RNA–Protein interactions for RNA: ENST00000628375.2

CHD2-215, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 3,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-215ENST00000628375 NRXN3Q9Y4C0 1643 aa8.14□□□□□ -1.11
CHD2-215ENST00000628375 MYOM1P52179 1685 aa8.14□□□□□ -1.11
CHD2-215ENST00000628375 TCERG1O14776 1098 aaKnown RBP8.14□□□□□ -1.11
CHD2-215ENST00000628375 NBPF6Q5VWK0 638 aa8.14□□□□□ -1.11
CHD2-215ENST00000628375 MPRIPQ6WCQ1 1025 aa8.14□□□□□ -1.11
CHD2-215ENST00000628375 NBPF4Q96M43 638 aa8.14□□□□□ -1.11
CHD2-215ENST00000628375 TRIM37O94972 964 aa8.14□□□□□ -1.11
CHD2-215ENST00000628375 POLKQ9UBT6 870 aa8.14□□□□□ -1.11
CHD2-215ENST00000628375 PIK3R4Q99570 1358 aa8.13□□□□□ -1.11
CHD2-215ENST00000628375 SOS2Q07890 1332 aaPredicted RBP8.13□□□□□ -1.11
CHD2-215ENST00000628375 SEPT12Q8IYM1 358 aa8.13□□□□□ -1.11
CHD2-215ENST00000628375 NGEFQ8N5V2 710 aa8.13□□□□□ -1.11
CHD2-215ENST00000628375 LTBP4Q8N2S1 1624 aa8.13□□□□□ -1.11
CHD2-215ENST00000628375 KNDC1Q76NI1 1749 aa8.13□□□□□ -1.11
CHD2-215ENST00000628375 KCNQ2O43526 872 aa8.12□□□□□ -1.11
CHD2-215ENST00000628375 KLHL34Q8N239 644 aa8.12□□□□□ -1.11
CHD2-215ENST00000628375 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.12□□□□□ -1.11
CHD2-215ENST00000628375 PTCD1O75127 700 aaKnown RBP8.12□□□□□ -1.11
CHD2-215ENST00000628375 ATAD2Q6PL18 1390 aa8.12□□□□□ -1.11
CHD2-215ENST00000628375 PIP4K2AP48426 406 aaPredicted RBP8.12□□□□□ -1.11
CHD2-215ENST00000628375 QRICH2Q9H0J4 1663 aa8.12□□□□□ -1.11
CHD2-215ENST00000628375 JCADQ9P266 1359 aa8.11□□□□□ -1.11
CHD2-215ENST00000628375 RAPGEF4Q8WZA2 1011 aa8.11□□□□□ -1.11
CHD2-215ENST00000628375 PPP1R1BQ9UD71 204 aaPredicted RBP8.11□□□□□ -1.11
CHD2-215ENST00000628375 SMG6Q86US8 1419 aaKnown RBP8.11□□□□□ -1.11
CHD2-215ENST00000628375 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.11□□□□□ -1.11
CHD2-215ENST00000628375 PER1O15534 1290 aaPredicted RBP8.1□□□□□ -1.11
CHD2-215ENST00000628375 SIRT1Q96EB6 747 aa8.1□□□□□ -1.11
CHD2-215ENST00000628375 WDR43Q15061 677 aaKnown RBP eCLIP8.1□□□□□ -1.111e-6■■□□□ 11.8
CHD2-215ENST00000628375 AMER1Q5JTC6 1135 aaPredicted RBP8.1□□□□□ -1.11
CHD2-215ENST00000628375 UNC5CLQ8IV45 518 aa8.1□□□□□ -1.11
CHD2-215ENST00000628375 GJD4Q96KN9 370 aaPredicted RBP8.1□□□□□ -1.11
CHD2-215ENST00000628375 EYA1Q99502 592 aa8.1□□□□□ -1.11
CHD2-215ENST00000628375 HOXC9P31274 260 aa8.1□□□□□ -1.11
CHD2-215ENST00000628375 RGPD8O14715 1765 aaPredicted RBP8.09□□□□□ -1.11
CHD2-215ENST00000628375 PSDA5PKW4 1024 aaPredicted RBP8.09□□□□□ -1.11
CHD2-215ENST00000628375 EXOC5O00471 708 aa8.09□□□□□ -1.11
CHD2-215ENST00000628375 ARHGEF25Q86VW2 580 aa8.09□□□□□ -1.11
CHD2-215ENST00000628375 PPP2R1AP30153 589 aa8.09□□□□□ -1.11
CHD2-215ENST00000628375 SLC39A6Q13433 755 aa8.09□□□□□ -1.11
CHD2-215ENST00000628375 EIF4A2Q14240 407 aaKnown RBP8.09□□□□□ -1.11
CHD2-215ENST00000628375 DDB1Q16531 1140 aa8.09□□□□□ -1.11
CHD2-215ENST00000628375 MCM10Q7L590 875 aa8.08□□□□□ -1.12
CHD2-215ENST00000628375 RBM42Q9BTD8 480 aaKnown RBP8.08□□□□□ -1.12
CHD2-215ENST00000628375 ADAMTS8Q9UP79 889 aa8.08□□□□□ -1.12
CHD2-215ENST00000628375 FAM135BQ49AJ0 1406 aa8.08□□□□□ -1.12
CHD2-215ENST00000628375 NKTRP30414 1462 aaKnown RBP8.08□□□□□ -1.12
CHD2-215ENST00000628375 DIAPH1O60610 1272 aaKnown RBP8.08□□□□□ -1.12
CHD2-215ENST00000628375 PRKAR2BP31323 418 aa8.08□□□□□ -1.12
CHD2-215ENST00000628375 KCNH5Q8NCM2 988 aa8.08□□□□□ -1.12
CHD2-215ENST00000628375 PHACTR3Q96KR7 559 aa8.08□□□□□ -1.12
CHD2-215ENST00000628375 PRKRIP1Q9H875 184 aaPredicted RBP8.08□□□□□ -1.12
CHD2-215ENST00000628375 TRPC5Q9UL62 973 aaPredicted RBP8.08□□□□□ -1.12
CHD2-215ENST00000628375 PNPLA6Q8IY17 1366 aa8.08□□□□□ -1.12
CHD2-215ENST00000628375 SBNO2Q9Y2G9 1366 aa8.08□□□□□ -1.12
CHD2-215ENST00000628375 PRIM1P49642 420 aaKnown RBP8.08□□□□□ -1.12
CHD2-215ENST00000628375 EN1Q05925 392 aaPredicted RBP8.08□□□□□ -1.12
CHD2-215ENST00000628375 INSRP06213 1382 aa8.08□□□□□ -1.12
CHD2-215ENST00000628375 DIP2AQ14689 1571 aa8.07□□□□□ -1.12
CHD2-215ENST00000628375 NEFMP07197 916 aa8.07□□□□□ -1.12
CHD2-215ENST00000628375 USP6P35125 1406 aa8.07□□□□□ -1.12
CHD2-215ENST00000628375 APAF1O14727 1248 aa8.07□□□□□ -1.12
CHD2-215ENST00000628375 APBA3O96018 575 aa8.07□□□□□ -1.12
CHD2-215ENST00000628375 CPS1P31327 1500 aa8.07□□□□□ -1.12
CHD2-215ENST00000628375 ATP7BP35670 1465 aa8.07□□□□□ -1.12
CHD2-215ENST00000628375 PTCH1Q13635 1447 aa8.07□□□□□ -1.12
CHD2-215ENST00000628375 CFAP53Q96M91 514 aa8.07□□□□□ -1.12
CHD2-215ENST00000628375 TULP4Q9NRJ4 1543 aa8.07□□□□□ -1.12
CHD2-215ENST00000628375 LGR6Q9HBX8 967 aa8.06□□□□□ -1.12
CHD2-215ENST00000628375 FAM177BA6PVY3 158 aa8.06□□□□□ -1.12
CHD2-215ENST00000628375 ZNF772Q68DY9 489 aaPredicted RBP8.06□□□□□ -1.12
CHD2-215ENST00000628375 ZNF530Q6P9A1 599 aaPredicted RBP8.06□□□□□ -1.12
CHD2-215ENST00000628375 ROBO1Q9Y6N7 1651 aa8.06□□□□□ -1.12
CHD2-215ENST00000628375 CEP350Q5VT06 3117 aa8.06□□□□□ -1.12
CHD2-215ENST00000628375 ANKRD36BQ8N2N9 1353 aa8.05□□□□□ -1.12
CHD2-215ENST00000628375 CHD2O14647 1828 aaKnown RBP8.05□□□□□ -1.12
CHD2-215ENST00000628375 TCP11L2Q8N4U5 519 aa8.05□□□□□ -1.12
CHD2-215ENST00000628375 DLC1Q96QB1 1528 aa8.05□□□□□ -1.12
CHD2-215ENST00000628375 PHF14O94880 888 aa8.05□□□□□ -1.12
CHD2-215ENST00000628375 SF3B2Q13435 895 aaKnown RBP8.05□□□□□ -1.12
CHD2-215ENST00000628375 IP6K1Q92551 441 aa8.05□□□□□ -1.12
CHD2-215ENST00000628375 RBM6P78332 1123 aaKnown RBP8.05□□□□□ -1.12
CHD2-215ENST00000628375 TATP17735 454 aaPredicted RBP8.04□□□□□ -1.12
CHD2-215ENST00000628375 EIF2S2P20042 333 aaKnown RBP8.04□□□□□ -1.12
CHD2-215ENST00000628375 KRT27Q7Z3Y8 459 aa8.04□□□□□ -1.12
CHD2-215ENST00000628375 NFATC2IPQ8NCF5 419 aa8.04□□□□□ -1.12
CHD2-215ENST00000628375 NUDCQ9Y266 331 aa8.04□□□□□ -1.12
CHD2-215ENST00000628375 BCL11BQ9C0K0 894 aaPredicted RBP8.04□□□□□ -1.12
CHD2-215ENST00000628375 USP32Q8NFA0 1604 aa8.04□□□□□ -1.12
CHD2-215ENST00000628375 BRPF3Q9ULD4 1205 aa8.03□□□□□ -1.12
CHD2-215ENST00000628375 TNS3Q68CZ2 1445 aa8.03□□□□□ -1.12
CHD2-215ENST00000628375 IL2RBP14784 551 aa8.03□□□□□ -1.12
CHD2-215ENST00000628375 GSE1Q14687 1217 aa8.03□□□□□ -1.12
CHD2-215ENST00000628375 KRT24Q2M2I5 525 aa8.03□□□□□ -1.12
CHD2-215ENST00000628375 ZCRB1Q8TBF4 217 aaKnown RBP8.03□□□□□ -1.12
CHD2-215ENST00000628375 PODXL2Q9NZ53 605 aa8.03□□□□□ -1.12
CHD2-215ENST00000628375 ANXA1P04083 346 aa8.03□□□□□ -1.12
CHD2-215ENST00000628375 C1orf141Q5JVX7 400 aa8.03□□□□□ -1.12
CHD2-215ENST00000628375 ARHGEF10O15013 1369 aa8.02□□□□□ -1.12
CHD2-215ENST00000628375 ERBB3P21860 1342 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms