RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 GAS2L2Q8NHY3 880 aa13.83□□□□□ -0.2
COL11A1-211ENST00000635193 EFCAB5A4FU69 1503 aa13.83□□□□□ -0.2
COL11A1-211ENST00000635193 GOLGA6L7A0A1B0GV03 622 aa13.83□□□□□ -0.2
COL11A1-211ENST00000635193 SERPINC1P01008 464 aa13.83□□□□□ -0.2
COL11A1-211ENST00000635193 XBP1P17861 261 aa13.83□□□□□ -0.2
COL11A1-211ENST00000635193 TMCO3Q6UWJ1 677 aa13.83□□□□□ -0.2
COL11A1-211ENST00000635193 UBXN4Q92575 508 aa13.83□□□□□ -0.2
COL11A1-211ENST00000635193 KDM4AO75164 1064 aa13.82□□□□□ -0.2
COL11A1-211ENST00000635193 STK3Q13188 491 aa13.82□□□□□ -0.2
COL11A1-211ENST00000635193 VPS37DQ86XT2 251 aa13.82□□□□□ -0.2
COL11A1-211ENST00000635193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL11A1-211ENST00000635193 GOLGA6L10A6NI86 522 aa13.82□□□□□ -0.2
COL11A1-211ENST00000635193 C11orf95C9JLR9 678 aaPredicted RBP13.82□□□□□ -0.2
COL11A1-211ENST00000635193 TBC1D2Q9BYX2 928 aa13.82□□□□□ -0.2
COL11A1-211ENST00000635193 NUP62CLQ9H1M0 184 aa13.82□□□□□ -0.2
COL11A1-211ENST00000635193 TMEM57Q8N5G2 664 aa13.81□□□□□ -0.2
COL11A1-211ENST00000635193 CCDC102AQ96A19 550 aa13.81□□□□□ -0.2
COL11A1-211ENST00000635193 SRCIN1Q9C0H9 1055 aa13.81□□□□□ -0.2
COL11A1-211ENST00000635193 ME1P48163 572 aa13.81□□□□□ -0.2
COL11A1-211ENST00000635193 C9orf84Q5VXU9 1444 aa13.81□□□□□ -0.2
COL11A1-211ENST00000635193 DYNC1I1O14576 645 aa13.81□□□□□ -0.2
COL11A1-211ENST00000635193 OFD1O75665 1012 aa13.81□□□□□ -0.2
COL11A1-211ENST00000635193 PSME1Q06323 249 aa13.81□□□□□ -0.2
COL11A1-211ENST00000635193 FAM177A1Q8N128 213 aaPredicted RBP13.81□□□□□ -0.2
COL11A1-211ENST00000635193 SPATA32Q96LK8 384 aa13.81□□□□□ -0.2
COL11A1-211ENST00000635193 PLEKHH2Q8IVE3 1493 aa13.8□□□□□ -0.2
COL11A1-211ENST00000635193 RAD21O60216 631 aa13.8□□□□□ -0.2
COL11A1-211ENST00000635193 MAP4K4O95819 1239 aaPredicted RBP13.8□□□□□ -0.2
COL11A1-211ENST00000635193 ATP2B1P20020 1258 aa13.8□□□□□ -0.2
COL11A1-211ENST00000635193 BRPF1P55201 1214 aaPredicted RBP13.8□□□□□ -0.2
COL11A1-211ENST00000635193 PPP4R3BQ5MIZ7 849 aa13.8□□□□□ -0.2
COL11A1-211ENST00000635193 NAIPQ13075 1403 aa13.8□□□□□ -0.2
COL11A1-211ENST00000635193 KIF2AO00139 706 aaPredicted RBP13.8□□□□□ -0.2
COL11A1-211ENST00000635193 JMYQ8N9B5 988 aa13.8□□□□□ -0.2
COL11A1-211ENST00000635193 TRERF1Q96PN7 1200 aa13.8□□□□□ -0.2
COL11A1-211ENST00000635193 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
COL11A1-211ENST00000635193 CLCN1P35523 988 aa13.79□□□□□ -0.2
COL11A1-211ENST00000635193 ZSCAN31Q96LW9 406 aaPredicted RBP13.79□□□□□ -0.2
COL11A1-211ENST00000635193 CENPHQ9H3R5 247 aa13.79□□□□□ -0.2
COL11A1-211ENST00000635193 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
COL11A1-211ENST00000635193 PDRG1Q9NUG6 133 aa13.79□□□□□ -0.2
COL11A1-211ENST00000635193 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
COL11A1-211ENST00000635193 DAPK1P53355 1430 aa13.79□□□□□ -0.2
COL11A1-211ENST00000635193 SART3Q15020 963 aaKnown RBP13.78□□□□□ -0.2
COL11A1-211ENST00000635193 RPAP2Q8IXW5 612 aaPredicted RBP13.78□□□□□ -0.2
COL11A1-211ENST00000635193 TNPO1Q92973 898 aaKnown RBP13.78□□□□□ -0.2
COL11A1-211ENST00000635193 RAPGEF4Q8WZA2 1011 aa13.78□□□□□ -0.2
COL11A1-211ENST00000635193 EVA1CP58658 441 aa13.78□□□□□ -0.2
COL11A1-211ENST00000635193 NKTRP30414 1462 aaKnown RBP13.78□□□□□ -0.2
COL11A1-211ENST00000635193 HMGXB3Q12766 1538 aa13.78□□□□□ -0.2
COL11A1-211ENST00000635193 MCM5P33992 734 aa13.78□□□□□ -0.2
COL11A1-211ENST00000635193 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
COL11A1-211ENST00000635193 PTPN14Q15678 1187 aa13.77□□□□□ -0.2
COL11A1-211ENST00000635193 CEP57L1Q8IYX8 460 aa13.77□□□□□ -0.2
COL11A1-211ENST00000635193 CBFA2T2O43439 604 aa13.77□□□□□ -0.2
COL11A1-211ENST00000635193 EPS15P42566 896 aa13.77□□□□□ -0.2
COL11A1-211ENST00000635193 PIP4K2AP48426 406 aaPredicted RBP13.77□□□□□ -0.2
COL11A1-211ENST00000635193 RARSP54136 660 aaKnown RBP13.77□□□□□ -0.2
COL11A1-211ENST00000635193 PPFIBP1Q86W92 1011 aa13.77□□□□□ -0.2
COL11A1-211ENST00000635193 FAM193AP78312 1265 aa13.77□□□□□ -0.21
COL11A1-211ENST00000635193 MAP3K11Q16584 847 aa13.77□□□□□ -0.21
COL11A1-211ENST00000635193 BLOC1S2Q6QNY1 142 aa13.77□□□□□ -0.21
COL11A1-211ENST00000635193 JAKMIP1Q96N16 626 aaKnown RBP13.77□□□□□ -0.21
COL11A1-211ENST00000635193 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
COL11A1-211ENST00000635193 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.21
COL11A1-211ENST00000635193 CFAP45Q9UL16 551 aa13.77□□□□□ -0.21
COL11A1-211ENST00000635193 SSFA2P28290 1259 aa13.77□□□□□ -0.21
COL11A1-211ENST00000635193 NLRP6P59044 892 aa13.77□□□□□ -0.21
COL11A1-211ENST00000635193 ZRSR2Q15696 482 aaKnown RBP13.77□□□□□ -0.21
COL11A1-211ENST00000635193 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.21
COL11A1-211ENST00000635193 MAGEC2Q9UBF1 373 aaPredicted RBP13.77□□□□□ -0.21
COL11A1-211ENST00000635193 HSP90AB2PQ58FF8 381 aa13.76□□□□□ -0.21
COL11A1-211ENST00000635193 SULT6B1Q6IMI4 303 aa13.76□□□□□ -0.21
COL11A1-211ENST00000635193 TCEAL9Q9UHQ7 104 aa13.76□□□□□ -0.21
COL11A1-211ENST00000635193 NUTM2GQ5VZR2 741 aa13.76□□□□□ -0.21
COL11A1-211ENST00000635193 PRAM1Q96QH2 718 aa13.76□□□□□ -0.21
COL11A1-211ENST00000635193 DACH1Q9UI36 760 aa13.76□□□□□ -0.21
COL11A1-211ENST00000635193 TBC1D2BQ9UPU7 963 aa13.76□□□□□ -0.21
COL11A1-211ENST00000635193 GPATCH11Q8N954 259 aa13.75□□□□□ -0.21
COL11A1-211ENST00000635193 KIF18AQ8NI77 898 aa13.75□□□□□ -0.21
COL11A1-211ENST00000635193 INCENPQ9NQS7 918 aa13.75□□□□□ -0.21
COL11A1-211ENST00000635193 SUPT6HQ7KZ85 1726 aaKnown RBP13.75□□□□□ -0.21
COL11A1-211ENST00000635193 LRPPRCP42704 1394 aaKnown RBP13.75□□□□□ -0.21
COL11A1-211ENST00000635193 GTF2F1P35269 517 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL11A1-211ENST00000635193 CWC27Q6UX04 472 aaKnown RBP13.75□□□□□ -0.21
COL11A1-211ENST00000635193 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
COL11A1-211ENST00000635193 PDIA4P13667 645 aaKnown RBP13.75□□□□□ -0.21
COL11A1-211ENST00000635193 TMPOP42166 694 aaKnown RBP13.75□□□□□ -0.21
COL11A1-211ENST00000635193 AFAP1Q8N556 730 aa13.75□□□□□ -0.21
COL11A1-211ENST00000635193 TIGD1Q96MW7 591 aa13.75□□□□□ -0.21
COL11A1-211ENST00000635193 GBP3Q9H0R5 595 aa13.75□□□□□ -0.21
COL11A1-211ENST00000635193 FYB1O15117 783 aa13.75□□□□□ -0.21
COL11A1-211ENST00000635193 ERLIN2O94905 339 aa13.75□□□□□ -0.21
COL11A1-211ENST00000635193 CCDC181Q5TID7 509 aa13.75□□□□□ -0.21
COL11A1-211ENST00000635193 ZNHIT6Q9NWK9 470 aaKnown RBP13.75□□□□□ -0.21
COL11A1-211ENST00000635193 SHTN1A0MZ66 631 aa13.74□□□□□ -0.21
COL11A1-211ENST00000635193 CCDC183Q5T5S1 534 aa13.74□□□□□ -0.21
COL11A1-211ENST00000635193 TRIM34Q9BYJ4 488 aa13.74□□□□□ -0.21
COL11A1-211ENST00000635193 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
COL11A1-211ENST00000635193 DHX37Q8IY37 1157 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms