RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 L1TD1Q5T7N2 865 aaKnown RBP13.42□□□□□ -0.26
PSPC1-207ENST00000635251 GCC1Q96CN9 775 aa13.42□□□□□ -0.26
PSPC1-207ENST00000635251 COG3Q96JB2 828 aa13.42□□□□□ -0.26
PSPC1-207ENST00000635251 MBIPQ9NS73 344 aa13.42□□□□□ -0.26
PSPC1-207ENST00000635251 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
PSPC1-207ENST00000635251 TWISTNBQ3B726 338 aaPredicted RBP13.42□□□□□ -0.26
PSPC1-207ENST00000635251 PPP6R1Q9UPN7 881 aa13.42□□□□□ -0.26
PSPC1-207ENST00000635251 MAP2P11137 1827 aaKnown RBP13.41□□□□□ -0.26
PSPC1-207ENST00000635251 MCM4P33991 863 aa13.41□□□□□ -0.26
PSPC1-207ENST00000635251 TXNDC2Q86VQ3 553 aa13.41□□□□□ -0.26
PSPC1-207ENST00000635251 EIF5BO60841 1220 aaKnown RBP13.4□□□□□ -0.26
PSPC1-207ENST00000635251 RRS1Q15050 365 aaKnown RBP13.4□□□□□ -0.26
PSPC1-207ENST00000635251 BMP2KLQ5H9B9 411 aa13.4□□□□□ -0.26
PSPC1-207ENST00000635251 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
PSPC1-207ENST00000635251 CPSF1Q10570 1443 aaKnown RBP13.4□□□□□ -0.26
PSPC1-207ENST00000635251 PTCH1Q13635 1447 aa13.4□□□□□ -0.26
PSPC1-207ENST00000635251 RBM25P49756 843 aaKnown RBP13.39□□□□□ -0.27
PSPC1-207ENST00000635251 NUDT16Q96DE0 195 aaKnown RBP13.39□□□□□ -0.27
PSPC1-207ENST00000635251 ARXQ96QS3 562 aa13.39□□□□□ -0.27
PSPC1-207ENST00000635251 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
PSPC1-207ENST00000635251 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
PSPC1-207ENST00000635251 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
PSPC1-207ENST00000635251 ZNF853P0CG23 659 aa13.39□□□□□ -0.27
PSPC1-207ENST00000635251 CFAP44Q96MT7 982 aa13.39□□□□□ -0.27
PSPC1-207ENST00000635251 NCKAP5LQ9HCH0 1330 aa13.39□□□□□ -0.27
PSPC1-207ENST00000635251 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
PSPC1-207ENST00000635251 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.38□□□□□ -0.27
PSPC1-207ENST00000635251 API5Q9BZZ5 524 aaKnown RBP13.38□□□□□ -0.27
PSPC1-207ENST00000635251 GZF1Q9H116 711 aaPredicted RBP13.38□□□□□ -0.27
PSPC1-207ENST00000635251 AATKQ6ZMQ8 1374 aa13.38□□□□□ -0.27
PSPC1-207ENST00000635251 PIK3R4Q99570 1358 aa13.38□□□□□ -0.27
PSPC1-207ENST00000635251 ABCC4O15439 1325 aa13.38□□□□□ -0.27
PSPC1-207ENST00000635251 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
PSPC1-207ENST00000635251 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
PSPC1-207ENST00000635251 C8orf58Q8NAV2 365 aa13.38□□□□□ -0.27
PSPC1-207ENST00000635251 ESF1Q9H501 851 aaKnown RBP13.38□□□□□ -0.27
PSPC1-207ENST00000635251 METP08581 1390 aa13.38□□□□□ -0.27
PSPC1-207ENST00000635251 ANO8Q9HCE9 1232 aaPredicted RBP13.37□□□□□ -0.27
PSPC1-207ENST00000635251 CCDC61Q9Y6R9 512 aa13.37□□□□□ -0.27
PSPC1-207ENST00000635251 AGLP35573 1532 aa13.37□□□□□ -0.27
PSPC1-207ENST00000635251 SETD1AO15047 1707 aaKnown RBP13.37□□□□□ -0.27
PSPC1-207ENST00000635251 GOLGA6L3A6NEY3 463 aa13.37□□□□□ -0.27
PSPC1-207ENST00000635251 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
PSPC1-207ENST00000635251 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
PSPC1-207ENST00000635251 SNX21Q969T3 373 aa13.36□□□□□ -0.27
PSPC1-207ENST00000635251 TRAK2O60296 914 aa13.36□□□□□ -0.27
PSPC1-207ENST00000635251 FAM43AQ8N2R8 423 aa13.36□□□□□ -0.27
PSPC1-207ENST00000635251 REREQ9P2R6 1566 aa13.35□□□□□ -0.27
PSPC1-207ENST00000635251 TSPOAP1O95153 1857 aa13.35□□□□□ -0.27
PSPC1-207ENST00000635251 HSP90AA1P07900 732 aaKnown RBP13.35□□□□□ -0.27
PSPC1-207ENST00000635251 SIRT2Q8IXJ6 389 aa13.35□□□□□ -0.27
PSPC1-207ENST00000635251 CPS1P31327 1500 aa13.35□□□□□ -0.27
PSPC1-207ENST00000635251 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
PSPC1-207ENST00000635251 HDGFP51858 240 aaKnown RBP13.34□□□□□ -0.27
PSPC1-207ENST00000635251 TBC1D9Q6ZT07 1266 aa13.34□□□□□ -0.27
PSPC1-207ENST00000635251 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
PSPC1-207ENST00000635251 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.33□□□□□ -0.28
PSPC1-207ENST00000635251 DIP2BQ9P265 1576 aa13.32□□□□□ -0.28
PSPC1-207ENST00000635251 NRXN3Q9Y4C0 1643 aa13.32□□□□□ -0.28
PSPC1-207ENST00000635251 NCOA3Q9Y6Q9 1424 aa13.32□□□□□ -0.28
PSPC1-207ENST00000635251 CDC45O75419 566 aa13.32□□□□□ -0.28
PSPC1-207ENST00000635251 SULT6B1Q6IMI4 303 aa13.32□□□□□ -0.28
PSPC1-207ENST00000635251 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
PSPC1-207ENST00000635251 FOXD4L1Q9NU39 408 aa13.32□□□□□ -0.28
PSPC1-207ENST00000635251 DLG5Q8TDM6 1919 aa13.32□□□□□ -0.28
PSPC1-207ENST00000635251 EIF4A2Q14240 407 aaKnown RBP13.31□□□□□ -0.28
PSPC1-207ENST00000635251 AEBP1Q8IUX7 1158 aa13.31□□□□□ -0.28
PSPC1-207ENST00000635251 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
PSPC1-207ENST00000635251 MON2Q7Z3U7 1717 aa13.31□□□□□ -0.28
PSPC1-207ENST00000635251 GBP4Q96PP9 640 aa13.3□□□□□ -0.28
PSPC1-207ENST00000635251 KIF2CQ99661 725 aa13.3□□□□□ -0.28
PSPC1-207ENST00000635251 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
PSPC1-207ENST00000635251 KIF24Q5T7B8 1368 aa13.3□□□□□ -0.28
PSPC1-207ENST00000635251 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
PSPC1-207ENST00000635251 XRCC6P12956 609 aaKnown RBP eCLIP13.3□□□□□ -0.28
PSPC1-207ENST00000635251 DDIT3P35638 169 aa13.3□□□□□ -0.28
PSPC1-207ENST00000635251 TNPO1Q92973 898 aaKnown RBP13.3□□□□□ -0.28
PSPC1-207ENST00000635251 PRR36Q9H6K5 1346 aa13.3□□□□□ -0.28
PSPC1-207ENST00000635251 K7ELQ4 463 aaPredicted RBP13.29□□□□□ -0.28
PSPC1-207ENST00000635251 MCM10Q7L590 875 aa13.29□□□□□ -0.28
PSPC1-207ENST00000635251 C3P01024 1663 aa13.29□□□□□ -0.28
PSPC1-207ENST00000635251 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
PSPC1-207ENST00000635251 FSD2A1L4K1 749 aa13.29□□□□□ -0.28
PSPC1-207ENST00000635251 KRT24Q2M2I5 525 aa13.29□□□□□ -0.28
PSPC1-207ENST00000635251 INTS3Q68E01 1043 aaKnown RBP13.29□□□□□ -0.28
PSPC1-207ENST00000635251 PLEKHM2Q8IWE5 1019 aa13.29□□□□□ -0.28
PSPC1-207ENST00000635251 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
PSPC1-207ENST00000635251 DCTPP1Q9H773 170 aa13.29□□□□□ -0.28
PSPC1-207ENST00000635251 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
PSPC1-207ENST00000635251 GSPT1P15170 499 aaKnown RBP13.28□□□□□ -0.28
PSPC1-207ENST00000635251 AKAP12Q02952 1782 aa13.28□□□□□ -0.28
PSPC1-207ENST00000635251 KNDC1Q76NI1 1749 aa13.28□□□□□ -0.28
PSPC1-207ENST00000635251 TECPR2O15040 1411 aa13.28□□□□□ -0.28
PSPC1-207ENST00000635251 SOX12O15370 315 aa13.28□□□□□ -0.28
PSPC1-207ENST00000635251 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
PSPC1-207ENST00000635251 ACEP12821 1306 aa13.27□□□□□ -0.28
PSPC1-207ENST00000635251 RAB3GAP1Q15042 981 aa13.27□□□□□ -0.28
PSPC1-207ENST00000635251 TTC22Q5TAA0 569 aa13.27□□□□□ -0.28
PSPC1-207ENST00000635251 RPAP2Q8IXW5 612 aaPredicted RBP13.27□□□□□ -0.28
PSPC1-207ENST00000635251 ANKRD44Q8N8A2 993 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms