RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 RGPD2P0DJD1 1756 aa15.54■□□□□ 0.08
DDX41-219ENST00000629036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.54■□□□□ 0.08
DDX41-219ENST00000629036 CARD14Q9BXL6 1004 aa15.54■□□□□ 0.08
DDX41-219ENST00000629036 FAM208AQ9UK61 1670 aaKnown RBP15.54■□□□□ 0.08
DDX41-219ENST00000629036 SPATA31A5Q5VU36 1347 aa15.53■□□□□ 0.08
DDX41-219ENST00000629036 SPATA31A7Q8IWB4 1347 aa15.53■□□□□ 0.08
DDX41-219ENST00000629036 CDCA8Q53HL2 280 aa15.53■□□□□ 0.08
DDX41-219ENST00000629036 ARHGEF25Q86VW2 580 aa15.53■□□□□ 0.08
DDX41-219ENST00000629036 CCDC9Q9Y3X0 531 aaKnown RBP15.53■□□□□ 0.08
DDX41-219ENST00000629036 LRRC37A3O60309 1634 aa15.53■□□□□ 0.08
DDX41-219ENST00000629036 NSD3Q9BZ95 1437 aa15.52■□□□□ 0.08
DDX41-219ENST00000629036 ONECUT3O60422 494 aaPredicted RBP15.52■□□□□ 0.08
DDX41-219ENST00000629036 RGPD1P0DJD0 1748 aa15.51■□□□□ 0.07
DDX41-219ENST00000629036 A0A0G2JS52 829 aa15.51■□□□□ 0.07
DDX41-219ENST00000629036 BAG6P46379 1132 aa15.51■□□□□ 0.07
DDX41-219ENST00000629036 MYT1Q01538 1121 aa15.51■□□□□ 0.07
DDX41-219ENST00000629036 MAP2P11137 1827 aaKnown RBP15.51■□□□□ 0.07
DDX41-219ENST00000629036 SPATA31A1Q5TZJ5 1347 aa15.5■□□□□ 0.07
DDX41-219ENST00000629036 R3HDM1Q15032 1099 aaKnown RBP15.5■□□□□ 0.07
DDX41-219ENST00000629036 KRT27Q7Z3Y8 459 aa15.5■□□□□ 0.07
DDX41-219ENST00000629036 AXIN2Q9Y2T1 843 aa15.5■□□□□ 0.07
DDX41-219ENST00000629036 FYB1O15117 783 aa15.49■□□□□ 0.07
DDX41-219ENST00000629036 YY1P25490 414 aa15.49■□□□□ 0.07
DDX41-219ENST00000629036 KIF7Q2M1P5 1343 aa15.48■□□□□ 0.07
DDX41-219ENST00000629036 EN1Q05925 392 aaPredicted RBP15.48■□□□□ 0.07
DDX41-219ENST00000629036 KCNH5Q8NCM2 988 aa15.48■□□□□ 0.07
DDX41-219ENST00000629036 TNS1Q9HBL0 1735 aaKnown RBP15.48■□□□□ 0.07
DDX41-219ENST00000629036 CRB1P82279 1406 aa15.47■□□□□ 0.07
DDX41-219ENST00000629036 SHANK3Q9BYB0 1731 aa15.46■□□□□ 0.07
DDX41-219ENST00000629036 DISP2A7MBM2 1401 aa15.46■□□□□ 0.07
DDX41-219ENST00000629036 SBF2Q86WG5 1849 aa15.46■□□□□ 0.07
DDX41-219ENST00000629036 LARP1Q6PKG0 1096 aaKnown RBP15.46■□□□□ 0.07
DDX41-219ENST00000629036 SOX12O15370 315 aa15.44■□□□□ 0.06
DDX41-219ENST00000629036 FBLN1P23142 703 aa15.44■□□□□ 0.06
DDX41-219ENST00000629036 FAM182BQ5T319 152 aa15.44■□□□□ 0.06
DDX41-219ENST00000629036 STRN4Q9NRL3 753 aa15.44■□□□□ 0.06
DDX41-219ENST00000629036 CCDC7Q96M83 1385 aa15.44■□□□□ 0.06
DDX41-219ENST00000629036 WDR17Q8IZU2 1322 aa15.43■□□□□ 0.06
DDX41-219ENST00000629036 FAM98CQ17RN3 349 aaKnown RBP15.43■□□□□ 0.06
DDX41-219ENST00000629036 GGNBP2Q9H3C7 697 aa15.43■□□□□ 0.06
DDX41-219ENST00000629036 ERBB3P21860 1342 aa15.43■□□□□ 0.06
DDX41-219ENST00000629036 MAP3K19Q56UN5 1328 aa15.43■□□□□ 0.06
DDX41-219ENST00000629036 WASHC2AQ641Q2 1341 aa15.43■□□□□ 0.06
DDX41-219ENST00000629036 RTL1A6NKG5 1358 aa15.42■□□□□ 0.06
DDX41-219ENST00000629036 BARGINQ6ZT62 677 aa15.42■□□□□ 0.06
DDX41-219ENST00000629036 COG3Q96JB2 828 aa15.41■□□□□ 0.06
DDX41-219ENST00000629036 PANK3Q9H999 370 aa15.4■□□□□ 0.06
DDX41-219ENST00000629036 SMG6Q86US8 1419 aaKnown RBP15.4■□□□□ 0.06
DDX41-219ENST00000629036 ZBTB7CA1YPR0 619 aa15.39■□□□□ 0.05
DDX41-219ENST00000629036 EZH2Q15910 746 aaKnown RBP15.39■□□□□ 0.05
DDX41-219ENST00000629036 NCAPD2Q15021 1401 aa15.38■□□□□ 0.05
DDX41-219ENST00000629036 TCP11L2Q8N4U5 519 aa15.38■□□□□ 0.05
DDX41-219ENST00000629036 IP6K1Q92551 441 aa15.38■□□□□ 0.05
DDX41-219ENST00000629036 POLR3GLQ9BT43 218 aa15.38■□□□□ 0.05
DDX41-219ENST00000629036 CGNL1Q0VF96 1302 aa15.38■□□□□ 0.05
DDX41-219ENST00000629036 NSD2O96028 1365 aa15.37■□□□□ 0.05
DDX41-219ENST00000629036 KIF24Q5T7B8 1368 aa15.37■□□□□ 0.05
DDX41-219ENST00000629036 HOXC9P31274 260 aa15.37■□□□□ 0.05
DDX41-219ENST00000629036 CARD10Q9BWT7 1032 aa15.37■□□□□ 0.05
DDX41-219ENST00000629036 THRAP3Q9Y2W1 955 aaKnown RBP15.37■□□□□ 0.05
DDX41-219ENST00000629036 PER1O15534 1290 aaPredicted RBP15.36■□□□□ 0.05
DDX41-219ENST00000629036 EVA1CP58658 441 aa15.36■□□□□ 0.05
DDX41-219ENST00000629036 RRS1Q15050 365 aaKnown RBP15.36■□□□□ 0.05
DDX41-219ENST00000629036 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
DDX41-219ENST00000629036 PKD1L3Q7Z443 1732 aa15.36■□□□□ 0.05
DDX41-219ENST00000629036 TNS2Q63HR2 1409 aa15.35■□□□□ 0.05
DDX41-219ENST00000629036 USP35Q9P2H5 1018 aa15.35■□□□□ 0.05
DDX41-219ENST00000629036 ANKRD24Q8TF21 1146 aa15.34■□□□□ 0.05
DDX41-219ENST00000629036 RREB1Q92766 1687 aa15.34■□□□□ 0.05
DDX41-219ENST00000629036 INSRP06213 1382 aa15.34■□□□□ 0.05
DDX41-219ENST00000629036 FLT4P35916 1363 aa15.34■□□□□ 0.05
DDX41-219ENST00000629036 NUP188Q5SRE5 1749 aa15.34■□□□□ 0.05
DDX41-219ENST00000629036 RGPD3A6NKT7 1758 aaPredicted RBP15.34■□□□□ 0.05
DDX41-219ENST00000629036 RGPD4Q7Z3J3 1758 aa15.34■□□□□ 0.05
DDX41-219ENST00000629036 TOM1L2Q6ZVM7 507 aa15.33■□□□□ 0.04
DDX41-219ENST00000629036 EMILIN1Q9Y6C2 1016 aa15.33■□□□□ 0.04
DDX41-219ENST00000629036 MEGF6O75095 1541 aa15.33■□□□□ 0.04
DDX41-219ENST00000629036 NHSQ6T4R5 1651 aa15.32■□□□□ 0.04
DDX41-219ENST00000629036 PPP1R1BQ9UD71 204 aaPredicted RBP15.32■□□□□ 0.04
DDX41-219ENST00000629036 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
DDX41-219ENST00000629036 TRIM37O94972 964 aa15.31■□□□□ 0.04
DDX41-219ENST00000629036 NPC1L1Q9UHC9 1359 aa15.31■□□□□ 0.04
DDX41-219ENST00000629036 BCL9O00512 1426 aa15.31■□□□□ 0.04
DDX41-219ENST00000629036 HSP90AB2PQ58FF8 381 aa15.3■□□□□ 0.04
DDX41-219ENST00000629036 POLKQ9UBT6 870 aa15.3■□□□□ 0.04
DDX41-219ENST00000629036 DOT1LQ8TEK3 1739 aa15.29■□□□□ 0.04
DDX41-219ENST00000629036 CAMKK2Q96RR4 588 aa15.29■□□□□ 0.04
DDX41-219ENST00000629036 TOGARAM1Q9Y4F4 1720 aa15.29■□□□□ 0.04
DDX41-219ENST00000629036 OVOS2A0A0G2JMS6 1433 aa15.28■□□□□ 0.04
DDX41-219ENST00000629036 APBA3O96018 575 aa15.28■□□□□ 0.04
DDX41-219ENST00000629036 CSB-PGBD3P0DP91 1061 aa15.28■□□□□ 0.04
DDX41-219ENST00000629036 AMPHP49418 695 aa15.28■□□□□ 0.04
DDX41-219ENST00000629036 BTAF1O14981 1849 aa15.28■□□□□ 0.04
DDX41-219ENST00000629036 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.04
DDX41-219ENST00000629036 NBPF6Q5VWK0 638 aa15.27■□□□□ 0.04
DDX41-219ENST00000629036 NBPF4Q96M43 638 aa15.27■□□□□ 0.04
DDX41-219ENST00000629036 MARCH10Q8NA82 808 aaPredicted RBP15.26■□□□□ 0.03
DDX41-219ENST00000629036 LTV1Q96GA3 475 aaPredicted RBP15.26■□□□□ 0.03
DDX41-219ENST00000629036 CDCA7Q9BWT1 371 aaPredicted RBP15.26■□□□□ 0.03
DDX41-219ENST00000629036 NLRP2Q9NX02 1062 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms