aa17.6■□□□□ 0.41
PTPN11-206ENST00000635652 NHSQ6T4R5 1651 aa17.6■□□□□ 0.41
PTPN11-206ENST00000635652 FAM208AQ9UK61 1670 aaKnown RBP17.6■□□□□ 0.41
PTPN11-206ENST00000635652 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
PTPN11-206ENST00000635652 PDGFDQ9GZP0 370 aaPredicted RBP17.59■□□□□ 0.41
PTPN11-206ENST00000635652 SLC15A2Q16348 729 aa17.58■□□□□ 0.4
PTPN11-206ENST00000635652 TIMELESSQ9UNS1 1208 aa17.58■□□□□ 0.4
PTPN11-206ENST00000635652 ZBTB7AO95365 584 aa17.57■□□□□ 0.4
PTPN11-206ENST00000635652 RGPD2P0DJD1 1756 aa17.57■□□□□ 0.4
PTPN11-206ENST00000635652 BTAF1O14981 1849 aa17.56■□□□□ 0.4
PTPN11-206ENST00000635652 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
PTPN11-206ENST00000635652 ATF5Q9Y2D1 282 aaPredicted RBP17.55■□□□□ 0.4
PTPN11-206ENST00000635652 CASZ1Q86V15 1759 aa17.55■□□□□ 0.4
PTPN11-206ENST00000635652 UTRNP46939 3433 aa17.54■□□□□ 0.4
PTPN11-206ENST00000635652 ZCRB1Q8TBF4 217 aaKnown RBP17.54■□□□□ 0.4
PTPN11-206ENST00000635652 KIF20BQ96Q89 1820 aa17.54■□□□□ 0.4
PTPN11-206ENST00000635652 RTL1A6NKG5 1358 aa17.53■□□□□ 0.4
PTPN11-206ENST00000635652 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
PTPN11-206ENST00000635652 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
PTPN11-206ENST00000635652 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
PTPN11-206ENST00000635652 SMG6Q86US8 1419 aaKnown RBP17.53■□□□□ 0.4
PTPN11-206ENST00000635652 CLSPNQ9HAW4 1339 aa17.52■□□□□ 0.4
PTPN11-206ENST00000635652 PRIM1P49642 420 aaKnown RBP17.52■□□□□ 0.4
PTPN11-206ENST00000635652 USHBP1Q8N6Y0 703 aa17.52■□□□□ 0.4
PTPN11-206ENST00000635652 POLR3GLQ9BT43 218 aa17.52■□□□□ 0.4
PTPN11-206ENST00000635652 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms