RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 CDCA8Q53HL2 280 aa12.89□□□□□ -0.35
SPTAN1-218ENST00000629137 HDGFL2Q7Z4V5 671 aaPredicted RBP12.89□□□□□ -0.35
SPTAN1-218ENST00000629137 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
SPTAN1-218ENST00000629137 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
SPTAN1-218ENST00000629137 AFF2P51816 1311 aa12.88□□□□□ -0.35
SPTAN1-218ENST00000629137 TERF2IPQ9NYB0 399 aa12.88□□□□□ -0.35
SPTAN1-218ENST00000629137 NINLQ9Y2I6 1382 aa12.88□□□□□ -0.35
SPTAN1-218ENST00000629137 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
SPTAN1-218ENST00000629137 POTEAQ6S8J7 498 aa12.87□□□□□ -0.35
SPTAN1-218ENST00000629137 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPTAN1-218ENST00000629137 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
SPTAN1-218ENST00000629137 KIF12Q96FN5 646 aa12.87□□□□□ -0.35
SPTAN1-218ENST00000629137 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
SPTAN1-218ENST00000629137 USP19O94966 1318 aa12.87□□□□□ -0.35
SPTAN1-218ENST00000629137 NLRP6P59044 892 aa12.86□□□□□ -0.35
SPTAN1-218ENST00000629137 NME9Q86XW9 330 aa12.86□□□□□ -0.35
SPTAN1-218ENST00000629137 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
SPTAN1-218ENST00000629137 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
SPTAN1-218ENST00000629137 TTC21AQ8NDW8 1320 aa12.86□□□□□ -0.35
SPTAN1-218ENST00000629137 SLIT3O75094 1523 aa12.85□□□□□ -0.35
SPTAN1-218ENST00000629137 ILDR2Q71H61 639 aa12.85□□□□□ -0.35
SPTAN1-218ENST00000629137 NLRP13Q86W25 1043 aa12.85□□□□□ -0.35
SPTAN1-218ENST00000629137 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
SPTAN1-218ENST00000629137 SLIT2O94813 1529 aa12.84□□□□□ -0.35
SPTAN1-218ENST00000629137 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
SPTAN1-218ENST00000629137 ZC3H6P61129 1189 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-218ENST00000629137 FNBP4Q8N3X1 1017 aaPredicted RBP12.84□□□□□ -0.35
SPTAN1-218ENST00000629137 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
SPTAN1-218ENST00000629137 KIF7Q2M1P5 1343 aa12.84□□□□□ -0.35
SPTAN1-218ENST00000629137 USP54Q70EL1 1684 aa12.83□□□□□ -0.35
SPTAN1-218ENST00000629137 KIAA0232Q92628 1395 aa12.83□□□□□ -0.36
SPTAN1-218ENST00000629137 GCP02774 474 aa12.83□□□□□ -0.36
SPTAN1-218ENST00000629137 CARD14Q9BXL6 1004 aa12.83□□□□□ -0.36
SPTAN1-218ENST00000629137 USP21Q9UK80 565 aa12.83□□□□□ -0.36
SPTAN1-218ENST00000629137 USP31Q70CQ4 1352 aa12.82□□□□□ -0.36
SPTAN1-218ENST00000629137 COL14A1Q05707 1796 aaKnown RBP12.82□□□□□ -0.36
SPTAN1-218ENST00000629137 MAP3K13O43283 966 aa12.82□□□□□ -0.36
SPTAN1-218ENST00000629137 CHRNA2Q15822 529 aa12.82□□□□□ -0.36
SPTAN1-218ENST00000629137 ZNF772Q68DY9 489 aaPredicted RBP12.82□□□□□ -0.36
SPTAN1-218ENST00000629137 IFNLR1Q8IU57 520 aaPredicted RBP12.82□□□□□ -0.36
SPTAN1-218ENST00000629137 NSD3Q9BZ95 1437 aa12.81□□□□□ -0.36
SPTAN1-218ENST00000629137 SOX12O15370 315 aa12.81□□□□□ -0.36
SPTAN1-218ENST00000629137 NRAPQ86VF7 1730 aa12.81□□□□□ -0.36
SPTAN1-218ENST00000629137 OVOS2A0A0J9YW53 1432 aa12.8□□□□□ -0.36
SPTAN1-218ENST00000629137 OVOS2Q6IE36 1432 aa12.8□□□□□ -0.36
SPTAN1-218ENST00000629137 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.8□□□□□ -0.36
SPTAN1-218ENST00000629137 NWD2Q9ULI1 1742 aa12.8□□□□□ -0.36
SPTAN1-218ENST00000629137 NFAT5O94916 1531 aa12.8□□□□□ -0.36
SPTAN1-218ENST00000629137 QTRT2Q9H974 415 aaKnown RBP12.8□□□□□ -0.36
SPTAN1-218ENST00000629137 PRDM11Q9NQV5 511 aa12.8□□□□□ -0.36
SPTAN1-218ENST00000629137 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
SPTAN1-218ENST00000629137 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
SPTAN1-218ENST00000629137 ATRNO75882 1429 aa12.79□□□□□ -0.36
SPTAN1-218ENST00000629137 KIF20BQ96Q89 1820 aa12.79□□□□□ -0.36
SPTAN1-218ENST00000629137 ZBTB7CA1YPR0 619 aa12.79□□□□□ -0.36
SPTAN1-218ENST00000629137 FYB1O15117 783 aa12.79□□□□□ -0.36
SPTAN1-218ENST00000629137 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
SPTAN1-218ENST00000629137 PANK3Q9H999 370 aa12.79□□□□□ -0.36
SPTAN1-218ENST00000629137 LMO7Q8WWI1 1683 aa12.79□□□□□ -0.36
SPTAN1-218ENST00000629137 CPDO75976 1380 aa12.79□□□□□ -0.36
SPTAN1-218ENST00000629137 CCDC7Q96M83 1385 aa12.79□□□□□ -0.36
SPTAN1-218ENST00000629137 DCAF8Q5TAQ9 597 aa12.78□□□□□ -0.36
SPTAN1-218ENST00000629137 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
SPTAN1-218ENST00000629137 CAMTA1Q9Y6Y1 1673 aa12.77□□□□□ -0.36
SPTAN1-218ENST00000629137 KCNH5Q8NCM2 988 aa12.77□□□□□ -0.37
SPTAN1-218ENST00000629137 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.37
SPTAN1-218ENST00000629137 TRPC6Q9Y210 931 aa12.77□□□□□ -0.37
SPTAN1-218ENST00000629137 COL18A1P39060 1754 aa12.76□□□□□ -0.37
SPTAN1-218ENST00000629137 FBLN1P23142 703 aa12.76□□□□□ -0.37
SPTAN1-218ENST00000629137 ARHGEF25Q86VW2 580 aa12.76□□□□□ -0.37
SPTAN1-218ENST00000629137 COG3Q96JB2 828 aa12.76□□□□□ -0.37
SPTAN1-218ENST00000629137 GLI3P10071 1580 aa12.76□□□□□ -0.37
SPTAN1-218ENST00000629137 LTN1O94822 1766 aa12.76□□□□□ -0.37
SPTAN1-218ENST00000629137 RXRBP28702 533 aa12.75□□□□□ -0.37
SPTAN1-218ENST00000629137 ZEB1P37275 1124 aaPredicted RBP12.75□□□□□ -0.37
SPTAN1-218ENST00000629137 PELP1Q8IZL8 1130 aaKnown RBP12.75□□□□□ -0.37
SPTAN1-218ENST00000629137 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
SPTAN1-218ENST00000629137 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
SPTAN1-218ENST00000629137 RBM6P78332 1123 aaKnown RBP12.74□□□□□ -0.37
SPTAN1-218ENST00000629137 VPS72Q15906 364 aa12.74□□□□□ -0.37
SPTAN1-218ENST00000629137 GJD4Q96KN9 370 aaPredicted RBP12.74□□□□□ -0.37
SPTAN1-218ENST00000629137 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
SPTAN1-218ENST00000629137 RGPD5Q99666 1765 aa12.74□□□□□ -0.37
SPTAN1-218ENST00000629137 COL5A2P05997 1499 aaPredicted RBP12.73□□□□□ -0.37
SPTAN1-218ENST00000629137 RGS12O14924 1447 aa12.73□□□□□ -0.37
SPTAN1-218ENST00000629137 CCDC9Q9Y3X0 531 aaKnown RBP12.73□□□□□ -0.37
SPTAN1-218ENST00000629137 CGNL1Q0VF96 1302 aa12.72□□□□□ -0.37
SPTAN1-218ENST00000629137 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
SPTAN1-218ENST00000629137 ASTLQ6HA08 431 aaPredicted RBP12.72□□□□□ -0.37
SPTAN1-218ENST00000629137 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-218ENST00000629137 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
SPTAN1-218ENST00000629137 PCDHB13Q9Y5F0 798 aa12.71□□□□□ -0.37
SPTAN1-218ENST00000629137 CDK12Q9NYV4 1490 aaPredicted RBP12.71□□□□□ -0.38
SPTAN1-218ENST00000629137 MAP3K19Q56UN5 1328 aa12.7□□□□□ -0.38
SPTAN1-218ENST00000629137 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
SPTAN1-218ENST00000629137 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
SPTAN1-218ENST00000629137 PER1O15534 1290 aaPredicted RBP12.7□□□□□ -0.38
SPTAN1-218ENST00000629137 PYGBP11216 843 aa12.7□□□□□ -0.38
SPTAN1-218ENST00000629137 EVA1CP58658 441 aa12.7□□□□□ -0.38
SPTAN1-218ENST00000629137 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms